Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001127769.1
major histocompatibility complex, class II, DQ beta 1 precursor [Macaca mulatta]
...
Query length:
261 aa
DOMAINS: and other(s) domains
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major histocompatibility complex class II DGB precursor
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major histocompatibility complex class II DGB precursor [Danio rerio] >gb|AAI07844.1| Si:busm1-194e12.12 [Danio rerio]
252 aa protein
accession:NP_001007207.2
histocompatibility 2, class II antigen A, beta 1 precursor ty antigen, A beta chain; Flags: Precursor [Mus musculus] >gb|AAB81531.1| IAbeta subunit [Mus musculus] >gb|EDL10266.1| histocompatibility 2, class II antigen A, beta 1 [Mus musculus] >emb|CAA24768.1| histocompatibility class II antigen [Mus musculus] >dbj|BAE41751.1| unnamed protein product [Mus musculus]
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histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus] >sp|P14483.1| RecName: Full=H-2 class II histocompatibility antigen, A beta chain; Flags: Precursor [Mus musculus] >gb|AAB81531.1| IAbeta subunit [Mus musculus] >gb|EDL10266.1| histocompatibility 2, class II antigen A, beta 1 [Mus musculus] >emb|CAA24768.1| histocompatibility class II antigen [Mus musculus] >dbj|BAE41751.1| unnamed protein product [Mus musculus]
265 aa protein
accession:NP_996988.2
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 eta 2 chain isoform X2 [Homo sapiens] >ref|XP_054185779.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens] >ref|XP_054187298.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens]
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HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens] >ref|XP_054184472.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens] >ref|XP_054185779.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens] >ref|XP_054187298.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens]
256 aa protein
accession:XP_011512862.1
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 eta 2 chain isoform X1 [Homo sapiens] >ref|XP_054185778.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >ref|XP_054187297.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >gb|KAI2541832.1| major histocompatibility complex, class II, DQ beta 2 [Homo sapiens] >gb|KAI4017807.1| major histocompatibility complex, class II, DQ beta 2 [Homo sapiens] >dbj|BAG53563.1| unnamed protein product [Homo sapiens]
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HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >ref|XP_054184471.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >ref|XP_054185778.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >ref|XP_054187297.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >gb|KAI2541832.1| major histocompatibility complex, class II, DQ beta 2 [Homo sapiens] >gb|KAI4017807.1| major histocompatibility complex, class II, DQ beta 2 [Homo sapiens] >dbj|BAG53563.1| unnamed protein product [Homo sapiens]
275 aa protein
accession:XP_005249108.1
Query: major histocompatibility complex, class II, DQ beta 1 precursor
...
major histocompatibility complex, class II, DQ beta 1 precursor [Macaca mulatta]
261 aa protein
accession:NP_001127769.1
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor I DQ-beta [Homo sapiens] >gb|AAU87991.1| MHC class II antigen [Homo sapiens] >gb|AAU88012.1| MHC class II antigen [Homo sapiens] >gb|AGW82920.2| MHC class II antigen [Homo sapiens]
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HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens] >gb|AAA75521.1| MHC HLA-DC3-beta [Homo sapiens] >gb|AAB91991.1| MHC class II DQ-beta [Homo sapiens] >gb|AAU87991.1| MHC class II antigen [Homo sapiens] >gb|AAU88012.1| MHC class II antigen [Homo sapiens] >gb|AGW82920.2| MHC class II antigen [Homo sapiens]
261 aa protein
accession:NP_001230891.1
DOMAINS: and other(s) domains
...
major histocompatibility complex class II DGB precursor [Danio rerio] >gb|AAI07844.1| Si:busm1-194e12.12 [Danio rerio]
252 aa protein
accession:NP_001007207.2
histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus] >sp|P14483.1| RecName: Full=H-2 class II histocompatibility antigen, A beta chain; Flags: Precursor [Mus musculus] >gb|AAB81531.1| IAbeta subunit [Mus musculus] >gb|EDL10266.1| histocompatibility 2, class II antigen A, beta 1 [Mus musculus] >emb|CAA24768.1| histocompatibility class II antigen [Mus musculus] >dbj|BAE41751.1| unnamed protein product [Mus musculus]
265 aa protein
accession:NP_996988.2
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens] >ref|XP_054184472.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens] >ref|XP_054185779.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens] >ref|XP_054187298.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens]
256 aa protein
accession:XP_011512862.1
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >ref|XP_054184471.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >ref|XP_054185778.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >ref|XP_054187297.1| HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1 [Homo sapiens] >gb|KAI2541832.1| major histocompatibility complex, class II, DQ beta 2 [Homo sapiens] >gb|KAI4017807.1| major histocompatibility complex, class II, DQ beta 2 [Homo sapiens] >dbj|BAG53563.1| unnamed protein product [Homo sapiens]
275 aa protein
accession:XP_005249108.1
major histocompatibility complex, class II, DQ beta 1 precursor [Macaca mulatta]
261 aa protein
accession:NP_001127769.1
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens] >gb|AAA75521.1| MHC HLA-DC3-beta [Homo sapiens] >gb|AAB91991.1| MHC class II DQ-beta [Homo sapiens] >gb|AAU87991.1| MHC class II antigen [Homo sapiens] >gb|AAU88012.1| MHC class II antigen [Homo sapiens] >gb|AGW82920.2| MHC class II antigen [Homo sapiens]
261 aa protein
accession:NP_001230891.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 443 | 443 | 100% | 3e-158 | 87.74% | NP_001230891.1 | |
2 | 368 | 368 | 96% | 1e-128 | 71.65% | NP_996988.2 | |
3 | 137 | 137 | 77% | 2e-38 | 34.78% | NP_001007207.2 | |
4 | 417 | 417 | 98% | 6e-148 | 82.81% | XP_011512862.1 | |
5 | 413 | 413 | 96% | 3e-146 | 83.00% | XP_005249108.1 |