NCBI Blast:gb|GHEE01458953.1|

Search Parameters
Search parameter name	Search parameter value
Program	blastx
Word size	6
Expect value	0.05
Hitlist size	500
Gapcosts	11,1
Matrix	BLOSUM62
Low Complexity Filter	Yes
Filter string	L;
Genetic Code	1
Window Size	40
Threshold	21
Composition-based stats	2

Database
Database parameter name	Database parameter value
Posted date	Dec 13, 2022 3:21 AM
Number of letters	203,259,782,750
Number of sequences	519,036,821
Entrez query	Includes: Excludes: None

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	0.317606	0.267
K	0.133956	0.041
H	0.401215	0.14
Alpha	0.7916	1.9
Alpha_v	4.96466	42.6028
Sigma		43.6362

Job Title

gb|GHEE01458953.1| ...

gb|GHEE01458953.1|

RID

TPY546PV016 Search expires on 01-31 20:03 pm

Download All

Results for

Program

BLASTX

Program version: BLASTX 2.15.0+

Citation

Database

See details

Query ID

GHEE01458953.1

Description

TSA: Tokudaia osimensis strain wild TRINITY_DN352655_c2_g1_i15, transcribed RNA sequence ...

TSA: Tokudaia osimensis strain wild TRINITY_DN352655_c2_g1_i15, transcribed RNA sequence

Molecule type

rna

Query Length

10532

Other reports

MSA viewer

Reports are generated on using all sequences producing significant alignments. To generate reports on a subset of sequences, use the report links in the Descriptions tab while selecting specific sequences.

Filter Results

Compare these results against the new Clustered nr database

Clustered nr is the standard NCBI nr database clustered with each sequence within 90% identity and 90% length to other members of the cluster. Your BLAST search runs against a single representative sequence for each cluster.

The representative is used as a title for the cluster and can be used to fetch all the other members.

Clustered nr is smaller and more compact for searching. Results for a clustered nr search have more taxonomic depth than standard nr results.

