Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_073729.1
microtubule-associated proteins 1A/1B light chain 3B [Homo sapiens]
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Query length:
125 aa
DOMAINS: and other(s) domains
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Ubiquitin-like superfamily protein hagy-related protein 8i; AltName: Full=Autophagy-related ubiquitin-like modifier ATG8i; Short=AtAPG8i; Short=Protein autophagy 8i [Arabidopsis thaliana] >gb|KAG7625363.1| Autophagy protein Atg8 ubiquitin-like [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7631373.1| Autophagy protein Atg8 ubiquitin-like [Arabidopsis suecica] >gb|AAM63360.1| putative microtubule-associated protein [Arabidopsis thaliana] >gb|AAM70189.1| autophagy APG8 [Arabidopsis thaliana] >gb|ABD38893.1| At3g15580 [Arabidopsis thaliana]
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Ubiquitin-like superfamily protein [Arabidopsis thaliana] >sp|Q9LRP7.1| RecName: Full=Autophagy-related protein 8i; AltName: Full=Autophagy-related ubiquitin-like modifier ATG8i; Short=AtAPG8i; Short=Protein autophagy 8i [Arabidopsis thaliana] >gb|KAG7625363.1| Autophagy protein Atg8 ubiquitin-like [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7631373.1| Autophagy protein Atg8 ubiquitin-like [Arabidopsis suecica] >gb|AAM63360.1| putative microtubule-associated protein [Arabidopsis thaliana] >gb|AAM70189.1| autophagy APG8 [Arabidopsis thaliana] >gb|ABD38893.1| At3g15580 [Arabidopsis thaliana]
115 aa protein
accession:NP_566518.1
Protein lgg-2 1.2| Protein lgg-2 [Caenorhabditis elegans]
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Protein lgg-2 [Caenorhabditis elegans] >emb|CAA93421.2| Protein lgg-2 [Caenorhabditis elegans]
142 aa protein
accession:NP_001255523.2
microtubule-associated proteins 1A/1B light chain 3B ght chain 3 beta [Danio rerio] >gb|AAI55207.1| Map1lc3b protein [Danio rerio] >dbj|BAF43579.1| microtubule-associated protein 1-light chain 3B [Danio rerio]
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microtubule-associated proteins 1A/1B light chain 3B [Danio rerio] >gb|AAH49313.1| Microtubule-associated protein 1 light chain 3 beta [Danio rerio] >gb|AAI55207.1| Map1lc3b protein [Danio rerio] >dbj|BAF43579.1| microtubule-associated protein 1-light chain 3B [Danio rerio]
122 aa protein
accession:NP_955898.1
microtubule-associated proteins 1A/1B light chain 3B isoform 1 ght chain 3B [Mus caroli] >sp|Q9CQV6.3| RecName: Full=Microtubule-associated proteins 1A/1B light chain 3B; AltName: Full=Autophagy-related protein LC3 B; AltName: Full=Autophagy-related ubiquitin-like modifier LC3 B; AltName: Full=MAP1 light chain 3-like protein 2; AltName: Full=MAP1A/MAP1B light chain 3 B; Short=MAP1A/MAP1B LC3 B; AltName: Full=Microtubule-associated protein 1 light chain 3 beta; Flags: Precursor [Mus musculus] >pdb|5WRD|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5WRD|B Chain B, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIQ|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIS|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIS|B Chain B, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >gb|AAH68180.1| Microtubule-associated protein 1 light chain 3 beta [Mus musculus] >gb|AAL83723.1| MAP1A/1B light chain 3 subunit [Mus musculus] >gb|EDL11662.1| mCG14171, isoform CRA_a [Mus musculus] >dbj|BAB22364.1| unnamed protein product [Mus musculus] >dbj|BAB22569.1| unnamed protein product [Mus musculus]
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microtubule-associated proteins 1A/1B light chain 3B isoform 1 [Mus musculus] >ref|XP_021025476.1| microtubule-associated proteins 1A/1B light chain 3B [Mus caroli] >sp|Q9CQV6.3| RecName: Full=Microtubule-associated proteins 1A/1B light chain 3B; AltName: Full=Autophagy-related protein LC3 B; AltName: Full=Autophagy-related ubiquitin-like modifier LC3 B; AltName: Full=MAP1 light chain 3-like protein 2; AltName: Full=MAP1A/MAP1B light chain 3 B; Short=MAP1A/MAP1B LC3 B; AltName: Full=Microtubule-associated protein 1 light chain 3 beta; Flags: Precursor [Mus musculus] >pdb|5WRD|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5WRD|B Chain B, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIQ|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIS|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIS|B Chain B, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >gb|AAH68180.1| Microtubule-associated protein 1 light chain 3 beta [Mus musculus] >gb|AAL83723.1| MAP1A/1B light chain 3 subunit [Mus musculus] >gb|EDL11662.1| mCG14171, isoform CRA_a [Mus musculus] >dbj|BAB22364.1| unnamed protein product [Mus musculus] >dbj|BAB22569.1| unnamed protein product [Mus musculus]
