Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q9UKF6.1
RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73
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Query length:
684 aa
DOMAINS: and other(s) domains
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Cleavage and polyadenylation specificity factor subunit 3 y factor subunit 3 [Caenorhabditis elegans]
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Cleavage and polyadenylation specificity factor subunit 3 [Caenorhabditis elegans] >emb|CAC44310.2| Cleavage and polyadenylation specificity factor subunit 3 [Caenorhabditis elegans]
707 aa protein
accession:NP_502553.2
cleavage and polyadenylation specificity factor 73 ylation specificity factor 73 [Drosophila melanogaster] >gb|ACL86700.1| CG7698-PA, partial [synthetic construct] >gb|AAF55578.2| cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] >gb|AAM50988.1| RE31408p [Drosophila melanogaster] >gb|AOQ14275.1| Cpsf73-PA [synthetic construct]
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cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] >sp|Q9VE51.2| RecName: Full=Cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] >gb|ACL86700.1| CG7698-PA, partial [synthetic construct] >gb|AAF55578.2| cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] >gb|AAM50988.1| RE31408p [Drosophila melanogaster] >gb|AOQ14275.1| Cpsf73-PA [synthetic construct]
684 aa protein
accession:NP_650738.1
cleavage and polyadenylation specificity factor subunit 3 factor 3 [Danio rerio]
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cleavage and polyadenylation specificity factor subunit 3 [Danio rerio] >gb|AAT68111.1| cleavage and polyadenylation specificity factor 3 [Danio rerio]
690 aa protein
accession:NP_001003836.1
cleavage and polyadenylation specificity factor subunit 3 isoform 1 or subunit 3 isoform X1 [Mus caroli] >ref|XP_028633592.1| cleavage and polyadenylation specificity factor subunit 3 [Grammomys surdaster] >ref|XP_031212792.1| cleavage and polyadenylation specificity factor subunit 3 [Mastomys coucha] >ref|XP_052042013.1| cleavage and polyadenylation specificity factor subunit 3 [Apodemus sylvaticus] >sp|Q9QXK7.2| RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; Short=mRNA 3'-end-processing endonuclease CPSF-73 [Mus musculus] >gb|AAH23297.1| Cleavage and polyadenylation specificity factor 3 [Mus musculus]
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cleavage and polyadenylation specificity factor subunit 3 isoform 1 [Mus musculus] >ref|XP_021034573.1| cleavage and polyadenylation specificity factor subunit 3 isoform X1 [Mus caroli] >ref|XP_028633592.1| cleavage and polyadenylation specificity factor subunit 3 [Grammomys surdaster] >ref|XP_031212792.1| cleavage and polyadenylation specificity factor subunit 3 [Mastomys coucha] >ref|XP_052042013.1| cleavage and polyadenylation specificity factor subunit 3 [Apodemus sylvaticus] >sp|Q9QXK7.2| RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; Short=mRNA 3'-end-processing endonuclease CPSF-73 [Mus musculus] >gb|AAH23297.1| Cleavage and polyadenylation specificity factor 3 [Mus musculus]
684 aa protein
accession:NP_061283.2
Query: RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73
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RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73
684 aa protein
accession:Q9UKF6.1
cleavage and polyadenylation specificity factor subunit 3 isoform d
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cleavage and polyadenylation specificity factor subunit 3 isoform d [Homo sapiens]
688 aa protein
accession:NP_001308765.1
DOMAINS: and other(s) domains
...
Cleavage and polyadenylation specificity factor subunit 3 [Caenorhabditis elegans] >emb|CAC44310.2| Cleavage and polyadenylation specificity factor subunit 3 [Caenorhabditis elegans]
707 aa protein
accession:NP_502553.2
cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] >sp|Q9VE51.2| RecName: Full=Cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] >gb|ACL86700.1| CG7698-PA, partial [synthetic construct] >gb|AAF55578.2| cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] >gb|AAM50988.1| RE31408p [Drosophila melanogaster] >gb|AOQ14275.1| Cpsf73-PA [synthetic construct]
684 aa protein
accession:NP_650738.1
cleavage and polyadenylation specificity factor subunit 3 [Danio rerio] >gb|AAT68111.1| cleavage and polyadenylation specificity factor 3 [Danio rerio]
690 aa protein
accession:NP_001003836.1
cleavage and polyadenylation specificity factor subunit 3 isoform 1 [Mus musculus] >ref|XP_021034573.1| cleavage and polyadenylation specificity factor subunit 3 isoform X1 [Mus caroli] >ref|XP_028633592.1| cleavage and polyadenylation specificity factor subunit 3 [Grammomys surdaster] >ref|XP_031212792.1| cleavage and polyadenylation specificity factor subunit 3 [Mastomys coucha] >ref|XP_052042013.1| cleavage and polyadenylation specificity factor subunit 3 [Apodemus sylvaticus] >sp|Q9QXK7.2| RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; Short=mRNA 3'-end-processing endonuclease CPSF-73 [Mus musculus] >gb|AAH23297.1| Cleavage and polyadenylation specificity factor 3 [Mus musculus]
684 aa protein
accession:NP_061283.2
RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73
684 aa protein
accession:Q9UKF6.1
cleavage and polyadenylation specificity factor subunit 3 isoform d [Homo sapiens]
688 aa protein
accession:NP_001308765.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1412 | 1412 | 100% | 0.0 | 98.54% | NP_061283.2 | |
2 | 1397 | 1397 | 97% | 0.0 | 100.00% | NP_001308765.1 | |
3 | 1258 | 1258 | 99% | 0.0 | 88.82% | NP_001003836.1 | |
4 | 939 | 939 | 98% | 0.0 | 67.30% | NP_650738.1 | |
5 | 793 | 793 | 90% | 0.0 | 59.21% | NP_502553.2 |