Descriptions

select all
0 sequences selected

Sequences producing significant alignments:
Select for downloading or viewing reports	Description	Scientific Name	Common Name	Taxid	Max Score	Total Score	Query Cover	Per. Ident	Acc. Len	Accession
1Select seq ref\|XP_028613290.1\|	neuronal cell adhesion molecule isoform X4 [Grammomys surdaster]	Grammomys surdaster	NA	491861	2408	2408	34%	98.27%	1211	XP_028613290.1
2Select seq ref\|XP_006516026.1\|	neuronal cell adhesion molecule isoform X19 [Mus musculus]	Mus musculus	house mouse	10090	2397	2397	34%	98.02%	1211	XP_006516026.1
3Select seq ref\|XP_021035345.1\|	neuronal cell adhesion molecule isoform X15 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2395	2395	34%	98.02%	1211	XP_021035345.1
4Select seq ref\|XP_017170588.1\|	neuronal cell adhesion molecule isoform X24 [Mus musculus]	Mus musculus	house mouse	10090	2393	2393	34%	97.19%	1205	XP_017170588.1
5Select seq ref\|XP_017170584.1\|	neuronal cell adhesion molecule isoform X18 [Mus musculus]	Mus musculus	house mouse	10090	2391	2391	34%	97.78%	1214	XP_017170584.1
6Select seq ref\|XP_006516025.1\|	neuronal cell adhesion molecule isoform X17 [Mus musculus]	Mus musculus	house mouse	10090	2390	2390	34%	97.70%	1215	XP_006516025.1
7Select seq ref\|XP_029340418.1\|	neuronal cell adhesion molecule isoform X14 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2390	2390	34%	97.78%	1214	XP_029340418.1
8Select seq ref\|XP_029340417.1\|	neuronal cell adhesion molecule isoform X13 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2390	2390	34%	97.70%	1215	XP_029340417.1
9Select seq ref\|XP_036013376.1\|	neuronal cell adhesion molecule isoform X28 [Mus musculus]	Mus musculus	house mouse	10090	2387	2387	34%	96.95%	1208	XP_036013376.1
10Select seq ref\|XP_017170585.1\|	neuronal cell adhesion molecule isoform X26 [Mus musculus]	Mus musculus	house mouse	10090	2387	2387	34%	96.87%	1209	XP_017170585.1
11Select seq ref\|XP_006516024.1\|	neuronal cell adhesion molecule isoform X15 [Mus musculus]	Mus musculus	house mouse	10090	2387	2387	34%	97.45%	1218	XP_006516024.1
12Select seq ref\|XP_017449774.1\|	neuronal cell adhesion molecule isoform X18 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2386	2386	34%	97.61%	1211	XP_017449774.1
13Select seq ref\|XP_031212907.1\|	neuronal cell adhesion molecule isoform X14 [Mastomys coucha]	Mastomys coucha	southern multimammate mouse	35658	2386	2386	34%	97.93%	1206	XP_031212907.1
14Select seq ref\|XP_029340416.1\|	neuronal cell adhesion molecule isoform X12 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2386	2386	34%	97.45%	1218	XP_029340416.1
15Select seq ref\|XP_017449772.1\|	neuronal cell adhesion molecule isoform X16 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2384	2384	34%	96.46%	1215	XP_017449772.1
16Select seq ref\|XP_017449773.1\|	neuronal cell adhesion molecule isoform X17 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2383	2383	34%	97.36%	1214	XP_017449773.1
17Select seq gb\|EDM03352.1\|	rCG62174, isoform CRA_a [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2383	2383	34%	96.70%	1205	EDM03352.1
18Select seq ref\|XP_029396947.1\|	neuronal cell adhesion molecule isoform X15 [Mus pahari]	Mus pahari	shrew mouse	10093	2382	2382	34%	97.53%	1213	XP_029396947.1
19Select seq ref\|XP_036013372.1\|	neuronal cell adhesion molecule isoform X21 [Mus musculus]	Mus musculus	house mouse	10090	2381	2381	34%	96.63%	1212	XP_036013372.1
20Select seq gb\|AAS89823.1\|	neuronal cell adhesion molecule long isoform Nc6 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2380	2380	34%	97.76%	1206	AAS89823.1
21Select seq sp\|P97686.2\|	RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM; AltName: Full=Ankyrin-binding cell adhesion molecule NrCAM; AltName: Full=Neuronal surface protein Bravo; Short=rBravo; AltName: Full=NgCAM-related cell adhesion molecule; Short=Ng-CAM-related; Flags: Precursor [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2380	2380	34%	97.28%	1214	P97686.2
22Select seq ref\|XP_031212906.1\|	neuronal cell adhesion molecule isoform X13 [Mastomys coucha]	Mastomys coucha	southern multimammate mouse	35658	2379	2379	34%	97.68%	1209	XP_031212906.1
23Select seq ref\|XP_029396946.1\|	neuronal cell adhesion molecule isoform X14 [Mus pahari]	Mus pahari	shrew mouse	10093	2379	2379	34%	97.29%	1216	XP_029396946.1