125 aa protein
accession:NP_080436.1
Query: microtubule-associated proteins 1A/1B light chain 3B
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microtubule-associated proteins 1A/1B light chain 3B [Homo sapiens]
125 aa protein
accession:NP_073729.1
microtubule-associated proteins 1A/1B light chain 3B-like 1B light chain 3B-like [Homo sapiens]
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microtubule-associated proteins 1A/1B light chain 3B-like [Homo sapiens] >ref|XP_047301434.1| microtubule-associated proteins 1A/1B light chain 3B-like [Homo sapiens]
150 aa protein
accession:XP_047280234.1
DOMAINS: and other(s) domains
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Ubiquitin-like superfamily protein [Arabidopsis thaliana] >sp|Q9LRP7.1| RecName: Full=Autophagy-related protein 8i; AltName: Full=Autophagy-related ubiquitin-like modifier ATG8i; Short=AtAPG8i; Short=Protein autophagy 8i [Arabidopsis thaliana] >gb|KAG7625363.1| Autophagy protein Atg8 ubiquitin-like [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7631373.1| Autophagy protein Atg8 ubiquitin-like [Arabidopsis suecica] >gb|AAM63360.1| putative microtubule-associated protein [Arabidopsis thaliana] >gb|AAM70189.1| autophagy APG8 [Arabidopsis thaliana] >gb|ABD38893.1| At3g15580 [Arabidopsis thaliana]
115 aa protein
accession:NP_566518.1
Protein lgg-2 [Caenorhabditis elegans] >emb|CAA93421.2| Protein lgg-2 [Caenorhabditis elegans]
142 aa protein
accession:NP_001255523.2
microtubule-associated proteins 1A/1B light chain 3B [Danio rerio] >gb|AAH49313.1| Microtubule-associated protein 1 light chain 3 beta [Danio rerio] >gb|AAI55207.1| Map1lc3b protein [Danio rerio] >dbj|BAF43579.1| microtubule-associated protein 1-light chain 3B [Danio rerio]
122 aa protein
accession:NP_955898.1
microtubule-associated proteins 1A/1B light chain 3B isoform 1 [Mus musculus] >ref|XP_021025476.1| microtubule-associated proteins 1A/1B light chain 3B [Mus caroli] >sp|Q9CQV6.3| RecName: Full=Microtubule-associated proteins 1A/1B light chain 3B; AltName: Full=Autophagy-related protein LC3 B; AltName: Full=Autophagy-related ubiquitin-like modifier LC3 B; AltName: Full=MAP1 light chain 3-like protein 2; AltName: Full=MAP1A/MAP1B light chain 3 B; Short=MAP1A/MAP1B LC3 B; AltName: Full=Microtubule-associated protein 1 light chain 3 beta; Flags: Precursor [Mus musculus] >pdb|5WRD|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5WRD|B Chain B, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIQ|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIS|A Chain A, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >pdb|5YIS|B Chain B, Microtubule-associated proteins 1A/1B light chain 3B [Mus musculus] >gb|AAH68180.1| Microtubule-associated protein 1 light chain 3 beta [Mus musculus] >gb|AAL83723.1| MAP1A/1B light chain 3 subunit [Mus musculus] >gb|EDL11662.1| mCG14171, isoform CRA_a [Mus musculus] >dbj|BAB22364.1| unnamed protein product [Mus musculus] >dbj|BAB22569.1| unnamed protein product [Mus musculus]
125 aa protein
accession:NP_080436.1
microtubule-associated proteins 1A/1B light chain 3B [Homo sapiens]
125 aa protein
accession:NP_073729.1
microtubule-associated proteins 1A/1B light chain 3B-like [Homo sapiens] >ref|XP_047301434.1| microtubule-associated proteins 1A/1B light chain 3B-like [Homo sapiens]
150 aa protein
accession:XP_047280234.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 248 | 248 | 100% | 1e-85 | 95.20% | NP_080436.1 | |
2 | 238 | 238 | 97% | 1e-81 | 93.44% | NP_955898.1 | |
3 | 224 | 224 | 99% | 8e-76 | 88.10% | XP_047280234.1 | |
4 | 135 | 135 | 92% | 9e-41 | 58.26% | NP_001255523.2 | |
5 | 100 | 100 | 92% | 2e-27 | 41.38% | NP_566518.1 |