Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_005723.2
DNA repair protein RAD50 [Homo sapiens] >sp|Q92878.1| RecName: Full=DNA repair protein RAD50; Short=hRAD50 [Homo sapiens] >gb|AAB07119.1| Rad50 [Homo sapiens] >gb|AAD50325.1| RAD50-2 protein [Homo sapiens] >gb|AAI36437.1| RAD50 homolog (S. cerevisiae) [Homo sapiens] >gb|EAW62329.1| RAD50 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens] >gb|KAI2538798.1| RAD50 double strand break repair protein [Homo sapiens]
...
Query length:
1312 aa
DOMAINS: and other(s) domains
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rad50, isoform E rad50, isoform E [Drosophila melanogaster] >gb|AOQ11330.1| rad50-RE [synthetic construct]
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rad50, isoform E [Drosophila melanogaster] >gb|AFH08214.1| rad50, isoform E [Drosophila melanogaster] >gb|AOQ11330.1| rad50-RE [synthetic construct]
1318 aa protein
accession:NP_001246461.1
DNA repair protein RAD50 isoform X1 otein RAD50 [Glycine soja] >gb|KAG4376952.1| hypothetical protein GLYMA_18G002400v4 [Glycine max] >gb|KAG4923055.1| hypothetical protein JHK87_048595 [Glycine soja] >gb|KAG5090177.1| hypothetical protein JHK82_048955 [Glycine max] >gb|KAH1152504.1| hypothetical protein GYH30_048568 [Glycine max] >gb|KAH1152505.1| hypothetical protein GYH30_048568 [Glycine max]
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DNA repair protein RAD50 isoform X1 [Glycine max] >ref|XP_028213220.1| DNA repair protein RAD50 [Glycine soja] >gb|KAG4376952.1| hypothetical protein GLYMA_18G002400v4 [Glycine max] >gb|KAG4923055.1| hypothetical protein JHK87_048595 [Glycine soja] >gb|KAG5090177.1| hypothetical protein JHK82_048955 [Glycine max] >gb|KAH1152504.1| hypothetical protein GYH30_048568 [Glycine max] >gb|KAH1152505.1| hypothetical protein GYH30_048568 [Glycine max]
1316 aa protein
accession:XP_003552170.1
DNA repair-recombination protein (RAD50) protein RAD50; Short=AtRAD50 [Arabidopsis thaliana] >gb|AAD15407.2| putative RAD50 DNA repair protein [Arabidopsis thaliana] >gb|AAF36810.1| DNA repair-recombination protein [Arabidopsis thaliana] >gb|AAM98090.1| At2g31970/F22D22.28 [Arabidopsis thaliana] >gb|AAO64758.1| At2g31970/F22D22.28 [Arabidopsis thaliana] >gb|AEC08614.1| DNA repair-recombination protein (RAD50) [Arabidopsis thaliana]
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DNA repair-recombination protein (RAD50) [Arabidopsis thaliana] >sp|Q9SL02.2| RecName: Full=DNA repair protein RAD50; Short=AtRAD50 [Arabidopsis thaliana] >gb|AAD15407.2| putative RAD50 DNA repair protein [Arabidopsis thaliana] >gb|AAF36810.1| DNA repair-recombination protein [Arabidopsis thaliana] >gb|AAM98090.1| At2g31970/F22D22.28 [Arabidopsis thaliana] >gb|AAO64758.1| At2g31970/F22D22.28 [Arabidopsis thaliana] >gb|AEC08614.1| DNA repair-recombination protein (RAD50) [Arabidopsis thaliana]
1316 aa protein
accession:NP_565733.1
DNA recombination/repair protein repair protein RAD50; AltName: Full=DNA recombination/repair protein [Dictyostelium discoideum] >gb|EAL61067.1| DNA recombination/repair protein [Dictyostelium discoideum AX4]
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DNA recombination/repair protein [Dictyostelium discoideum AX4] >sp|Q54CS9.1| RecName: Full=DNA repair protein RAD50; AltName: Full=DNA recombination/repair protein [Dictyostelium discoideum] >gb|EAL61067.1| DNA recombination/repair protein [Dictyostelium discoideum AX4]
1351 aa protein
accession:XP_629462.1
Query: DNA repair protein RAD50 Full=DNA repair protein RAD50; Short=hRAD50 [Homo sapiens] >gb|AAB07119.1| Rad50 [Homo sapiens] >gb|AAD50325.1| RAD50-2 protein [Homo sapiens] >gb|AAI36437.1| RAD50 homolog (S. cerevisiae) [Homo sapiens] >gb|EAW62329.1| RAD50 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens] >gb|KAI2538798.1| RAD50 double strand break repair protein [Homo sapiens]
...