24Select seq gb\|AAB47755.1\|	ankyrin binding cell adhesion molecule NrCAM [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2379	2379	34%	97.36%	1215	AAB47755.1
25Select seq ref\|XP_017449771.1\|	neuronal cell adhesion molecule isoform X15 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2378	2378	34%	96.22%	1218	XP_017449771.1
26Select seq XP_017449770.1	neuronal cell adhesion molecule isoform X22 [Rattus norvegicus]			0	2378	2378	34%	96.14%	1219	XP_017449770.1
27Select seq gb\|AAS89820.1\|	neuronal cell adhesion molecule long isoform Nc1 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2376	2376	34%	97.52%	1209	AAS89820.1
28Select seq ref\|XP_029396945.1\|	neuronal cell adhesion molecule isoform X13 [Mus pahari]	Mus pahari	shrew mouse	10093	2375	2375	34%	97.21%	1217	XP_029396945.1
29Select seq XP_038968619.1	neuronal cell adhesion molecule isoform X21 [Rattus norvegicus]			0	2372	2372	34%	95.91%	1222	XP_038968619.1
30Select seq ref\|XP_029396944.1\|	neuronal cell adhesion molecule isoform X12 [Mus pahari]	Mus pahari	shrew mouse	10093	2370	2370	34%	96.97%	1220	XP_029396944.1
31Select seq ref\|XP_017170587.1\|	neuronal cell adhesion molecule isoform X30 [Mus musculus]	Mus musculus	house mouse	10090	2369	2369	34%	97.19%	1202	XP_017170587.1
32Select seq dbj\|BAC65534.1\|	mKIAA0343 protein [Mus musculus]	Mus musculus	house mouse	10090	2368	2368	34%	95.35%	1202	BAC65534.1
33Select seq ref\|XP_021035346.2\|	neuronal cell adhesion molecule isoform X18 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2367	2367	34%	97.19%	1202	XP_021035346.2
34Select seq ref\|XP_036013377.1\|	neuronal cell adhesion molecule isoform X31 [Mus musculus]	Mus musculus	house mouse	10090	2367	2367	34%	97.19%	1201	XP_036013377.1
35Select seq ref\|XP_036013379.1\|	neuronal cell adhesion molecule isoform X35 [Mus musculus]	Mus musculus	house mouse	10090	2365	2365	34%	96.37%	1196	XP_036013379.1
36Select seq ref\|XP_006516029.1\|	neuronal cell adhesion molecule isoform X32 [Mus musculus]	Mus musculus	house mouse	10090	2365	2365	34%	97.11%	1199	XP_006516029.1
37Select seq ref\|XP_006516027.1\|	neuronal cell adhesion molecule isoform X23 [Mus musculus]	Mus musculus	house mouse	10090	2365	2365	34%	96.87%	1206	XP_006516027.1
38Select seq ref\|XP_036013383.1\|	neuronal cell adhesion molecule isoform X42 [Mus musculus]	Mus musculus	house mouse	10090	2365	2365	34%	96.37%	1195	XP_036013383.1
39Select seq ref\|XP_036013384.1\|	neuronal cell adhesion molecule isoform X44 [Mus musculus]	Mus musculus	house mouse	10090	2364	2364	34%	96.28%	1193	XP_036013384.1
40Select seq ref\|XP_021035347.2\|	neuronal cell adhesion molecule isoform X19 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2363	2363	34%	97.11%	1199	XP_021035347.2
41Select seq ref\|XP_036013375.1\|	neuronal cell adhesion molecule isoform X27 [Mus musculus]	Mus musculus	house mouse	10090	2362	2362	34%	96.95%	1204	XP_036013375.1
42Select seq ref\|XP_036013380.1\|	neuronal cell adhesion molecule isoform X37 [Mus musculus]	Mus musculus	house mouse	10090	2362	2362	34%	96.05%	1200	XP_036013380.1
43Select seq ref\|XP_036013374.1\|	neuronal cell adhesion molecule isoform X25 [Mus musculus]	Mus musculus	house mouse	10090	2362	2362	34%	96.87%	1205	XP_036013374.1
44Select seq ref\|XP_029340419.1\|	neuronal cell adhesion molecule isoform X16 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2361	2361	34%	96.87%	1206	XP_029340419.1
45Select seq ref\|XP_006516028.1\|	neuronal cell adhesion molecule isoform X29 [Mus musculus]	Mus musculus	house mouse	10090	2360	2360	34%	96.79%	1203	XP_006516028.1
46Select seq ref\|XP_028613292.1\|	neuronal cell adhesion molecule isoform X6 [Grammomys surdaster]	Grammomys surdaster	NA	491861	2360	2360	34%	96.78%	1192	XP_028613292.1
47Select seq ref\|XP_029340420.1\|	neuronal cell adhesion molecule isoform X17 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2360	2360	34%	96.79%	1203	XP_029340420.1
48Select seq ref\|XP_036013381.1\|	neuronal cell adhesion molecule isoform X38 [Mus musculus]	Mus musculus	house mouse	10090	2359	2359	34%	96.05%	1199	XP_036013381.1
49Select seq ref\|XP_017449779.1\|	neuronal cell adhesion molecule isoform X21 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2358	2358	34%	96.70%	1202	XP_017449779.1
50Select seq ref\|XP_036013382.1\|	neuronal cell adhesion molecule isoform X40 [Mus musculus]	Mus musculus	house mouse	10090	2358	2358	34%	96.13%	1198	XP_036013382.1
