Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P43246.1
RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2; AltName: Full=MutS protein homolog 2
...
Query length:
934 aa
DOMAINS: and other(s) domains
...
spellchecker1, isoform E ellchecker1, isoform D [Drosophila melanogaster] >ref|NP_001285931.1| spellchecker1, isoform F [Drosophila melanogaster] >ref|NP_523565.2| spellchecker1, isoform A [Drosophila melanogaster] >sp|P43248.4| RecName: Full=DNA mismatch repair protein spellchecker 1 [Drosophila melanogaster] >gb|AAF53392.2| spellchecker1, isoform A [Drosophila melanogaster] >gb|AAO41195.3| spellchecker1, isoform E [Drosophila melanogaster] >gb|AFH03705.1| spellchecker1, isoform D [Drosophila melanogaster] >gb|AHN54445.1| spellchecker1, isoform F [Drosophila melanogaster]
...
spellchecker1, isoform E [Drosophila melanogaster] >ref|NP_001246031.1| spellchecker1, isoform D [Drosophila melanogaster] >ref|NP_001285931.1| spellchecker1, isoform F [Drosophila melanogaster] >ref|NP_523565.2| spellchecker1, isoform A [Drosophila melanogaster] >sp|P43248.4| RecName: Full=DNA mismatch repair protein spellchecker 1 [Drosophila melanogaster] >gb|AAF53392.2| spellchecker1, isoform A [Drosophila melanogaster] >gb|AAO41195.3| spellchecker1, isoform E [Drosophila melanogaster] >gb|AFH03705.1| spellchecker1, isoform D [Drosophila melanogaster] >gb|AHN54445.1| spellchecker1, isoform F [Drosophila melanogaster]
917 aa protein
accession:NP_001014482.2
hypothetical protein DDB_G0275809 mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Dictyostelium discoideum] >gb|EAL69655.1| hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]
...
hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4] >sp|Q553L4.1| RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Dictyostelium discoideum] >gb|EAL69655.1| hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]
937 aa protein
accession:XP_643399.1
DNA mismatch repair protein Msh2 (E. coli) [Danio rerio]
...
DNA mismatch repair protein Msh2 [Danio rerio] >gb|AAH44370.1| MutS homolog 2 (E. coli) [Danio rerio]
936 aa protein
accession:NP_998689.1
DNA mismatch repair protein Msh2 mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Mus musculus] >gb|AAH47117.1| MutS homolog 2 (E. coli) [Mus musculus] >gb|EDL38635.1| mutS homolog 2 (E. coli) [Mus musculus] >emb|CAA57049.1| MSH2 [Mus musculus] >dbj|BAE34223.1| unnamed protein product [Mus musculus]
...
DNA mismatch repair protein Msh2 [Mus musculus] >sp|P43247.1| RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Mus musculus] >gb|AAH47117.1| MutS homolog 2 (E. coli) [Mus musculus] >gb|EDL38635.1| mutS homolog 2 (E. coli) [Mus musculus] >emb|CAA57049.1| MSH2 [Mus musculus] >dbj|BAE34223.1| unnamed protein product [Mus musculus]
935 aa protein
accession:NP_032654.1
Query: RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2; AltName: Full=MutS protein homolog 2
...
RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2; AltName: Full=MutS protein homolog 2
934 aa protein
accession:P43246.1
DNA mismatch repair protein Msh2 isoform 10
...
DNA mismatch repair protein Msh2 isoform 10 [Homo sapiens]
947 aa protein
accession:NP_001393567.1
DOMAINS: and other(s) domains
...
spellchecker1, isoform E [Drosophila melanogaster] >ref|NP_001246031.1| spellchecker1, isoform D [Drosophila melanogaster] >ref|NP_001285931.1| spellchecker1, isoform F [Drosophila melanogaster] >ref|NP_523565.2| spellchecker1, isoform A [Drosophila melanogaster] >sp|P43248.4| RecName: Full=DNA mismatch repair protein spellchecker 1 [Drosophila melanogaster] >gb|AAF53392.2| spellchecker1, isoform A [Drosophila melanogaster] >gb|AAO41195.3| spellchecker1, isoform E [Drosophila melanogaster] >gb|AFH03705.1| spellchecker1, isoform D [Drosophila melanogaster] >gb|AHN54445.1| spellchecker1, isoform F [Drosophila melanogaster]
917 aa protein
accession:NP_001014482.2
hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4] >sp|Q553L4.1| RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Dictyostelium discoideum] >gb|EAL69655.1| hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]
937 aa protein
accession:XP_643399.1
DNA mismatch repair protein Msh2 [Danio rerio] >gb|AAH44370.1| MutS homolog 2 (E. coli) [Danio rerio]
936 aa protein
accession:NP_998689.1
DNA mismatch repair protein Msh2 [Mus musculus] >sp|P43247.1| RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Mus musculus] >gb|AAH47117.1| MutS homolog 2 (E. coli) [Mus musculus] >gb|EDL38635.1| mutS homolog 2 (E. coli) [Mus musculus] >emb|CAA57049.1| MSH2 [Mus musculus] >dbj|BAE34223.1| unnamed protein product [Mus musculus]
935 aa protein
accession:NP_032654.1
RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2; AltName: Full=MutS protein homolog 2
934 aa protein
accession:P43246.1
DNA mismatch repair protein Msh2 isoform 10 [Homo sapiens]
947 aa protein
accession:NP_001393567.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 1922 | 1922 | 100% | 0.0 | 98.63% | NP_001393567.1 | |
2 | 1778 | 1778 | 99% | 0.0 | 92.80% | NP_032654.1 | |
3 | 1437 | 1437 | 99% | 0.0 | 72.09% | NP_998689.1 | |
4 | 750 | 750 | 90% | 0.0 | 44.73% | NP_001014482.2 | |
5 | 718 | 718 | 89% | 0.0 | 42.86% | XP_643399.1 |