DNA repair protein RAD50 [Homo sapiens] >sp|Q92878.1| RecName: Full=DNA repair protein RAD50; Short=hRAD50 [Homo sapiens] >gb|AAB07119.1| Rad50 [Homo sapiens] >gb|AAD50325.1| RAD50-2 protein [Homo sapiens] >gb|AAI36437.1| RAD50 homolog (S. cerevisiae) [Homo sapiens] >gb|EAW62329.1| RAD50 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens] >gb|KAI2538798.1| RAD50 double strand break repair protein [Homo sapiens]
1312 aa protein
accession:NP_005723.2
DNA repair protein RAD50 epair protein RAD50 [Danio rerio]
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DNA repair protein RAD50 [Danio rerio] >ref|XP_696859.4| DNA repair protein RAD50 [Danio rerio]
1312 aa protein
accession:XP_005167995.1
DOMAINS: and other(s) domains
...
rad50, isoform E [Drosophila melanogaster] >gb|AFH08214.1| rad50, isoform E [Drosophila melanogaster] >gb|AOQ11330.1| rad50-RE [synthetic construct]
1318 aa protein
accession:NP_001246461.1
DNA repair protein RAD50 isoform X1 [Glycine max] >ref|XP_028213220.1| DNA repair protein RAD50 [Glycine soja] >gb|KAG4376952.1| hypothetical protein GLYMA_18G002400v4 [Glycine max] >gb|KAG4923055.1| hypothetical protein JHK87_048595 [Glycine soja] >gb|KAG5090177.1| hypothetical protein JHK82_048955 [Glycine max] >gb|KAH1152504.1| hypothetical protein GYH30_048568 [Glycine max] >gb|KAH1152505.1| hypothetical protein GYH30_048568 [Glycine max]
1316 aa protein
accession:XP_003552170.1
DNA repair-recombination protein (RAD50) [Arabidopsis thaliana] >sp|Q9SL02.2| RecName: Full=DNA repair protein RAD50; Short=AtRAD50 [Arabidopsis thaliana] >gb|AAD15407.2| putative RAD50 DNA repair protein [Arabidopsis thaliana] >gb|AAF36810.1| DNA repair-recombination protein [Arabidopsis thaliana] >gb|AAM98090.1| At2g31970/F22D22.28 [Arabidopsis thaliana] >gb|AAO64758.1| At2g31970/F22D22.28 [Arabidopsis thaliana] >gb|AEC08614.1| DNA repair-recombination protein (RAD50) [Arabidopsis thaliana]
1316 aa protein
accession:NP_565733.1
DNA recombination/repair protein [Dictyostelium discoideum AX4] >sp|Q54CS9.1| RecName: Full=DNA repair protein RAD50; AltName: Full=DNA recombination/repair protein [Dictyostelium discoideum] >gb|EAL61067.1| DNA recombination/repair protein [Dictyostelium discoideum AX4]
1351 aa protein
accession:XP_629462.1
DNA repair protein RAD50 [Homo sapiens] >sp|Q92878.1| RecName: Full=DNA repair protein RAD50; Short=hRAD50 [Homo sapiens] >gb|AAB07119.1| Rad50 [Homo sapiens] >gb|AAD50325.1| RAD50-2 protein [Homo sapiens] >gb|AAI36437.1| RAD50 homolog (S. cerevisiae) [Homo sapiens] >gb|EAW62329.1| RAD50 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens] >gb|KAI2538798.1| RAD50 double strand break repair protein [Homo sapiens]
1312 aa protein
accession:NP_005723.2
DNA repair protein RAD50 [Danio rerio] >ref|XP_696859.4| DNA repair protein RAD50 [Danio rerio]
1312 aa protein
accession:XP_005167995.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1920 | 1920 | 100% | 0.0 | 70.96% | XP_005167995.1 | |
2 | 545 | 545 | 99% | 5e-170 | 31.55% | XP_003552170.1 | |
3 | 530 | 530 | 98% | 2e-164 | 31.08% | NP_565733.1 | |
4 | 530 | 530 | 99% | 4e-164 | 29.92% | XP_629462.1 | |
5 | 512 | 512 | 99% | 6e-158 | 29.43% | NP_001246461.1 |