Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
1FJE_B
Chain B, NUCLEOLIN RBD12 [Mesocricetus auratus] >pdb|1RKJ|A Chain A, Nucleolin [Mesocricetus auratus]
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Query length:
175 aa
DOMAINS: and other(s) domains
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polyadenylate-binding protein 7 protein GYH30_007678 [Glycine max] >gb|KRH67800.1| hypothetical protein GLYMA_03G188500v4 [Glycine max]
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polyadenylate-binding protein 7 [Glycine max] >gb|KAH1070733.1| hypothetical protein GYH30_007678 [Glycine max] >gb|KRH67800.1| hypothetical protein GLYMA_03G188500v4 [Glycine max]
632 aa protein
accession:XP_003521427.1
nucleolin isoform X2
...
nucleolin isoform X2 [Danio rerio]
657 aa protein
accession:XP_005170605.1
nucleolin like 1 ecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1; Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1; Short=AtPARL1 [Arabidopsis thaliana] >gb|AAG29744.1| nuM1 protein, putative [Arabidopsis thaliana] >gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana] >gb|AEE32367.1| nucleolin like 1 [Arabidopsis thaliana]
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nucleolin like 1 [Arabidopsis thaliana] >sp|Q9FVQ1.1| RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1; Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1; Short=AtPARL1 [Arabidopsis thaliana] >gb|AAG29744.1| nuM1 protein, putative [Arabidopsis thaliana] >gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana] >gb|AEE32367.1| nucleolin like 1 [Arabidopsis thaliana]
557 aa protein
accession:NP_175322.1
nucleolin 38.3| RecName: Full=Nucleolin; AltName: Full=Protein C23 [Homo sapiens] >dbj|BAG10924.1| nucleolin, partial [synthetic construct] >gb|AAY24247.1| unknown [Homo sapiens] >gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens] >gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens] >gb|KAI2527390.1| nucleolin [Homo sapiens]
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nucleolin [Homo sapiens] >sp|P19338.3| RecName: Full=Nucleolin; AltName: Full=Protein C23 [Homo sapiens] >dbj|BAG10924.1| nucleolin, partial [synthetic construct] >gb|AAY24247.1| unknown [Homo sapiens] >gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens] >gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens] >gb|KAI2527390.1| nucleolin [Homo sapiens]
710 aa protein
accession:NP_005372.2
Query: Chain B, NUCLEOLIN RBD12 cleolin [Mesocricetus auratus]
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Chain B, NUCLEOLIN RBD12 [Mesocricetus auratus] >pdb|1RKJ|A Chain A, Nucleolin [Mesocricetus auratus]
175 aa protein
accession:1FJE_B
nucleolin isoform X1
...
nucleolin isoform X1 [Mus musculus]
691 aa protein
accession:XP_006529301.1
DOMAINS: and other(s) domains
...
polyadenylate-binding protein 7 [Glycine max] >gb|KAH1070733.1| hypothetical protein GYH30_007678 [Glycine max] >gb|KRH67800.1| hypothetical protein GLYMA_03G188500v4 [Glycine max]
632 aa protein
accession:XP_003521427.1
nucleolin isoform X2 [Danio rerio]
657 aa protein
accession:XP_005170605.1
nucleolin like 1 [Arabidopsis thaliana] >sp|Q9FVQ1.1| RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1; Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1; Short=AtPARL1 [Arabidopsis thaliana] >gb|AAG29744.1| nuM1 protein, putative [Arabidopsis thaliana] >gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana] >gb|AEE32367.1| nucleolin like 1 [Arabidopsis thaliana]
557 aa protein
accession:NP_175322.1
nucleolin [Homo sapiens] >sp|P19338.3| RecName: Full=Nucleolin; AltName: Full=Protein C23 [Homo sapiens] >dbj|BAG10924.1| nucleolin, partial [synthetic construct] >gb|AAY24247.1| unknown [Homo sapiens] >gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens] >gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens] >gb|KAI2527390.1| nucleolin [Homo sapiens]
710 aa protein
accession:NP_005372.2
Chain B, NUCLEOLIN RBD12 [Mesocricetus auratus] >pdb|1RKJ|A Chain A, Nucleolin [Mesocricetus auratus]
175 aa protein
accession:1FJE_B
nucleolin isoform X1 [Mus musculus]
691 aa protein
accession:XP_006529301.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 334 | 396 | 98% | 3e-111 | 96.53% | XP_006529301.1 | |
| 2 | 288 | 358 | 98% | 5e-93 | 82.08% | NP_005372.2 | |
| 3 | 169 | 248 | 92% | 1e-48 | 53.01% | XP_005170605.1 | |
| 4 | 64.7 | 64.7 | 89% | 3e-11 | 29.45% | XP_003521427.1 | |
| 5 | 62.0 | 62.0 | 73% | 2e-10 | 34.38% | NP_175322.1 |