51Select seq ref\|XP_017170590.1\|	neuronal cell adhesion molecule isoform X33 [Mus musculus]	Mus musculus	house mouse	10090	2358	2358	34%	95.97%	1197	XP_017170590.1
52Select seq gb\|AAS89822.1\|	neuronal cell adhesion molecule long isoform Nc3 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2358	2358	34%	97.10%	1198	AAS89822.1
53Select seq ref\|XP_036013371.1\|	neuronal cell adhesion molecule isoform X20 [Mus musculus]	Mus musculus	house mouse	10090	2357	2357	34%	96.63%	1208	XP_036013371.1
54Select seq ref\|XP_017449780.1\|	neuronal cell adhesion molecule isoform X22 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2356	2356	34%	96.61%	1199	XP_017449780.1
55Select seq ref\|XP_034369628.1\|	neuronal cell adhesion molecule isoform X1 [Arvicanthis niloticus]	Arvicanthis niloticus	Nile rat	61156	2355	2355	34%	97.36%	1214	XP_034369628.1
56Select seq ref\|XP_051001331.1\|	neuronal cell adhesion molecule isoform X16 [Acomys russatus]	Acomys russatus	golden spiny mouse	60746	2355	2355	34%	96.20%	1211	XP_051001331.1
57Select seq ref\|XP_029396950.1\|	neuronal cell adhesion molecule isoform X18 [Mus pahari]	Mus pahari	shrew mouse	10093	2355	2355	34%	96.70%	1204	XP_029396950.1
58Select seq ref\|XP_017449777.1\|	neuronal cell adhesion molecule isoform X19 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2353	2353	34%	95.56%	1206	XP_017449777.1
59Select seq ref\|XP_031212908.1\|	neuronal cell adhesion molecule isoform X15 [Mastomys coucha]	Mastomys coucha	southern multimammate mouse	35658	2353	2353	34%	97.01%	1197	XP_031212908.1
60Select seq ref\|XP_029396951.1\|	neuronal cell adhesion molecule isoform X19 [Mus pahari]	Mus pahari	shrew mouse	10093	2352	2352	34%	96.62%	1201	XP_029396951.1
61Select seq ref\|XP_036013378.1\|	neuronal cell adhesion molecule isoform X34 [Mus musculus]	Mus musculus	house mouse	10090	2352	2352	34%	95.81%	1202	XP_036013378.1
62Select seq ref\|XP_031212909.1\|	neuronal cell adhesion molecule isoform X16 [Mastomys coucha]	Mastomys coucha	southern multimammate mouse	35658	2352	2352	34%	96.93%	1194	XP_031212909.1
63Select seq gb\|AAS89821.1\|	neuronal cell adhesion molecule long isoform Nc14 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2351	2351	34%	96.85%	1197	AAS89821.1
64Select seq ref\|XP_017449778.1\|	neuronal cell adhesion molecule isoform X20 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2350	2350	34%	95.47%	1203	XP_017449778.1
65Select seq ref\|XP_034369629.1\|	neuronal cell adhesion molecule isoform X2 [Arvicanthis niloticus]	Arvicanthis niloticus	Nile rat	61156	2350	2350	34%	96.53%	1208	XP_034369629.1
66Select seq XP_017449775.1	neuronal cell adhesion molecule isoform X26 [Rattus norvegicus]			0	2350	2350	34%	95.24%	1210	XP_017449775.1
67Select seq ref\|XP_034369630.1\|	neuronal cell adhesion molecule isoform X3 [Arvicanthis niloticus]	Arvicanthis niloticus	Nile rat	61156	2350	2350	34%	96.62%	1204	XP_034369630.1
68Select seq ref\|XP_021035348.1\|	neuronal cell adhesion molecule isoform X20 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2349	2349	34%	96.53%	1192	XP_021035348.1
69Select seq ref\|XP_051001323.1\|	neuronal cell adhesion molecule isoform X15 [Acomys russatus]	Acomys russatus	golden spiny mouse	60746	2348	2348	34%	95.96%	1214	XP_051001323.1
70Select seq ref\|XP_029396948.1\|	neuronal cell adhesion molecule isoform X16 [Mus pahari]	Mus pahari	shrew mouse	10093	2348	2348	34%	96.38%	1208	XP_029396948.1
71Select seq gb\|AAS89824.1\|	neuronal cell adhesion molecule long isoform Nc7 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2348	2348	34%	96.77%	1194	AAS89824.1
72Select seq ref\|XP_031212917.1\|	neuronal cell adhesion molecule isoform X23 [Mastomys coucha]	Mastomys coucha	southern multimammate mouse	35658	2348	2348	34%	96.02%	1188	XP_031212917.1
73Select seq ref\|XP_029396949.1\|	neuronal cell adhesion molecule isoform X17 [Mus pahari]	Mus pahari	shrew mouse	10093	2346	2346	34%	96.30%	1205	XP_029396949.1
74Select seq XP_017449776.1	neuronal cell adhesion molecule isoform X28 [Rattus norvegicus]			0	2345	2345	34%	95.16%	1207	XP_017449776.1
75Select seq XP_038968621.1	neuronal cell adhesion molecule isoform X33 [Rattus norvegicus]			0	2345	2345	34%	95.39%	1197	XP_038968621.1
76Select seq ref\|XP_015863327.1\|	neuronal cell adhesion molecule isoform X28 [Peromyscus maniculatus bairdii]	Peromyscus maniculatus bairdii	prairie deer mouse	230844	2345	2345	34%	95.46%	1211	XP_015863327.1
