Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P19793.1
RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha
...
Query length:
462 aa
DOMAINS: and other(s) domains
...
ultraspiracle, isoform B spiracle, isoform A [Drosophila melanogaster] >sp|P20153.1| RecName: Full=Protein ultraspiracle; AltName: Full=Chorion factor 1; AltName: Full=Nuclear receptor subfamily 2 group B member 4; AltName: Full=XR2C [Drosophila melanogaster] >pir|S11513| usp protein - fruit fly (Drosophila sp.) [Drosophila sp. (in: flies)] >gb|ACL84285.1| usp-PA, partial [synthetic construct] >gb|AAF45707.1| ultraspiracle, isoform A [Drosophila melanogaster] >gb|AAL39538.1| LD09973p [Drosophila melanogaster] >gb|ACL88925.1| usp-PA [synthetic construct] >gb|AGB95014.1| ultraspiracle, isoform B [Drosophila melanogaster]
...
ultraspiracle, isoform B [Drosophila melanogaster] >ref|NP_476781.1| ultraspiracle, isoform A [Drosophila melanogaster] >sp|P20153.1| RecName: Full=Protein ultraspiracle; AltName: Full=Chorion factor 1; AltName: Full=Nuclear receptor subfamily 2 group B member 4; AltName: Full=XR2C [Drosophila melanogaster] >pir|S11513| usp protein - fruit fly (Drosophila sp.) [Drosophila sp. (in: flies)] >gb|ACL84285.1| usp-PA, partial [synthetic construct] >gb|AAF45707.1| ultraspiracle, isoform A [Drosophila melanogaster] >gb|AAL39538.1| LD09973p [Drosophila melanogaster] >gb|ACL88925.1| usp-PA [synthetic construct] >gb|AGB95014.1| ultraspiracle, isoform B [Drosophila melanogaster]
508 aa protein
accession:NP_001259168.1
retinoic acid receptor RXR-alpha-A
...
retinoic acid receptor RXR-alpha-A [Danio rerio]
458 aa protein
accession:NP_001155023.1
retinoic acid receptor RXR-alpha isoform b or RXR-alpha isoform X3 [Rhinopithecus roxellana] >ref|XP_011846916.1| PREDICTED: retinoic acid receptor RXR-alpha isoform X1 [Mandrillus leucophaeus] >ref|XP_017704356.1| PREDICTED: retinoic acid receptor RXR-alpha isoform X2 [Rhinopithecus bieti] >ref|XP_024645548.1| retinoic acid receptor RXR-alpha isoform X1 [Macaca nemestrina] >ref|XP_025215628.1| retinoic acid receptor RXR-alpha isoform X1 [Theropithecus gelada] >ref|XP_030674003.1| retinoic acid receptor RXR-alpha isoform X3 [Nomascus leucogenys] >ref|XP_031510555.1| retinoic acid receptor RXR-alpha isoform X2 [Papio anubis] >ref|XP_032021485.1| retinoic acid receptor RXR-alpha isoform X3 [Hylobates moloch] >ref|XP_033094514.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_033094515.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_033094516.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_050616072.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_050616073.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_050616074.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_054514466.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_054514467.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_054514468.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_055126417.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_055126418.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063492851.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063492852.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063643507.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_063643508.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >gb|KAI2554526.1| retinoid X receptor alpha [Homo sapiens] >gb|KAI4009056.1| retinoid X receptor alpha [Homo sapiens]
...
