Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q9NRA1.2
RecName: Full=Platelet-derived growth factor C; Short=PDGF-C; AltName: Full=Fallotein; AltName: Full=Spinal cord-derived growth factor; Short=SCDGF; AltName: Full=VEGF-E; Contains: RecName: Full=Platelet-derived growth factor C, latent form; Short=PDGFC latent form; Contains: RecName: Full=Platelet-derived growth factor C, receptor-binding form; Short=PDGFC receptor-binding form; Flags: Precursor
...
Query length:
345 aa
DOMAINS: and other(s) domains
...
platelet-derived growth factor C isoform X1 factor C isoform X1 [Danio rerio]
...
platelet-derived growth factor C isoform X1 [Danio rerio] >ref|XP_689054.3| platelet-derived growth factor C isoform X1 [Danio rerio]
343 aa protein
accession:XP_021330008.1
platelet-derived growth factor C isoform 1 precursor factor C; Short=PDGF-C; AltName: Full=Fallotein; AltName: Full=Spinal cord-derived growth factor; Short=SCDGF; AltName: Full=VEGF-E; Contains: RecName: Full=Platelet-derived growth factor C, latent form; Short=PDGFC latent form; Contains: RecName: Full=Platelet-derived growth factor C, receptor-binding form; Short=PDGFC receptor-binding form; Flags: Precursor [Mus musculus] >gb|AAF22516.1| fallotein [Mus musculus] >gb|AAK58566.1| platelet-derived growth factor C [Mus musculus] >gb|EDL15444.1| platelet-derived growth factor, C polypeptide, isoform CRA_c [Mus musculus] >dbj|BAC28455.1| unnamed protein product [Mus musculus] >dbj|BAC31358.1| unnamed protein product [Mus musculus]
...
platelet-derived growth factor C isoform 1 precursor [Mus musculus] >sp|Q8CI19.2| RecName: Full=Platelet-derived growth factor C; Short=PDGF-C; AltName: Full=Fallotein; AltName: Full=Spinal cord-derived growth factor; Short=SCDGF; AltName: Full=VEGF-E; Contains: RecName: Full=Platelet-derived growth factor C, latent form; Short=PDGFC latent form; Contains: RecName: Full=Platelet-derived growth factor C, receptor-binding form; Short=PDGFC receptor-binding form; Flags: Precursor [Mus musculus] >gb|AAF22516.1| fallotein [Mus musculus] >gb|AAK58566.1| platelet-derived growth factor C [Mus musculus] >gb|EDL15444.1| platelet-derived growth factor, C polypeptide, isoform CRA_c [Mus musculus] >dbj|BAC28455.1| unnamed protein product [Mus musculus] >dbj|BAC31358.1| unnamed protein product [Mus musculus]
345 aa protein
accession:NP_064355.1
platelet-derived growth factor C isoform 2
...
platelet-derived growth factor C isoform 2 [Mus musculus]
275 aa protein
accession:NP_001344675.1
Query: RecName: Full=Platelet-derived growth factor C; Short=PDGF-C; AltName: Full=Fallotein; AltName: Full=Spinal cord-derived growth factor; Short=SCDGF; AltName: Full=VEGF-E; Contains: RecName: Full=Platelet-derived growth factor C, latent form; Short=PDGFC latent form; Contains: RecName: Full=Platelet-derived growth factor C, receptor-binding form; Short=PDGFC receptor-binding form; Flags: Precursor
...
RecName: Full=Platelet-derived growth factor C; Short=PDGF-C; AltName: Full=Fallotein; AltName: Full=Spinal cord-derived growth factor; Short=SCDGF; AltName: Full=VEGF-E; Contains: RecName: Full=Platelet-derived growth factor C, latent form; Short=PDGFC latent form; Contains: RecName: Full=Platelet-derived growth factor C, receptor-binding form; Short=PDGFC receptor-binding form; Flags: Precursor
345 aa protein
accession:Q9NRA1.2
platelet-derived growth factor C isoform X1 th factor C isoform X1 [Homo sapiens]
...
platelet-derived growth factor C isoform X1 [Homo sapiens] >ref|XP_054206486.1| platelet-derived growth factor C isoform X1 [Homo sapiens]
310 aa protein
accession:XP_016863944.1
platelet-derived growth factor C isoform X2
...
platelet-derived growth factor C isoform X2 [Homo sapiens]
334 aa protein
accession:XP_047271925.1
DOMAINS: and other(s) domains
...
platelet-derived growth factor C isoform X1 [Danio rerio] >ref|XP_689054.3| platelet-derived growth factor C isoform X1 [Danio rerio]
343 aa protein
accession:XP_021330008.1
platelet-derived growth factor C isoform 1 precursor [Mus musculus] >sp|Q8CI19.2| RecName: Full=Platelet-derived growth factor C; Short=PDGF-C; AltName: Full=Fallotein; AltName: Full=Spinal cord-derived growth factor; Short=SCDGF; AltName: Full=VEGF-E; Contains: RecName: Full=Platelet-derived growth factor C, latent form; Short=PDGFC latent form; Contains: RecName: Full=Platelet-derived growth factor C, receptor-binding form; Short=PDGFC receptor-binding form; Flags: Precursor [Mus musculus] >gb|AAF22516.1| fallotein [Mus musculus] >gb|AAK58566.1| platelet-derived growth factor C [Mus musculus] >gb|EDL15444.1| platelet-derived growth factor, C polypeptide, isoform CRA_c [Mus musculus] >dbj|BAC28455.1| unnamed protein product [Mus musculus] >dbj|BAC31358.1| unnamed protein product [Mus musculus]
345 aa protein
accession:NP_064355.1
platelet-derived growth factor C isoform 2 [Mus musculus]
275 aa protein
accession:NP_001344675.1
RecName: Full=Platelet-derived growth factor C; Short=PDGF-C; AltName: Full=Fallotein; AltName: Full=Spinal cord-derived growth factor; Short=SCDGF; AltName: Full=VEGF-E; Contains: RecName: Full=Platelet-derived growth factor C, latent form; Short=PDGFC latent form; Contains: RecName: Full=Platelet-derived growth factor C, receptor-binding form; Short=PDGFC receptor-binding form; Flags: Precursor
345 aa protein
accession:Q9NRA1.2
platelet-derived growth factor C isoform X1 [Homo sapiens] >ref|XP_054206486.1| platelet-derived growth factor C isoform X1 [Homo sapiens]
310 aa protein
accession:XP_016863944.1
platelet-derived growth factor C isoform X2 [Homo sapiens]
334 aa protein
accession:XP_047271925.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 637 | 637 | 88% | 0.0 | 100.00% | XP_016863944.1 | |
2 | 632 | 632 | 97% | 0.0 | 87.20% | NP_064355.1 | |
3 | 452 | 452 | 93% | 2e-159 | 64.40% | XP_021330008.1 | |
4 | 637 | 637 | 88% | 0.0 | 99.67% | XP_047271925.1 | |
5 | 523 | 523 | 79% | 0.0 | 88.69% | NP_001344675.1 |