Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_060695.2
WD40 repeat-containing protein SMU1 [Homo sapiens]
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Query length:
513 aa
DOMAINS: and other(s) domains
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suppressor of mec-8 and unc-52 protein homolog 1 1672 [Glycine max] >gb|KAH1050957.1| hypothetical protein GYH30_021078 [Glycine max] >gb|KRH43068.1| hypothetical protein GLYMA_08G128700v4 [Glycine max]
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suppressor of mec-8 and unc-52 protein homolog 1 [Glycine max] >gb|KAG5015536.1| hypothetical protein JHK85_021672 [Glycine max] >gb|KAH1050957.1| hypothetical protein GYH30_021078 [Glycine max] >gb|KRH43068.1| hypothetical protein GLYMA_08G128700v4 [Glycine max]
513 aa protein
accession:XP_003531308.1
transducin family protein / WD-40 repeat family protein c-52 protein homolog 1; Short=AtSMU-1; AltName: Full=RNA splicing protein SMU1; AltName: Full=WD40 repeat-containing protein SMU1 [Arabidopsis thaliana] >gb|KAG7651599.1| LIS1 homology motif [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7659461.1| WD40 repeat [Arabidopsis suecica] >gb|AAL58892.1| At1g73720/F25P22_14 [Arabidopsis thaliana] >gb|AAM26696.1| At1g73720/F25P22_14 [Arabidopsis thaliana] >gb|AEE35501.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
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transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] >sp|Q8W117.1| RecName: Full=Suppressor of mec-8 and unc-52 protein homolog 1; Short=AtSMU-1; AltName: Full=RNA splicing protein SMU1; AltName: Full=WD40 repeat-containing protein SMU1 [Arabidopsis thaliana] >gb|KAG7651599.1| LIS1 homology motif [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7659461.1| WD40 repeat [Arabidopsis suecica] >gb|AAL58892.1| At1g73720/F25P22_14 [Arabidopsis thaliana] >gb|AAM26696.1| At1g73720/F25P22_14 [Arabidopsis thaliana] >gb|AEE35501.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
511 aa protein
accession:NP_177513.2
Smu1 spliceosomal factor, isoform B omal factor, isoform C [Drosophila melanogaster] >ref|NP_650766.1| Smu1 spliceosomal factor, isoform A [Drosophila melanogaster] >ref|XP_002044906.1| WD40 repeat-containing protein SMU1 [Drosophila sechellia] >ref|XP_016034089.1| WD40 repeat-containing protein SMU1 [Drosophila simulans] >ref|XP_033163795.1| WD40 repeat-containing protein SMU1 [Drosophila mauritiana] >gb|AAF55614.2| Smu1 spliceosomal factor, isoform A [Drosophila melanogaster] >gb|AAK93353.1| LD41216p [Drosophila melanogaster] >gb|AFH06507.1| Smu1 spliceosomal factor, isoform B [Drosophila melanogaster] >gb|AFH06508.1| Smu1 spliceosomal factor, isoform C [Drosophila melanogaster] >gb|EDW45842.1| GM13648 [Drosophila sechellia]
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Smu1 spliceosomal factor, isoform B [Drosophila melanogaster] >ref|NP_001247190.1| Smu1 spliceosomal factor, isoform C [Drosophila melanogaster] >ref|NP_650766.1| Smu1 spliceosomal factor, isoform A [Drosophila melanogaster] >ref|XP_002044906.1| WD40 repeat-containing protein SMU1 [Drosophila sechellia] >ref|XP_016034089.1| WD40 repeat-containing protein SMU1 [Drosophila simulans] >ref|XP_033163795.1| WD40 repeat-containing protein SMU1 [Drosophila mauritiana] >gb|AAF55614.2| Smu1 spliceosomal factor, isoform A [Drosophila melanogaster] >gb|AAK93353.1| LD41216p [Drosophila melanogaster] >gb|AFH06507.1| Smu1 spliceosomal factor, isoform B [Drosophila melanogaster] >gb|AFH06508.1| Smu1 spliceosomal factor, isoform C [Drosophila melanogaster] >gb|EDW45842.1| GM13648 [Drosophila sechellia]
509 aa protein
accession:NP_001247189.1
WD40 repeat-containing protein SMU1 epeat-containing protein SMU1; AltName: Full=Smu-1 suppressor of mec-8 and unc-52 protein homolog [Danio rerio] >gb|AAH45945.1| Smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Danio rerio]
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WD40 repeat-containing protein SMU1 [Danio rerio] >sp|Q7ZVA0.1| RecName: Full=WD40 repeat-containing protein SMU1; AltName: Full=Smu-1 suppressor of mec-8 and unc-52 protein homolog [Danio rerio] >gb|AAH45945.1| Smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Danio rerio]
513 aa protein
accession:NP_956493.1
Query: WD40 repeat-containing protein SMU1
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WD40 repeat-containing protein SMU1 [Homo sapiens]
513 aa protein
accession:NP_060695.2
WD40 repeat-containing protein SMU1 isoform X1 rotein SMU1 isoform X1 [Homo sapiens]
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WD40 repeat-containing protein SMU1 isoform X1 [Homo sapiens] >ref|XP_054219192.1| WD40 repeat-containing protein SMU1 isoform X1 [Homo sapiens]
462 aa protein
accession:XP_005251560.1
DOMAINS: and other(s) domains
...
