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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_630782.1 hypothetical protein SCO6709 [Streptomyces coelicolor A3(2)] ... Query length: 341 aa
DNA ligase D 223.1| ATP-dependent DNA ligase subunit; 5'-2-deoxyribose-5-phosphate (dRP) lyase [Bacillus subtilis subsp. subtilis str. 168] >sp|O34398.1| RecName: Full=Bifunctional non-homologous end joining protein LigD; AltName: Full=NHEJ DNA polymerase; Includes: RecName: Full=DNA ligase; Short=Lig; AltName: Full=Polydeoxyribonucleotide synthase [ATP]; Includes: RecName: Full=DNA repair polymerase; Short=Pol; AltName: Full=Polymerase/primase [Bacillus subtilis subsp. subtilis str. 168] >dbj|BAM51976.1| ATP-dependent DNA ligase [Bacillus subtilis BEST7613] >gb|AFQ57268.1| ATP-dependent DNA ligase subunit [Bacillus subtilis QB928] >gb|AGG60705.1| ATP-dependent DNA ligase subunit YkoU [Bacillus subtilis subsp. subtilis 6051-HGW] >gb|AIC39744.1| ATP-dependent DNA ligase [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174] >gb|AIC43976.1| ATP-dependent DNA ligase [Bacillus subtilis subsp. subtilis str. AG1839] ...
DNA ligase D [Bacillales] >ref|NP_389223.1| ATP-dependent DNA ligase subunit; 5'-2-deoxyribose-5-phosphate (dRP) lyase [Bacillus subtilis subsp. subtilis str. 168] >sp|O34398.1| RecName: Full=Bifunctional non-homologous end joining protein LigD; AltName: Full=NHEJ DNA polymerase; Includes: RecName: Full=DNA ligase; Short=Lig; AltName: Full=Polydeoxyribonucleotide synthase [ATP]; Includes: RecName: Full=DNA repair polymerase; Short=Pol; AltName: Full=Polymerase/primase [Bacillus subtilis subsp. subtilis str. 168] >dbj|BAM51976.1| ATP-dependent DNA ligase [Bacillus subtilis BEST7613] >gb|AFQ57268.1| ATP-dependent DNA ligase subunit [Bacillus subtilis QB928] >gb|AGG60705.1| ATP-dependent DNA ligase subunit YkoU [Bacillus subtilis subsp. subtilis 6051-HGW] >gb|AIC39744.1| ATP-dependent DNA ligase [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174] >gb|AIC43976.1| ATP-dependent DNA ligase [Bacillus subtilis subsp. subtilis str. AG1839]
611 aa protein
accession:WP_010886495.1
non-homologous end-joining DNA ligase -joining DNA ligase [Streptomyces sp. RK76] >gb|MDX2923854.1| non-homologous end-joining DNA ligase [Streptomyces sp. NRRL_B-16638] >gb|MDX3317569.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME03-5684b] >gb|MDX3348118.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME02-6979A] >gb|MDX3368592.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME02-6987-2C] ...
non-homologous end-joining DNA ligase [Streptomyces] >gb|MBQ0950284.1| non-homologous end-joining DNA ligase [Streptomyces sp. RK76] >gb|MDX2923854.1| non-homologous end-joining DNA ligase [Streptomyces sp. NRRL_B-16638] >gb|MDX3317569.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME03-5684b] >gb|MDX3348118.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME02-6979A] >gb|MDX3368592.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME02-6987-2C]
301 aa protein
accession:WP_161270581.1
DNA ligase D 828.1| multifunctional non-homologous end joining protein LigD [Pseudomonas aeruginosa PAO1] >sp|Q9I1X7.1| RecName: Full=Multifunctional non-homologous end joining protein LigD; AltName: Full=NHEJ DNA polymerase; Includes: RecName: Full=3'-phosphoesterase; Short=3'-ribonuclease/3'-phosphatase; Includes: RecName: Full=DNA ligase D; Short=LigD; AltName: Full=Polydeoxyribonucleotide synthase [ATP]; Includes: RecName: Full=DNA repair polymerase; Short=Pol; AltName: Full=Polymerase/primase [Pseudomonas aeruginosa PAO1] >gb|AAG05526.1| probable ATP-dependent DNA ligase [Pseudomonas aeruginosa PAO1] >gb|AGV59241.1| DNA ligase D [Pseudomonas aeruginosa PAO581] >gb|AGY63058.1| DNA ligase D [Pseudomonas aeruginosa PAO1-VE2] >gb|AGY70899.1| DNA ligase D [Pseudomonas aeruginosa PAO1-VE13] >gb|AOP58317.1| ATP-dependent DNA ligase [Pseudomonas aeruginosa] ...
