BLASTP 2.15.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro
A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and
David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new
generation of protein database search programs", Nucleic
Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Stephen
F. Altschul, John C. Wootton, E. Michael Gertz, Richa
Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and
Yi-Kuo Yu (2005) "Protein database searches using
compositionally adjusted substitution matrices", FEBS J.
272:5101-5109.
RID: VSFPWV69013
Database: NCBI Protein Reference Sequences
305,829,864 sequences; 118,241,393,165 total letters
Query= NP_001002646.1 adenosine deaminase [Danio rerio]
Length=362
No significant similarity found. For reasons why, click here.
Database: NCBI Protein Reference Sequences
Posted date: Nov 19, 2020 12:42 AM
Number of letters in database: 54,556,637,845
Number of sequences in database: 157,543,883
Lambda K H
0.318 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 157543883
Number of Hits to DB: 6217548
Number of extensions: 4746
Number of successful extensions: 1566
Number of sequences better than 0.5: 279
Number of HSP's better than 0.5 without gapping: 0
Number of HSP's gapped: 1251
Number of HSP's successfully gapped: 282
Length of query: 362
Length of database: 54556637845
Length adjustment: 156
Effective length of query: 206
Effective length of database: 29979792097
Effective search space: 6175837171982
Effective search space used: 6175837171982
T: 21
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 101 (43.5 bits)
ka-blk-alpha gapped: 1.9
ka-blk-alpha ungapped: 0.7916
ka-blk-alpha_v gapped: 42.6028
ka-blk-alpha_v ungapped: 4.96466
ka-blk-sigma gapped: 43.6362