Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q9NR33.2
RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=DNA polymerase epsilon subunit p12
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Query length:
117 aa
DOMAINS: and other(s) domains
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DNA polymerase epsilon subunit 4, isoform B ubunit 4, isoform A [Drosophila melanogaster] >sp|Q9W256.1| RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=Mesoderm-expressed 4 [Drosophila melanogaster] >gb|ACL84254.1| Mes4-PA, partial [synthetic construct] >gb|AAF46843.1| DNA polymerase epsilon subunit 4, isoform A [Drosophila melanogaster] >gb|AAY55161.1| IP14609p [Drosophila melanogaster] >gb|ACZ94525.1| DNA polymerase epsilon subunit 4, isoform B [Drosophila melanogaster] >gb|ANY27717.1| GEO12186p1 [Drosophila melanogaster]
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DNA polymerase epsilon subunit 4, isoform B [Drosophila melanogaster] >ref|NP_611669.1| DNA polymerase epsilon subunit 4, isoform A [Drosophila melanogaster] >sp|Q9W256.1| RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=Mesoderm-expressed 4 [Drosophila melanogaster] >gb|ACL84254.1| Mes4-PA, partial [synthetic construct] >gb|AAF46843.1| DNA polymerase epsilon subunit 4, isoform A [Drosophila melanogaster] >gb|AAY55161.1| IP14609p [Drosophila melanogaster] >gb|ACZ94525.1| DNA polymerase epsilon subunit 4, isoform B [Drosophila melanogaster] >gb|ANY27717.1| GEO12186p1 [Drosophila melanogaster]
155 aa protein
accession:NP_001163253.1
nuclear factor Y, subunit C6 =Nuclear transcription factor Y subunit C-6; Short=AtNF-YC-6 [Arabidopsis thaliana] >gb|KAG7605603.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7612529.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica] >gb|AAT41766.1| At5g50480 [Arabidopsis thaliana] >gb|AAT70457.1| At5g50480 [Arabidopsis thaliana] >gb|AED95950.1| nuclear factor Y, subunit C6 [Arabidopsis thaliana]
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nuclear factor Y, subunit C6 [Arabidopsis thaliana] >sp|Q9FGP7.1| RecName: Full=Nuclear transcription factor Y subunit C-6; Short=AtNF-YC-6 [Arabidopsis thaliana] >gb|KAG7605603.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7612529.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica] >gb|AAT41766.1| At5g50480 [Arabidopsis thaliana] >gb|AAT70457.1| At5g50480 [Arabidopsis thaliana] >gb|AED95950.1| nuclear factor Y, subunit C6 [Arabidopsis thaliana]
202 aa protein
accession:NP_199859.1
nuclear transcription factor Y subunit gamma isoform X22 unit gamma isoform X22 [Homo sapiens]
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nuclear transcription factor Y subunit gamma isoform X22 [Homo sapiens] >ref|XP_054192762.1| nuclear transcription factor Y subunit gamma isoform X22 [Homo sapiens]
355 aa protein
accession:XP_016856855.1
DNA polymerase epsilon subunit 4
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DNA polymerase epsilon subunit 4 [Danio rerio]
127 aa protein
accession:NP_001338727.1
Query: RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=DNA polymerase epsilon subunit p12
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RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=DNA polymerase epsilon subunit p12
117 aa protein
accession:Q9NR33.2
