Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_446138.1
transient receptor potential cation channel subfamily V member 6 [Rattus norvegicus]
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Query length:
727 aa
DOMAINS: and other(s) domains
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Ion transport domain-containing protein containing protein [Caenorhabditis elegans]
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Ion transport domain-containing protein [Caenorhabditis elegans] >emb|CCD71163.1| Ion transport domain-containing protein [Caenorhabditis elegans]
756 aa protein
accession:NP_501172.2
nanchung, isoform A nchung, isoform A [Drosophila melanogaster] >gb|AAP57097.1| TRP channel protein nanchung [Drosophila melanogaster]
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nanchung, isoform A [Drosophila melanogaster] >gb|AAF49752.2| nanchung, isoform A [Drosophila melanogaster] >gb|AAP57097.1| TRP channel protein nanchung [Drosophila melanogaster]
833 aa protein
accession:NP_648696.2
transient receptor potential cation channel subfamily V member 6 isoform X1 V member 6 isoform X1 [Danio rerio]
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transient receptor potential cation channel subfamily V member 6 isoform X1 [Danio rerio] >ref|XP_005173526.1| transient receptor potential cation channel subfamily V member 6 isoform X1 [Danio rerio]
709 aa protein
accession:XP_005173525.1
transient receptor potential cation channel subfamily V member 6 channel subfamily V member 6; Short=TrpV6; AltName: Full=CaT-like; Short=CaT-L; AltName: Full=Calcium transport protein 1; Short=CaT1; AltName: Full=Epithelial calcium channel 2; Short=ECaC2 [Homo sapiens]
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transient receptor potential cation channel subfamily V member 6 [Homo sapiens] >sp|Q9H1D0.3| RecName: Full=Transient receptor potential cation channel subfamily V member 6; Short=TrpV6; AltName: Full=CaT-like; Short=CaT-L; AltName: Full=Calcium transport protein 1; Short=CaT1; AltName: Full=Epithelial calcium channel 2; Short=ECaC2 [Homo sapiens]
765 aa protein
accession:NP_061116.5
Query: transient receptor potential cation channel subfamily V member 6
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transient receptor potential cation channel subfamily V member 6 [Rattus norvegicus]
727 aa protein
accession:NP_446138.1
transient receptor potential cation channel subfamily V member 6 channel subfamily V member 6; Short=TrpV6; AltName: Full=Calcium transport protein 1; Short=CaT1; AltName: Full=Epithelial calcium channel 2; Short=ECaC2 [Mus musculus]
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transient receptor potential cation channel subfamily V member 6 [Mus musculus] >sp|Q91WD2.2| RecName: Full=Transient receptor potential cation channel subfamily V member 6; Short=TrpV6; AltName: Full=Calcium transport protein 1; Short=CaT1; AltName: Full=Epithelial calcium channel 2; Short=ECaC2 [Mus musculus]
767 aa protein
accession:NP_071858.3
DOMAINS: and other(s) domains
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Ion transport domain-containing protein [Caenorhabditis elegans] >emb|CCD71163.1| Ion transport domain-containing protein [Caenorhabditis elegans]
756 aa protein
accession:NP_501172.2
nanchung, isoform A [Drosophila melanogaster] >gb|AAF49752.2| nanchung, isoform A [Drosophila melanogaster] >gb|AAP57097.1| TRP channel protein nanchung [Drosophila melanogaster]
833 aa protein
accession:NP_648696.2
transient receptor potential cation channel subfamily V member 6 isoform X1 [Danio rerio] >ref|XP_005173526.1| transient receptor potential cation channel subfamily V member 6 isoform X1 [Danio rerio]
709 aa protein
accession:XP_005173525.1
transient receptor potential cation channel subfamily V member 6 [Homo sapiens] >sp|Q9H1D0.3| RecName: Full=Transient receptor potential cation channel subfamily V member 6; Short=TrpV6; AltName: Full=CaT-like; Short=CaT-L; AltName: Full=Calcium transport protein 1; Short=CaT1; AltName: Full=Epithelial calcium channel 2; Short=ECaC2 [Homo sapiens]
765 aa protein
accession:NP_061116.5
transient receptor potential cation channel subfamily V member 6 [Rattus norvegicus]
727 aa protein
accession:NP_446138.1
transient receptor potential cation channel subfamily V member 6 [Mus musculus] >sp|Q91WD2.2| RecName: Full=Transient receptor potential cation channel subfamily V member 6; Short=TrpV6; AltName: Full=Calcium transport protein 1; Short=CaT1; AltName: Full=Epithelial calcium channel 2; Short=ECaC2 [Mus musculus]
767 aa protein
accession:NP_071858.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1488 | 1488 | 100% | 0.0 | 98.35% | NP_071858.3 | |
2 | 1337 | 1337 | 100% | 0.0 | 89.29% | NP_061116.5 | |
3 | 662 | 662 | 91% | 0.0 | 50.75% | XP_005173525.1 | |
4 | 230 | 230 | 80% | 7e-64 | 27.26% | NP_501172.2 | |
5 | 219 | 219 | 74% | 1e-59 | 27.54% | NP_648696.2 |