retinoic acid receptor RXR-alpha isoform b [Homo sapiens] >ref|XP_010371073.1| retinoic acid receptor RXR-alpha isoform X3 [Rhinopithecus roxellana] >ref|XP_011846916.1| PREDICTED: retinoic acid receptor RXR-alpha isoform X1 [Mandrillus leucophaeus] >ref|XP_017704356.1| PREDICTED: retinoic acid receptor RXR-alpha isoform X2 [Rhinopithecus bieti] >ref|XP_024645548.1| retinoic acid receptor RXR-alpha isoform X1 [Macaca nemestrina] >ref|XP_025215628.1| retinoic acid receptor RXR-alpha isoform X1 [Theropithecus gelada] >ref|XP_030674003.1| retinoic acid receptor RXR-alpha isoform X3 [Nomascus leucogenys] >ref|XP_031510555.1| retinoic acid receptor RXR-alpha isoform X2 [Papio anubis] >ref|XP_032021485.1| retinoic acid receptor RXR-alpha isoform X3 [Hylobates moloch] >ref|XP_033094514.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_033094515.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_033094516.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_050616072.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_050616073.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_050616074.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_054514466.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_054514467.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_054514468.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_055126417.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_055126418.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063492851.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063492852.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063643507.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_063643508.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >gb|KAI2554526.1| retinoid X receptor alpha [Homo sapiens] >gb|KAI4009056.1| retinoid X receptor alpha [Homo sapiens]
435 aa protein
accession:NP_001278849.1
Query: RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha
...
RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha
462 aa protein
accession:P19793.1
retinoic acid receptor RXR-alpha isoform 1 receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha [Mus musculus] >gb|AAA40080.1| retinoid X receptor alpha [Mus musculus] >gb|AAI38801.1| Retinoid X receptor alpha [Mus musculus] >gb|AAI38803.1| Retinoid X receptor alpha [Mus musculus] >emb|CAA46962.1| retinoid X receptor-alpha [Mus musculus]
...
retinoic acid receptor RXR-alpha isoform 1 [Mus musculus] >sp|P28700.1| RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha [Mus musculus] >gb|AAA40080.1| retinoid X receptor alpha [Mus musculus] >gb|AAI38801.1| Retinoid X receptor alpha [Mus musculus] >gb|AAI38803.1| Retinoid X receptor alpha [Mus musculus] >emb|CAA46962.1| retinoid X receptor-alpha [Mus musculus]
467 aa protein
accession:NP_035435.1
retinoic acid receptor RXR-alpha isoform 2 or RXR-alpha isoform 2 [Mus musculus] >ref|XP_006497868.1| retinoic acid receptor RXR-alpha isoform X1 [Mus musculus] >ref|XP_030104727.1| retinoic acid receptor RXR-alpha isoform X1 [Mus musculus] >gb|AAB36777.1| RXR alpha 2 [Mus musculus] >gb|AAB36778.1| RXR alpha 3 [Mus musculus]
...
retinoic acid receptor RXR-alpha isoform 2 [Mus musculus] >ref|NP_001277411.1| retinoic acid receptor RXR-alpha isoform 2 [Mus musculus] >ref|XP_006497868.1| retinoic acid receptor RXR-alpha isoform X1 [Mus musculus] >ref|XP_030104727.1| retinoic acid receptor RXR-alpha isoform X1 [Mus musculus] >gb|AAB36777.1| RXR alpha 2 [Mus musculus] >gb|AAB36778.1| RXR alpha 3 [Mus musculus]
439 aa protein
accession:NP_001277410.1
DOMAINS: and other(s) domains
...