DNA polymerase epsilon subunit 4 isoform 1 e epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=DNA polymerase epsilon subunit p12 [Mus musculus] >gb|AAH23189.1| Polymerase (DNA-directed), epsilon 4 (p12 subunit) [Mus musculus] >gb|EDK99034.1| polymerase (DNA-directed), epsilon 4 (p12 subunit) [Mus musculus] >dbj|BAB26722.1| unnamed protein product [Mus musculus] >dbj|BAB26833.1| unnamed protein product [Mus musculus] >dbj|BAB27723.1| unnamed protein product [Mus musculus]
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DNA polymerase epsilon subunit 4 isoform 1 [Mus musculus] >sp|Q9CQ36.1| RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=DNA polymerase epsilon subunit p12 [Mus musculus] >gb|AAH23189.1| Polymerase (DNA-directed), epsilon 4 (p12 subunit) [Mus musculus] >gb|EDK99034.1| polymerase (DNA-directed), epsilon 4 (p12 subunit) [Mus musculus] >dbj|BAB26722.1| unnamed protein product [Mus musculus] >dbj|BAB26833.1| unnamed protein product [Mus musculus] >dbj|BAB27723.1| unnamed protein product [Mus musculus]
118 aa protein
accession:NP_080158.1
DOMAINS: and other(s) domains
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DNA polymerase epsilon subunit 4, isoform B [Drosophila melanogaster] >ref|NP_611669.1| DNA polymerase epsilon subunit 4, isoform A [Drosophila melanogaster] >sp|Q9W256.1| RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=Mesoderm-expressed 4 [Drosophila melanogaster] >gb|ACL84254.1| Mes4-PA, partial [synthetic construct] >gb|AAF46843.1| DNA polymerase epsilon subunit 4, isoform A [Drosophila melanogaster] >gb|AAY55161.1| IP14609p [Drosophila melanogaster] >gb|ACZ94525.1| DNA polymerase epsilon subunit 4, isoform B [Drosophila melanogaster] >gb|ANY27717.1| GEO12186p1 [Drosophila melanogaster]
155 aa protein
accession:NP_001163253.1
nuclear factor Y, subunit C6 [Arabidopsis thaliana] >sp|Q9FGP7.1| RecName: Full=Nuclear transcription factor Y subunit C-6; Short=AtNF-YC-6 [Arabidopsis thaliana] >gb|KAG7605603.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7612529.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica] >gb|AAT41766.1| At5g50480 [Arabidopsis thaliana] >gb|AAT70457.1| At5g50480 [Arabidopsis thaliana] >gb|AED95950.1| nuclear factor Y, subunit C6 [Arabidopsis thaliana]
202 aa protein
accession:NP_199859.1
nuclear transcription factor Y subunit gamma isoform X22 [Homo sapiens] >ref|XP_054192762.1| nuclear transcription factor Y subunit gamma isoform X22 [Homo sapiens]
355 aa protein
accession:XP_016856855.1
DNA polymerase epsilon subunit 4 [Danio rerio]
127 aa protein
accession:NP_001338727.1
RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=DNA polymerase epsilon subunit p12
117 aa protein
accession:Q9NR33.2
DNA polymerase epsilon subunit 4 isoform 1 [Mus musculus] >sp|Q9CQ36.1| RecName: Full=DNA polymerase epsilon subunit 4; AltName: Full=DNA polymerase II subunit 4; AltName: Full=DNA polymerase epsilon subunit p12 [Mus musculus] >gb|AAH23189.1| Polymerase (DNA-directed), epsilon 4 (p12 subunit) [Mus musculus] >gb|EDK99034.1| polymerase (DNA-directed), epsilon 4 (p12 subunit) [Mus musculus] >dbj|BAB26722.1| unnamed protein product [Mus musculus] >dbj|BAB26833.1| unnamed protein product [Mus musculus] >dbj|BAB27723.1| unnamed protein product [Mus musculus]
118 aa protein
accession:NP_080158.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 206 | 206 | 100% | 4e-69 | 94.92% | NP_080158.1 | |
2 | 139 | 139 | 88% | 2e-42 | 67.59% | NP_001338727.1 | |
3 | 95.5 | 95.5 | 70% | 6e-25 | 45.12% | NP_001163253.1 | |
4 | 69.3 | 69.3 | 62% | 2e-14 | 41.10% | NP_199859.1 | |
5 | 68.2 | 68.2 | 69% | 2e-13 | 39.51% | XP_016856855.1 |