Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_414719.1
outer membrane protein assembly factor BamA [Escherichia coli str. K-12 substr. MG1655]
...
Query length:
810 aa
DOMAINS: and other(s) domains
...
sorting and assembly machinery component 50 homolog achinery component 50 homolog [Mus musculus] >gb|AAI19179.1| Sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >gb|AAI19181.1| Sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >gb|EDL04457.1| sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >dbj|BAC30484.1| unnamed protein product [Mus musculus] >dbj|BAC31062.1| unnamed protein product [Mus musculus]
...
sorting and assembly machinery component 50 homolog [Mus musculus] >sp|Q8BGH2.1| RecName: Full=Sorting and assembly machinery component 50 homolog [Mus musculus] >gb|AAI19179.1| Sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >gb|AAI19181.1| Sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >gb|EDL04457.1| sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >dbj|BAC30484.1| unnamed protein product [Mus musculus] >dbj|BAC31062.1| unnamed protein product [Mus musculus]
469 aa protein
accession:NP_848729.1
sorting and assembly machinery component 50 homolog achinery component 50 homolog; AltName: Full=Transformation-related gene 3 protein; Short=TRG-3 [Homo sapiens] >emb|CAK54464.1| SAMM50 [synthetic construct] >gb|AAO85221.1| transformation-related protein 3 [Homo sapiens] >gb|EAW73326.1| sorting and assembly machinery component 50 homolog (S. cerevisiae) [Homo sapiens] >emb|CAG30369.1| dJ796I17.2 [Homo sapiens] >emb|CAK54763.1| SAMM50, partial [synthetic construct]
...
sorting and assembly machinery component 50 homolog [Homo sapiens] >sp|Q9Y512.3| RecName: Full=Sorting and assembly machinery component 50 homolog; AltName: Full=Transformation-related gene 3 protein; Short=TRG-3 [Homo sapiens] >emb|CAK54464.1| SAMM50 [synthetic construct] >gb|AAO85221.1| transformation-related protein 3 [Homo sapiens] >gb|EAW73326.1| sorting and assembly machinery component 50 homolog (S. cerevisiae) [Homo sapiens] >emb|CAG30369.1| dJ796I17.2 [Homo sapiens] >emb|CAK54763.1| SAMM50, partial [synthetic construct]
469 aa protein
accession:NP_056195.3
outer membrane protein assembly factor BamA embly complex, YaeT protein [Neisseria meningitidis OX99.30304] >gb|ANW88705.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis] >gb|ARB70661.1| outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|ARC09688.1| outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|EGC57736.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis M13399]
...
outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|EGC53764.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis OX99.30304] >gb|ANW88705.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis] >gb|ARB70661.1| outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|ARC09688.1| outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|EGC57736.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis M13399]
797 aa protein
accession:WP_002218587.1
outer membrane protein assembly factor BamA pr86 [Pseudomonas aeruginosa PAO1] >gb|KEA10448.1| membrane protein [Pseudomonas aeruginosa C2773C] >emb|SCY97882.1| Outer membrane protein assembly factor BamA precursor [Acinetobacter baumannii] >tpg|HCL2709961.1| outer membrane protein assembly factor BamA [Pseudomonas aeruginosa EF8E] >tpg|HCL2747428.1| outer membrane protein assembly factor BamA [Pseudomonas aeruginosa 449A] >gb|AAG07036.1| outer membrane protein Opr86 [Pseudomonas aeruginosa PAO1]
...
outer membrane protein assembly factor BamA [Pseudomonas] >ref|NP_252338.1| outer membrane protein Opr86 [Pseudomonas aeruginosa PAO1] >gb|KEA10448.1| membrane protein [Pseudomonas aeruginosa C2773C] >emb|SCY97882.1| Outer membrane protein assembly factor BamA precursor [Acinetobacter baumannii] >tpg|HCL2709961.1| outer membrane protein assembly factor BamA [Pseudomonas aeruginosa EF8E] >tpg|HCL2747428.1| outer membrane protein assembly factor BamA [Pseudomonas aeruginosa 449A] >gb|AAG07036.1| outer membrane protein Opr86 [Pseudomonas aeruginosa PAO1]
797 aa protein
accession:WP_003092382.1
Query: outer membrane protein assembly factor BamA
...