suppressor of mec-8 and unc-52 protein homolog 1 [Glycine max] >gb|KAG5015536.1| hypothetical protein JHK85_021672 [Glycine max] >gb|KAH1050957.1| hypothetical protein GYH30_021078 [Glycine max] >gb|KRH43068.1| hypothetical protein GLYMA_08G128700v4 [Glycine max]
513 aa protein
accession:XP_003531308.1
transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] >sp|Q8W117.1| RecName: Full=Suppressor of mec-8 and unc-52 protein homolog 1; Short=AtSMU-1; AltName: Full=RNA splicing protein SMU1; AltName: Full=WD40 repeat-containing protein SMU1 [Arabidopsis thaliana] >gb|KAG7651599.1| LIS1 homology motif [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7659461.1| WD40 repeat [Arabidopsis suecica] >gb|AAL58892.1| At1g73720/F25P22_14 [Arabidopsis thaliana] >gb|AAM26696.1| At1g73720/F25P22_14 [Arabidopsis thaliana] >gb|AEE35501.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
511 aa protein
accession:NP_177513.2
Smu1 spliceosomal factor, isoform B [Drosophila melanogaster] >ref|NP_001247190.1| Smu1 spliceosomal factor, isoform C [Drosophila melanogaster] >ref|NP_650766.1| Smu1 spliceosomal factor, isoform A [Drosophila melanogaster] >ref|XP_002044906.1| WD40 repeat-containing protein SMU1 [Drosophila sechellia] >ref|XP_016034089.1| WD40 repeat-containing protein SMU1 [Drosophila simulans] >ref|XP_033163795.1| WD40 repeat-containing protein SMU1 [Drosophila mauritiana] >gb|AAF55614.2| Smu1 spliceosomal factor, isoform A [Drosophila melanogaster] >gb|AAK93353.1| LD41216p [Drosophila melanogaster] >gb|AFH06507.1| Smu1 spliceosomal factor, isoform B [Drosophila melanogaster] >gb|AFH06508.1| Smu1 spliceosomal factor, isoform C [Drosophila melanogaster] >gb|EDW45842.1| GM13648 [Drosophila sechellia]
509 aa protein
accession:NP_001247189.1
WD40 repeat-containing protein SMU1 [Danio rerio] >sp|Q7ZVA0.1| RecName: Full=WD40 repeat-containing protein SMU1; AltName: Full=Smu-1 suppressor of mec-8 and unc-52 protein homolog [Danio rerio] >gb|AAH45945.1| Smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Danio rerio]
513 aa protein
accession:NP_956493.1
WD40 repeat-containing protein SMU1 [Homo sapiens]
513 aa protein
accession:NP_060695.2
WD40 repeat-containing protein SMU1 isoform X1 [Homo sapiens] >ref|XP_054219192.1| WD40 repeat-containing protein SMU1 isoform X1 [Homo sapiens]
462 aa protein
accession:XP_005251560.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1033 | 1033 | 100% | 0.0 | 95.52% | NP_956493.1 | |
2 | 943 | 943 | 100% | 0.0 | 90.06% | XP_005251560.1 | |
3 | 869 | 869 | 100% | 0.0 | 77.97% | NP_001247189.1 | |
4 | 734 | 734 | 99% | 0.0 | 66.21% | XP_003531308.1 | |
5 | 715 | 715 | 100% | 0.0 | 64.72% | NP_177513.2 |