Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q00653.4
RecName: Full=Nuclear factor NF-kappa-B p100 subunit; AltName: Full=DNA-binding factor KBF2; AltName: Full=H2TF1; AltName: Full=Lymphocyte translocation chromosome 10 protein; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2; AltName: Full=Oncogene Lyt-10; Short=Lyt10; Contains: RecName: Full=Nuclear factor NF-kappa-B p52 subunit
...
Query length:
900 aa
DOMAINS: and other(s) domains
...
dorsal, isoform D 1.1| dorsal, isoform E [Drosophila melanogaster] >ref|NP_724052.1| dorsal, isoform A [Drosophila melanogaster] >ref|NP_724053.1| dorsal, isoform B [Drosophila melanogaster] >gb|AOQ11154.1| dl-RA [synthetic construct] >gb|AAF53610.1| dorsal, isoform B [Drosophila melanogaster] >gb|AAF53611.1| dorsal, isoform A [Drosophila melanogaster] >gb|ACZ94286.1| dorsal, isoform D [Drosophila melanogaster] >gb|ACZ94287.1| dorsal, isoform E [Drosophila melanogaster]
...
dorsal, isoform D [Drosophila melanogaster] >ref|NP_001163001.1| dorsal, isoform E [Drosophila melanogaster] >ref|NP_724052.1| dorsal, isoform A [Drosophila melanogaster] >ref|NP_724053.1| dorsal, isoform B [Drosophila melanogaster] >gb|AOQ11154.1| dl-RA [synthetic construct] >gb|AAF53610.1| dorsal, isoform B [Drosophila melanogaster] >gb|AAF53611.1| dorsal, isoform A [Drosophila melanogaster] >gb|ACZ94286.1| dorsal, isoform D [Drosophila melanogaster] >gb|ACZ94287.1| dorsal, isoform E [Drosophila melanogaster]
677 aa protein
accession:NP_001163000.1
nuclear factor NF-kappa-B p100 subunit F-kappa-B p100 subunit isoform X1 [Danio rerio] >gb|AAI22886.1| Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 [Danio rerio]
...
nuclear factor NF-kappa-B p100 subunit [Danio rerio] >ref|XP_009305581.1| nuclear factor NF-kappa-B p100 subunit isoform X1 [Danio rerio] >gb|AAI22886.1| Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 [Danio rerio]
902 aa protein
accession:NP_001001840.2
nuclear factor NF-kappa-B p100 subunit isoform b p100 subunit isoform X1 [Mus musculus]
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nuclear factor NF-kappa-B p100 subunit isoform b [Mus musculus] >ref|XP_006526806.1| nuclear factor NF-kappa-B p100 subunit isoform X1 [Mus musculus]
900 aa protein
accession:NP_001170841.1
nuclear factor NF-kappa-B p100 subunit isoform b p100 subunit isoform b [Homo sapiens] >ref|NP_002493.3| nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >gb|AAX32469.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 [synthetic construct] >gb|AAH02844.1| Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Homo sapiens] >gb|AAP88771.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Homo sapiens] >gb|EAW49700.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100), isoform CRA_a [Homo sapiens] >gb|EAW49701.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100), isoform CRA_a [Homo sapiens]
...
nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >ref|NP_001275653.1| nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >ref|NP_002493.3| nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >gb|AAX32469.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 [synthetic construct] >gb|AAH02844.1| Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Homo sapiens] >gb|AAP88771.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Homo sapiens] >gb|EAW49700.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100), isoform CRA_a [Homo sapiens] >gb|EAW49701.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100), isoform CRA_a [Homo sapiens]
899 aa protein
accession:NP_001248332.1
Query: RecName: Full=Nuclear factor NF-kappa-B p100 subunit; AltName: Full=DNA-binding factor KBF2; AltName: Full=H2TF1; AltName: Full=Lymphocyte translocation chromosome 10 protein; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2; AltName: Full=Oncogene Lyt-10; Short=Lyt10; Contains: RecName: Full=Nuclear factor NF-kappa-B p52 subunit
...
RecName: Full=Nuclear factor NF-kappa-B p100 subunit; AltName: Full=DNA-binding factor KBF2; AltName: Full=H2TF1; AltName: Full=Lymphocyte translocation chromosome 10 protein; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2; AltName: Full=Oncogene Lyt-10; Short=Lyt10; Contains: RecName: Full=Nuclear factor NF-kappa-B p52 subunit
900 aa protein
accession:Q00653.4
nuclear factor NF-kappa-B p100 subunit isoform c
...
nuclear factor NF-kappa-B p100 subunit isoform c [Homo sapiens]
858 aa protein
accession:NP_001309864.1
DOMAINS: and other(s) domains
...
dorsal, isoform D [Drosophila melanogaster] >ref|NP_001163001.1| dorsal, isoform E [Drosophila melanogaster] >ref|NP_724052.1| dorsal, isoform A [Drosophila melanogaster] >ref|NP_724053.1| dorsal, isoform B [Drosophila melanogaster] >gb|AOQ11154.1| dl-RA [synthetic construct] >gb|AAF53610.1| dorsal, isoform B [Drosophila melanogaster] >gb|AAF53611.1| dorsal, isoform A [Drosophila melanogaster] >gb|ACZ94286.1| dorsal, isoform D [Drosophila melanogaster] >gb|ACZ94287.1| dorsal, isoform E [Drosophila melanogaster]
677 aa protein
accession:NP_001163000.1
nuclear factor NF-kappa-B p100 subunit [Danio rerio] >ref|XP_009305581.1| nuclear factor NF-kappa-B p100 subunit isoform X1 [Danio rerio] >gb|AAI22886.1| Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 [Danio rerio]
902 aa protein
accession:NP_001001840.2
nuclear factor NF-kappa-B p100 subunit isoform b [Mus musculus] >ref|XP_006526806.1| nuclear factor NF-kappa-B p100 subunit isoform X1 [Mus musculus]
900 aa protein
accession:NP_001170841.1
nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >ref|NP_001275653.1| nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >ref|NP_002493.3| nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >gb|AAX32469.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 [synthetic construct] >gb|AAH02844.1| Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Homo sapiens] >gb|AAP88771.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Homo sapiens] >gb|EAW49700.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100), isoform CRA_a [Homo sapiens] >gb|EAW49701.1| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100), isoform CRA_a [Homo sapiens]
899 aa protein
accession:NP_001248332.1
RecName: Full=Nuclear factor NF-kappa-B p100 subunit; AltName: Full=DNA-binding factor KBF2; AltName: Full=H2TF1; AltName: Full=Lymphocyte translocation chromosome 10 protein; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2; AltName: Full=Oncogene Lyt-10; Short=Lyt10; Contains: RecName: Full=Nuclear factor NF-kappa-B p52 subunit
900 aa protein
accession:Q00653.4
nuclear factor NF-kappa-B p100 subunit isoform c [Homo sapiens]
858 aa protein
accession:NP_001309864.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 1826 | 1826 | 100% | 0.0 | 99.89% | NP_001248332.1 | |
2 | 1595 | 1595 | 100% | 0.0 | 91.89% | NP_001170841.1 | |
3 | 738 | 738 | 95% | 0.0 | 48.82% | NP_001001840.2 | |
4 | 234 | 234 | 33% | 8e-65 | 41.16% | NP_001163000.1 | |
5 | 1728 | 1728 | 100% | 0.0 | 95.33% | NP_001309864.1 |