outer membrane protein assembly factor BamA [Escherichia coli str. K-12 substr. MG1655]
810 aa protein
accession:NP_414719.1
outer membrane protein assembly factor BamA ocation component BamA [Shewanella oneidensis MR-1] >gb|MDX5996558.1| outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|MEE2027301.1| Outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|QKG96341.1| outer membrane protein assembly factor BamA [Shewanella oneidensis MR-1]
...
outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|AAN54692.2| beta barrel protein translocation component BamA [Shewanella oneidensis MR-1] >gb|MDX5996558.1| outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|MEE2027301.1| Outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|QKG96341.1| outer membrane protein assembly factor BamA [Shewanella oneidensis MR-1]
826 aa protein
accession:WP_011071792.1
DOMAINS: and other(s) domains
...
sorting and assembly machinery component 50 homolog [Mus musculus] >sp|Q8BGH2.1| RecName: Full=Sorting and assembly machinery component 50 homolog [Mus musculus] >gb|AAI19179.1| Sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >gb|AAI19181.1| Sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >gb|EDL04457.1| sorting and assembly machinery component 50 homolog (S. cerevisiae) [Mus musculus] >dbj|BAC30484.1| unnamed protein product [Mus musculus] >dbj|BAC31062.1| unnamed protein product [Mus musculus]
469 aa protein
accession:NP_848729.1
sorting and assembly machinery component 50 homolog [Homo sapiens] >sp|Q9Y512.3| RecName: Full=Sorting and assembly machinery component 50 homolog; AltName: Full=Transformation-related gene 3 protein; Short=TRG-3 [Homo sapiens] >emb|CAK54464.1| SAMM50 [synthetic construct] >gb|AAO85221.1| transformation-related protein 3 [Homo sapiens] >gb|EAW73326.1| sorting and assembly machinery component 50 homolog (S. cerevisiae) [Homo sapiens] >emb|CAG30369.1| dJ796I17.2 [Homo sapiens] >emb|CAK54763.1| SAMM50, partial [synthetic construct]
469 aa protein
accession:NP_056195.3
outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|EGC53764.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis OX99.30304] >gb|ANW88705.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis] >gb|ARB70661.1| outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|ARC09688.1| outer membrane protein assembly factor BamA [Neisseria meningitidis] >gb|EGC57736.1| outer membrane protein assembly complex, YaeT protein [Neisseria meningitidis M13399]
797 aa protein
accession:WP_002218587.1
outer membrane protein assembly factor BamA [Pseudomonas] >ref|NP_252338.1| outer membrane protein Opr86 [Pseudomonas aeruginosa PAO1] >gb|KEA10448.1| membrane protein [Pseudomonas aeruginosa C2773C] >emb|SCY97882.1| Outer membrane protein assembly factor BamA precursor [Acinetobacter baumannii] >tpg|HCL2709961.1| outer membrane protein assembly factor BamA [Pseudomonas aeruginosa EF8E] >tpg|HCL2747428.1| outer membrane protein assembly factor BamA [Pseudomonas aeruginosa 449A] >gb|AAG07036.1| outer membrane protein Opr86 [Pseudomonas aeruginosa PAO1]
797 aa protein
accession:WP_003092382.1
outer membrane protein assembly factor BamA [Escherichia coli str. K-12 substr. MG1655]
810 aa protein
accession:NP_414719.1
outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|AAN54692.2| beta barrel protein translocation component BamA [Shewanella oneidensis MR-1] >gb|MDX5996558.1| outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|MEE2027301.1| Outer membrane protein assembly factor BamA [Shewanella oneidensis] >gb|QKG96341.1| outer membrane protein assembly factor BamA [Shewanella oneidensis MR-1]
826 aa protein
accession:WP_011071792.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 846 | 846 | 100% | 0.0 | 50.54% | WP_011071792.1 | |
| 2 | 580 | 580 | 99% | 0.0 | 39.58% | WP_003092382.1 | |
| 3 | 440 | 440 | 100% | 2e-141 | 33.01% | WP_002218587.1 | |
| 4 | 68.9 | 68.9 | 56% | 1e-10 | 20.91% | NP_848729.1 | |
| 5 | 64.7 | 64.7 | 56% | 2e-09 | 21.12% | NP_056195.3 |