77Select seq ref\|XP_034369635.1\|	neuronal cell adhesion molecule isoform X7 [Arvicanthis niloticus]	Arvicanthis niloticus	Nile rat	61156	2344	2344	34%	95.79%	1198	XP_034369635.1
78Select seq ref\|XP_028613289.1\|	neuronal cell adhesion molecule isoform X3 [Grammomys surdaster]	Grammomys surdaster	NA	491861	2343	2343	34%	95.71%	1186	XP_028613289.1
79Select seq ref\|XP_028738565.1\|	neuronal cell adhesion molecule isoform X29 [Peromyscus leucopus]	Peromyscus leucopus	white-footed mouse	10041	2343	2343	34%	95.46%	1211	XP_028738565.1
80Select seq ref\|XP_029340421.1\|	neuronal cell adhesion molecule isoform X21 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2343	2343	34%	96.21%	1196	XP_029340421.1
81Select seq ref\|XP_041514208.1\|	neuronal cell adhesion molecule isoform X21 [Microtus oregoni]	Microtus oregoni	creeping vole	111838	2343	2343	34%	95.70%	1212	XP_041514208.1
82Select seq ref\|XP_028613291.1\|	neuronal cell adhesion molecule isoform X5 [Grammomys surdaster]	Grammomys surdaster	NA	491861	2342	2342	34%	95.62%	1183	XP_028613291.1
83Select seq ref\|XP_038968628.1\|	neuronal cell adhesion molecule isoform X27 [Rattus norvegicus]	Rattus norvegicus	Norway rat	10116	2340	2340	34%	96.12%	1192	XP_038968628.1
84Select seq ref\|XP_036061324.1\|	neuronal cell adhesion molecule isoform X15 [Onychomys torridus]	Onychomys torridus	southern grasshopper mouse	38674	2340	2340	34%	95.69%	1206	XP_036061324.1
85Select seq ref\|XP_015863326.1\|	neuronal cell adhesion molecule isoform X27 [Peromyscus maniculatus bairdii]	Peromyscus maniculatus bairdii	prairie deer mouse	230844	2339	2339	34%	95.22%	1214	XP_015863326.1
86Select seq ref\|XP_017170591.1\|	neuronal cell adhesion molecule isoform X41 [Mus musculus]	Mus musculus	house mouse	10090	2339	2339	34%	96.37%	1192	XP_017170591.1
87Select seq ref\|XP_041514207.1\|	neuronal cell adhesion molecule isoform X20 [Microtus oregoni]	Microtus oregoni	creeping vole	111838	2338	2338	34%	95.46%	1215	XP_041514207.1
88Select seq ref\|XP_028738563.1\|	neuronal cell adhesion molecule isoform X27 [Peromyscus leucopus]	Peromyscus leucopus	white-footed mouse	10041	2338	2338	34%	95.14%	1215	XP_028738563.1
89Select seq ref\|XP_005343873.1\|	neuronal cell adhesion molecule isoform X16 [Microtus ochrogaster]	Microtus ochrogaster	prairie vole	79684	2338	2338	34%	95.37%	1211	XP_005343873.1
90Select seq ref\|NP_001139503.1\|	neuronal cell adhesion molecule isoform 2 precursor [Mus musculus]	Mus musculus	house mouse	10090	2338	2338	34%	95.54%	1186	NP_001139503.1
91Select seq ref\|XP_017170592.1\|	neuronal cell adhesion molecule isoform X43 [Mus musculus]	Mus musculus	house mouse	10090	2338	2338	34%	96.28%	1189	XP_017170592.1
92Select seq ref\|XP_029340422.1\|	neuronal cell adhesion molecule isoform X22 [Mus caroli]	Mus caroli	Ryukyu mouse	10089	2338	2338	34%	95.54%	1186	XP_029340422.1
93Select seq ref\|XP_015863325.1\|	neuronal cell adhesion molecule isoform X26 [Peromyscus maniculatus bairdii]	Peromyscus maniculatus bairdii	prairie deer mouse	230844	2337	2337	34%	95.14%	1215	XP_015863325.1
94Select seq ref\|XP_048271492.1\|	neuronal cell adhesion molecule isoform X28 [Myodes glareolus]	Myodes glareolus	Bank vole	447135	2337	2337	34%	95.29%	1211	XP_048271492.1
95Select seq ref\|XP_028738564.1\|	neuronal cell adhesion molecule isoform X28 [Peromyscus leucopus]	Peromyscus leucopus	white-footed mouse	10041	2336	2336	34%	95.22%	1214	XP_028738564.1
96Select seq ref\|XP_017170589.1\|	neuronal cell adhesion molecule isoform X36 [Mus musculus]	Mus musculus	house mouse	10090	2336	2336	34%	96.05%	1196	XP_017170589.1
97Select seq ref\|XP_036061323.1\|	neuronal cell adhesion molecule isoform X14 [Onychomys torridus]	Onychomys torridus	southern grasshopper mouse	38674	2336	2336	34%	95.45%	1209	XP_036061323.1
98Select seq ref\|XP_006516031.1\|	neuronal cell adhesion molecule isoform X46 [Mus musculus]	Mus musculus	house mouse	10090	2335	2335	34%	95.46%	1183	XP_006516031.1
99Select seq ref\|XP_029396953.1\|	neuronal cell adhesion molecule isoform X20 [Mus pahari]	Mus pahari	shrew mouse	10093	2335	2335	34%	96.04%	1194	XP_029396953.1
100Select seq ref\|XP_036061322.1\|	neuronal cell adhesion molecule isoform X13 [Onychomys torridus]	Onychomys torridus	southern grasshopper mouse	38674	2335	2335	34%	95.37%	1210	XP_036061322.1