ultraspiracle, isoform B [Drosophila melanogaster] >ref|NP_476781.1| ultraspiracle, isoform A [Drosophila melanogaster] >sp|P20153.1| RecName: Full=Protein ultraspiracle; AltName: Full=Chorion factor 1; AltName: Full=Nuclear receptor subfamily 2 group B member 4; AltName: Full=XR2C [Drosophila melanogaster] >pir|S11513| usp protein - fruit fly (Drosophila sp.) [Drosophila sp. (in: flies)] >gb|ACL84285.1| usp-PA, partial [synthetic construct] >gb|AAF45707.1| ultraspiracle, isoform A [Drosophila melanogaster] >gb|AAL39538.1| LD09973p [Drosophila melanogaster] >gb|ACL88925.1| usp-PA [synthetic construct] >gb|AGB95014.1| ultraspiracle, isoform B [Drosophila melanogaster]
508 aa protein
accession:NP_001259168.1
retinoic acid receptor RXR-alpha-A [Danio rerio]
458 aa protein
accession:NP_001155023.1
retinoic acid receptor RXR-alpha isoform b [Homo sapiens] >ref|XP_010371073.1| retinoic acid receptor RXR-alpha isoform X3 [Rhinopithecus roxellana] >ref|XP_011846916.1| PREDICTED: retinoic acid receptor RXR-alpha isoform X1 [Mandrillus leucophaeus] >ref|XP_017704356.1| PREDICTED: retinoic acid receptor RXR-alpha isoform X2 [Rhinopithecus bieti] >ref|XP_024645548.1| retinoic acid receptor RXR-alpha isoform X1 [Macaca nemestrina] >ref|XP_025215628.1| retinoic acid receptor RXR-alpha isoform X1 [Theropithecus gelada] >ref|XP_030674003.1| retinoic acid receptor RXR-alpha isoform X3 [Nomascus leucogenys] >ref|XP_031510555.1| retinoic acid receptor RXR-alpha isoform X2 [Papio anubis] >ref|XP_032021485.1| retinoic acid receptor RXR-alpha isoform X3 [Hylobates moloch] >ref|XP_033094514.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_033094515.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_033094516.1| retinoic acid receptor RXR-alpha isoform X4 [Trachypithecus francoisi] >ref|XP_050616072.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_050616073.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_050616074.1| retinoic acid receptor RXR-alpha isoform X3 [Macaca thibetana thibetana] >ref|XP_054514466.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_054514467.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_054514468.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_055126417.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_055126418.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063492851.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063492852.1| retinoic acid receptor RXR-alpha isoform X2 [Symphalangus syndactylus] >ref|XP_063643507.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >ref|XP_063643508.1| retinoic acid receptor RXR-alpha isoform X3 [Pan troglodytes] >gb|KAI2554526.1| retinoid X receptor alpha [Homo sapiens] >gb|KAI4009056.1| retinoid X receptor alpha [Homo sapiens]
435 aa protein
accession:NP_001278849.1
RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha
462 aa protein
accession:P19793.1
retinoic acid receptor RXR-alpha isoform 1 [Mus musculus] >sp|P28700.1| RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha [Mus musculus] >gb|AAA40080.1| retinoid X receptor alpha [Mus musculus] >gb|AAI38801.1| Retinoid X receptor alpha [Mus musculus] >gb|AAI38803.1| Retinoid X receptor alpha [Mus musculus] >emb|CAA46962.1| retinoid X receptor-alpha [Mus musculus]
467 aa protein
accession:NP_035435.1
retinoic acid receptor RXR-alpha isoform 2 [Mus musculus] >ref|NP_001277411.1| retinoic acid receptor RXR-alpha isoform 2 [Mus musculus] >ref|XP_006497868.1| retinoic acid receptor RXR-alpha isoform X1 [Mus musculus] >ref|XP_030104727.1| retinoic acid receptor RXR-alpha isoform X1 [Mus musculus] >gb|AAB36777.1| RXR alpha 2 [Mus musculus] >gb|AAB36778.1| RXR alpha 3 [Mus musculus]
439 aa protein
accession:NP_001277410.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 937 | 937 | 100% | 0.0 | 97.43% | NP_035435.1 | |
| 2 | 905 | 905 | 94% | 0.0 | 100.00% | NP_001278849.1 | |
| 3 | 796 | 796 | 98% | 0.0 | 86.27% | NP_001155023.1 | |
| 4 | 363 | 363 | 73% | 4e-120 | 47.07% | NP_001259168.1 | |
| 5 | 890 | 890 | 94% | 0.0 | 97.72% | NP_001277410.1 |