NCBI Blast:NM_001824:Homo sapiens creatine kinase, M-type...

Search Parameters
Search parameter name	Search parameter value
Program	blastn
Word size	11
Expect value	0.05
Hitlist size	100
Match/Mismatch scores	2,-3
Gapcosts	5,2
Low Complexity Filter	Yes
Filter string	L;m;
Genetic Code	1

Database
Database parameter name	Database parameter value
Posted date	Jul 1, 2023 4:29 PM
Number of letters	205,041,960,196
Number of sequences	8,377,238
Entrez query	Includes: Excludes: None

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	0.633731	0.625
K	0.408146	0.41
H	0.912438	0.78

Results Statistics
Results Statistics parameter name	Results Statistics parameter value
Length adjustment	39
Effective length of query	1517
Effective length of database	204715247914
Effective search space	310553031085538
Effective search space used	310553031085538

Descriptions

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0 sequences selected

Sequences producing significant alignments:
Select for downloading or viewing reports	Description	Scientific Name	Common Name	Taxid	Max Score	Total Score	Query Cover	E value	Per. Ident	Acc. Len	Accession
1Select seq CP002452.1	Nitratifractor salsuginis DSM 16511, complete genome	Nitratifractor salsuginis DSM 16511	NA	749222	115	115	15%	8e-21	70.16%	2101285	CP002452.1
2Select seq CP002361.1	Oceanithermus profundus DSM 14977, complete genome	Oceanithermus profundus DSM 14977	NA	670487	110	110	7%	3e-19	80.51%	2303940	CP002361.1
3Select seq AP023212.1	Hydrogenimonas urashimensis SSM-sur55 DNA, complete genome	Hydrogenimonas urashimensis	NA	2740515	97.8	97.8	12%	2e-15	70.44%	2297889	AP023212.1
4Select seq CP011308.1	Sulfurovum lithotrophicum strain ATCC BAA-797, complete genome	Sulfurovum lithotrophicum	NA	206403	84.2	84.2	8%	1e-11	74.60%	2217891	CP011308.1
5Select seq CP064964.1	Candidatus Uhrbacteria bacterium isolate Bjer_18-Q3-R1-45_BAT3C.201_fly chromosome, complete genome	Candidatus Uhrbacteria bacterium	NA	2053634	74.3	74.3	15%	2e-08	67.49%	1082254	CP064964.1
6Select seq AP009179.1	Sulfurovum sp. NBC37-1 DNA, complete genome	Sulfurovum sp. NBC37-1	NA	387093	72.5	72.5	7%	9e-08	72.95%	2562277	AP009179.1
7Select seq CP041406.1	Sulfurimonas paralvinellae strain GO25 chromosome, complete genome	Sulfurimonas paralvinellae	NA	317658	66.2	66.2	8%	4e-06	71.43%	2029060	CP041406.1
8Select seq AP024488.1	Desulfoluna sp. ASN36 ASN36 DNA, complete genome	Desulfoluna limicola	NA	2810562	54.5	54.5	8%	0.023	70.00%	6263790	AP024488.1

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- Alignment Scores
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- 50 - 80
- 80 - 200
- >= 200
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  The graphic is an overview of the database sequences aligned to the query sequence. These are represented horizontal bars colored coded by score and showing the extent of the alignment on the query sequence. Separate aligned regions on the same database sequence are connected by a thin grey line. Mousing over an alignment shows the database sequence title. Clicking an alignment displays a box with more details about the alignment and link to the sequence alignment itself in the Alignments section of the report.
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Distribution of the top 8 Blast Hits on 8 subject sequences

Query

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Nitratifractor salsuginis DSM 16511, complete genome

Score:115 Evalue:8e-21

Accession:CP002452.1

Alignment

Oceanithermus profundus DSM 14977, complete genome

Score:110 Evalue:3.4e-19

Accession:CP002361.1

Alignment

Hydrogenimonas urashimensis SSM-sur55 DNA, complete gen..

Score:97 Evalue:2.2e-15

Accession:AP023212.1

Alignment

Sulfurovum lithotrophicum strain ATCC BAA-797, complete..

Score:84 Evalue:1.4e-11

Accession:CP011308.1

Alignment

Candidatus Uhrbacteria bacterium isolate Bjer_18-Q3-R1-..

Score:74 Evalue:2.5e-08

Accession:CP064964.1

Alignment

Sulfurovum sp. NBC37-1 DNA, complete genome

Score:72 Evalue:8.6e-08

Accession:AP009179.1

Alignment

Sulfurimonas paralvinellae strain GO25 chromosome, comp..

Score:66 Evalue:3.6e-06

Accession:CP041406.1

Alignment

Desulfoluna sp. ASN36 ASN36 DNA, complete genome

Score:54 Evalue:0.023

Accession:AP024488.1

Alignment
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- CDS feature
- Line length:
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  Alignment view: Choose how to view alignments. The default "pairwise" view shows how each subject sequence aligns individually to the query sequence. The "query-anchored" view shows how all subject sequences align to the query sequence. For each view type, you can choose to show "identities" (matching residues) as letters or dots. more...
  
  CDS feature: Show annotated coding region and translation. more...
  
  Line length: Number of letters to show on one line in an alignment.
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Reports
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Filter Results

Sequences producing significant alignments

Distribution of the top 8 Blast Hits on 8 subject sequences

Reports