- hover to see the title
- click to show alignments
- Show Conserved Domains
- Alignment Scores
- < 40
- 40 - 50
- 50 - 80
- 80 - 200
- >= 200
- Help
  The graphic is an overview of the database sequences aligned to the query sequence. These are represented horizontal bars colored coded by score and showing the extent of the alignment on the query sequence. Separate aligned regions on the same database sequence are connected by a thin grey line. Mousing over an alignment shows the database sequence title. Clicking an alignment displays a box with more details about the alignment and link to the sequence alignment itself in the Alignments section of the report.
- 0 sequences selected
- Help
  To select sequences, go to the Descriptions tab
Distribution of the top 100 Blast Hits on 100 subject sequences

Query

1
2000
4000
6000
8000
10000

neuronal cell adhesion molecule isoform X4 [Grammomys s..

Score:2408 Evalue:0

Accession:XP_028613290.1

Alignment

neuronal cell adhesion molecule isoform X19 [Mus muscul..

Score:2397 Evalue:0

Accession:XP_006516026.1

Alignment

neuronal cell adhesion molecule isoform X15 [Mus caroli..

Score:2395 Evalue:0

Accession:XP_021035345.1

Alignment

neuronal cell adhesion molecule isoform X24 [Mus muscul..

Score:2393 Evalue:0

Accession:XP_017170588.1

Alignment

neuronal cell adhesion molecule isoform X18 [Mus muscul..

Score:2391 Evalue:0

Accession:XP_017170584.1

Alignment

neuronal cell adhesion molecule isoform X17 [Mus muscul..

Score:2390 Evalue:0

Accession:XP_006516025.1

Alignment

neuronal cell adhesion molecule isoform X14 [Mus caroli..

Score:2390 Evalue:0

Accession:XP_029340418.1

Alignment

neuronal cell adhesion molecule isoform X13 [Mus caroli..

Score:2390 Evalue:0

Accession:XP_029340417.1

Alignment

neuronal cell adhesion molecule isoform X28 [Mus muscul..

Score:2387 Evalue:0

Accession:XP_036013376.1

Alignment

neuronal cell adhesion molecule isoform X26 [Mus muscul..

Score:2387 Evalue:0

Accession:XP_017170585.1

Alignment

neuronal cell adhesion molecule isoform X15 [Mus muscul..

Score:2387 Evalue:0

Accession:XP_006516024.1

Alignment

neuronal cell adhesion molecule isoform X18 [Rattus nor..

Score:2386 Evalue:0

Accession:XP_017449774.1

Alignment

neuronal cell adhesion molecule isoform X14 [Mastomys c..

Score:2386 Evalue:0

Accession:XP_031212907.1

Alignment

neuronal cell adhesion molecule isoform X12 [Mus caroli..

Score:2386 Evalue:0

Accession:XP_029340416.1

Alignment

neuronal cell adhesion molecule isoform X16 [Rattus nor..

Score:2384 Evalue:0

Accession:XP_017449772.1

Alignment

neuronal cell adhesion molecule isoform X17 [Rattus nor..

Score:2383 Evalue:0

Accession:XP_017449773.1

Alignment

rCG62174, isoform CRA_a [Rattus norvegicus]

Score:2383 Evalue:0

Accession:EDM03352.1

Alignment

neuronal cell adhesion molecule isoform X15 [Mus pahari..

Score:2382 Evalue:0

Accession:XP_029396947.1

Alignment

neuronal cell adhesion molecule isoform X21 [Mus muscul..

Score:2381 Evalue:0

Accession:XP_036013372.1

Alignment

neuronal cell adhesion molecule long isoform Nc6 [Rattu..

Score:2380 Evalue:0

Accession:AAS89823.1

Alignment

RecName: Full=Neuronal cell adhesion molecule; Short=Nr..

Score:2380 Evalue:0

Accession:P97686.2

Alignment

neuronal cell adhesion molecule isoform X13 [Mastomys c..

Score:2379 Evalue:0

Accession:XP_031212906.1

Alignment

neuronal cell adhesion molecule isoform X14 [Mus pahari..

Score:2379 Evalue:0

Accession:XP_029396946.1

Alignment

ankyrin binding cell adhesion molecule NrCAM [Rattus no..

Score:2379 Evalue:0

Accession:AAB47755.1

Alignment

neuronal cell adhesion molecule isoform X15 [Rattus nor..

Score:2378 Evalue:0

Accession:XP_017449771.1

Alignment

neuronal cell adhesion molecule isoform X22 [Rattus nor..

Score:2378 Evalue:0

Accession:XP_017449770.1

Alignment

neuronal cell adhesion molecule long isoform Nc1 [Rattu..

Score:2376 Evalue:0

Accession:AAS89820.1

Alignment

neuronal cell adhesion molecule isoform X13 [Mus pahari..

Score:2375 Evalue:0

Accession:XP_029396945.1

Alignment

neuronal cell adhesion molecule isoform X21 [Rattus nor..

Score:2372 Evalue:0

Accession:XP_038968619.1

Alignment

neuronal cell adhesion molecule isoform X12 [Mus pahari..

Score:2370 Evalue:0

Accession:XP_029396944.1

Alignment

neuronal cell adhesion molecule isoform X30 [Mus muscul..

Score:2369 Evalue:0

Accession:XP_017170587.1

Alignment

mKIAA0343 protein [Mus musculus]

Score:2368 Evalue:0

Accession:BAC65534.1

Alignment

neuronal cell adhesion molecule isoform X18 [Mus caroli..

Score:2367 Evalue:0

Accession:XP_021035346.2

Alignment

neuronal cell adhesion molecule isoform X31 [Mus muscul..

Score:2367 Evalue:0

Accession:XP_036013377.1

Alignment

neuronal cell adhesion molecule isoform X35 [Mus muscul..

Score:2365 Evalue:0

Accession:XP_036013379.1

Alignment

neuronal cell adhesion molecule isoform X32 [Mus muscul..

Score:2365 Evalue:0

Accession:XP_006516029.1

Alignment

neuronal cell adhesion molecule isoform X23 [Mus muscul..

Score:2365 Evalue:0

Accession:XP_006516027.1

Alignment

neuronal cell adhesion molecule isoform X42 [Mus muscul..

Score:2365 Evalue:0

Accession:XP_036013383.1

Alignment

neuronal cell adhesion molecule isoform X44 [Mus muscul..

Score:2364 Evalue:0

Accession:XP_036013384.1

Alignment

neuronal cell adhesion molecule isoform X19 [Mus caroli..

Score:2363 Evalue:0

Accession:XP_021035347.2

Alignment

neuronal cell adhesion molecule isoform X27 [Mus muscul..

Score:2362 Evalue:0

Accession:XP_036013375.1

Alignment

neuronal cell adhesion molecule isoform X37 [Mus muscul..

Score:2362 Evalue:0

Accession:XP_036013380.1

Alignment

neuronal cell adhesion molecule isoform X25 [Mus muscul..

Score:2362 Evalue:0

Accession:XP_036013374.1

Alignment

neuronal cell adhesion molecule isoform X16 [Mus caroli..

Score:2361 Evalue:0

Accession:XP_029340419.1

Alignment

neuronal cell adhesion molecule isoform X29 [Mus muscul..

Score:2360 Evalue:0

Accession:XP_006516028.1

Alignment

neuronal cell adhesion molecule isoform X6 [Grammomys s..

Score:2360 Evalue:0

Accession:XP_028613292.1

Alignment

neuronal cell adhesion molecule isoform X17 [Mus caroli..

Score:2360 Evalue:0

Accession:XP_029340420.1

Alignment

neuronal cell adhesion molecule isoform X38 [Mus muscul..

Score:2359 Evalue:0

Accession:XP_036013381.1

Alignment

neuronal cell adhesion molecule isoform X21 [Rattus nor..

Score:2358 Evalue:0

Accession:XP_017449779.1

Alignment

neuronal cell adhesion molecule isoform X40 [Mus muscul..

Score:2358 Evalue:0

Accession:XP_036013382.1

Alignment

neuronal cell adhesion molecule isoform X33 [Mus muscul..

Score:2358 Evalue:0

Accession:XP_017170590.1

Alignment

neuronal cell adhesion molecule long isoform Nc3 [Rattu..

Score:2358 Evalue:0

Accession:AAS89822.1

Alignment

neuronal cell adhesion molecule isoform X20 [Mus muscul..

Score:2357 Evalue:0

Accession:XP_036013371.1

Alignment

neuronal cell adhesion molecule isoform X22 [Rattus nor..

Score:2356 Evalue:0

Accession:XP_017449780.1

Alignment

neuronal cell adhesion molecule isoform X1 [Arvicanthis..

Score:2355 Evalue:0

Accession:XP_034369628.1

Alignment

neuronal cell adhesion molecule isoform X16 [Acomys rus..

Score:2355 Evalue:0

Accession:XP_051001331.1

Alignment

neuronal cell adhesion molecule isoform X18 [Mus pahari..

Score:2355 Evalue:0

Accession:XP_029396950.1

Alignment

neuronal cell adhesion molecule isoform X19 [Rattus nor..

Score:2353 Evalue:0

Accession:XP_017449777.1

Alignment

neuronal cell adhesion molecule isoform X15 [Mastomys c..

Score:2353 Evalue:0

Accession:XP_031212908.1

Alignment

neuronal cell adhesion molecule isoform X19 [Mus pahari..

Score:2352 Evalue:0

Accession:XP_029396951.1

Alignment

neuronal cell adhesion molecule isoform X34 [Mus muscul..

Score:2352 Evalue:0

Accession:XP_036013378.1

Alignment

neuronal cell adhesion molecule isoform X16 [Mastomys c..

Score:2352 Evalue:0

Accession:XP_031212909.1

Alignment

neuronal cell adhesion molecule long isoform Nc14 [Ratt..

Score:2351 Evalue:0

Accession:AAS89821.1

Alignment

neuronal cell adhesion molecule isoform X20 [Rattus nor..

Score:2350 Evalue:0

Accession:XP_017449778.1

Alignment

neuronal cell adhesion molecule isoform X2 [Arvicanthis..

Score:2350 Evalue:0

Accession:XP_034369629.1

Alignment

neuronal cell adhesion molecule isoform X26 [Rattus nor..

Score:2350 Evalue:0

Accession:XP_017449775.1

Alignment

neuronal cell adhesion molecule isoform X3 [Arvicanthis..

Score:2350 Evalue:0

Accession:XP_034369630.1

Alignment

neuronal cell adhesion molecule isoform X20 [Mus caroli..

Score:2349 Evalue:0

Accession:XP_021035348.1

Alignment

neuronal cell adhesion molecule isoform X15 [Acomys rus..

Score:2348 Evalue:0

Accession:XP_051001323.1

Alignment

neuronal cell adhesion molecule isoform X16 [Mus pahari..

Score:2348 Evalue:0

Accession:XP_029396948.1

Alignment

neuronal cell adhesion molecule long isoform Nc7 [Rattu..

Score:2348 Evalue:0

Accession:AAS89824.1

Alignment

neuronal cell adhesion molecule isoform X23 [Mastomys c..

Score:2348 Evalue:0

Accession:XP_031212917.1

Alignment

neuronal cell adhesion molecule isoform X17 [Mus pahari..

Score:2346 Evalue:0

Accession:XP_029396949.1

Alignment

neuronal cell adhesion molecule isoform X28 [Rattus nor..

Score:2345 Evalue:0

Accession:XP_017449776.1

Alignment

neuronal cell adhesion molecule isoform X33 [Rattus nor..

Score:2345 Evalue:0

Accession:XP_038968621.1

Alignment

neuronal cell adhesion molecule isoform X28 [Peromyscus..

Score:2345 Evalue:0

Accession:XP_015863327.1

Alignment

neuronal cell adhesion molecule isoform X7 [Arvicanthis..

Score:2344 Evalue:0

Accession:XP_034369635.1

Alignment

neuronal cell adhesion molecule isoform X3 [Grammomys s..

Score:2343 Evalue:0

Accession:XP_028613289.1

Alignment

neuronal cell adhesion molecule isoform X29 [Peromyscus..

Score:2343 Evalue:0

Accession:XP_028738565.1

Alignment

neuronal cell adhesion molecule isoform X21 [Mus caroli..

Score:2343 Evalue:0

Accession:XP_029340421.1

Alignment

neuronal cell adhesion molecule isoform X21 [Microtus o..

Score:2343 Evalue:0

Accession:XP_041514208.1

Alignment

neuronal cell adhesion molecule isoform X5 [Grammomys s..

Score:2342 Evalue:0

Accession:XP_028613291.1

Alignment

neuronal cell adhesion molecule isoform X27 [Rattus nor..

Score:2340 Evalue:0

Accession:XP_038968628.1

Alignment

neuronal cell adhesion molecule isoform X15 [Onychomys ..

Score:2340 Evalue:0

Accession:XP_036061324.1

Alignment

neuronal cell adhesion molecule isoform X27 [Peromyscus..

Score:2339 Evalue:0

Accession:XP_015863326.1

Alignment

neuronal cell adhesion molecule isoform X41 [Mus muscul..

Score:2339 Evalue:0

Accession:XP_017170591.1

Alignment

neuronal cell adhesion molecule isoform X20 [Microtus o..

Score:2338 Evalue:0

Accession:XP_041514207.1

Alignment

neuronal cell adhesion molecule isoform X27 [Peromyscus..

Score:2338 Evalue:0

Accession:XP_028738563.1

Alignment

neuronal cell adhesion molecule isoform X16 [Microtus o..

Score:2338 Evalue:0

Accession:XP_005343873.1

Alignment

neuronal cell adhesion molecule isoform 2 precursor [Mu..

Score:2338 Evalue:0

Accession:NP_001139503.1

Alignment

neuronal cell adhesion molecule isoform X43 [Mus muscul..

Score:2338 Evalue:0

Accession:XP_017170592.1

Alignment

neuronal cell adhesion molecule isoform X22 [Mus caroli..

Score:2338 Evalue:0

Accession:XP_029340422.1

Alignment

neuronal cell adhesion molecule isoform X26 [Peromyscus..

Score:2337 Evalue:0

Accession:XP_015863325.1

Alignment

neuronal cell adhesion molecule isoform X28 [Myodes gla..

Score:2337 Evalue:0

Accession:XP_048271492.1

Alignment

neuronal cell adhesion molecule isoform X28 [Peromyscus..

Score:2336 Evalue:0

Accession:XP_028738564.1

Alignment

neuronal cell adhesion molecule isoform X36 [Mus muscul..

Score:2336 Evalue:0

Accession:XP_017170589.1

Alignment

neuronal cell adhesion molecule isoform X14 [Onychomys ..

Score:2336 Evalue:0

Accession:XP_036061323.1

Alignment

neuronal cell adhesion molecule isoform X46 [Mus muscul..

Score:2335 Evalue:0

Accession:XP_006516031.1

Alignment

neuronal cell adhesion molecule isoform X20 [Mus pahari..

Score:2335 Evalue:0

Accession:XP_029396953.1

Alignment

neuronal cell adhesion molecule isoform X13 [Onychomys ..

Score:2335 Evalue:0

Accession:XP_036061322.1

Alignment
- Alignment view
- CDS feature
- Line length:
- Help
  Alignment view: Choose how to view alignments. The default "pairwise" view shows how each subject sequence aligns individually to the query sequence. The "query-anchored" view shows how all subject sequences align to the query sequence. For each view type, you can choose to show "identities" (matching residues) as letters or dots. more...
  
  CDS feature: Show annotated coding region and translation. more...
  
  Line length: Number of letters to show on one line in an alignment.
- 0 sequences selected
- Help
  To select sequences, go to the Descriptions tab
Reports
- 0 sequences selected
- Help
  To select sequences, go to the Descriptions tab

Filter Results

Sequences producing significant alignments

Distribution of the top 100 Blast Hits on 100 subject sequences

Reports