DNA ligase D [Pseudomonas aeruginosa] >ref|NP_250828.1| multifunctional non-homologous end joining protein LigD [Pseudomonas aeruginosa PAO1] >sp|Q9I1X7.1| RecName: Full=Multifunctional non-homologous end joining protein LigD; AltName: Full=NHEJ DNA polymerase; Includes: RecName: Full=3'-phosphoesterase; Short=3'-ribonuclease/3'-phosphatase; Includes: RecName: Full=DNA ligase D; Short=LigD; AltName: Full=Polydeoxyribonucleotide synthase [ATP]; Includes: RecName: Full=DNA repair polymerase; Short=Pol; AltName: Full=Polymerase/primase [Pseudomonas aeruginosa PAO1] >gb|AAG05526.1| probable ATP-dependent DNA ligase [Pseudomonas aeruginosa PAO1] >gb|AGV59241.1| DNA ligase D [Pseudomonas aeruginosa PAO581] >gb|AGY63058.1| DNA ligase D [Pseudomonas aeruginosa PAO1-VE2] >gb|AGY70899.1| DNA ligase D [Pseudomonas aeruginosa PAO1-VE13] >gb|AOP58317.1| ATP-dependent DNA ligase [Pseudomonas aeruginosa]
840 aa protein
accession:WP_003113639.1
Query: hypothetical protein SCO6709 ...
hypothetical protein SCO6709 [Streptomyces coelicolor A3(2)]
341 aa protein
accession:NP_630782.1
non-homologous end-joining DNA ligase in Rv3730c [Mycobacterium tuberculosis H37Rv] >gb|AGJ69887.1| hypothetical protein J112_20055 [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AGL29207.1| hypothetical protein J113_26045 [Mycobacterium tuberculosis CAS/NITR204] >gb|AGL33240.1| hypothetical protein J114_19930 [Mycobacterium tuberculosis EAI5/NITR206] >gb|AHM09512.1| ATP-dependent DNA ligase [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY61291.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFD41390.1| conserved hypothetical protein [Mycobacterium tuberculosis variant africanum K85] >gb|EFO73014.1| hypothetical protein TMAG_00221 [Mycobacterium tuberculosis SUMu001] >gb|EFP49275.1| hypothetical protein TMKG_00973 [Mycobacterium tuberculosis SUMu011] >gb|EFP52862.1| hypothetical protein TMLG_00221 [Mycobacterium tuberculosis SUMu012] >gb|EPZ66897.1| hypothetical protein TBKG_02500 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK25099.1| ATP-dependent DNA ligase [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM30201.1| DNA ligase LigD [Mycobacterium tuberculosis 2101HD] >gb|KAN90238.1| DNA ligase LigD [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KBG11664.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010071] >gb|KBH08360.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010128] >gb|KBH32977.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010137] >gb|KBH70745.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020136] >gb|KBI26877.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020173] >gb|KBI39284.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020176] ...
non-homologous end-joining DNA ligase [Mycobacterium] >ref|NP_218247.1| hypothetical protein Rv3730c [Mycobacterium tuberculosis H37Rv] >gb|AGJ69887.1| hypothetical protein J112_20055 [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AGL29207.1| hypothetical protein J113_26045 [Mycobacterium tuberculosis CAS/NITR204] >gb|AGL33240.1| hypothetical protein J114_19930 [Mycobacterium tuberculosis EAI5/NITR206] >gb|AHM09512.1| ATP-dependent DNA ligase [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY61291.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFD41390.1| conserved hypothetical protein [Mycobacterium tuberculosis variant africanum K85] >gb|EFO73014.1| hypothetical protein TMAG_00221 [Mycobacterium tuberculosis SUMu001] >gb|EFP49275.1| hypothetical protein TMKG_00973 [Mycobacterium tuberculosis SUMu011] >gb|EFP52862.1| hypothetical protein TMLG_00221 [Mycobacterium tuberculosis SUMu012] >gb|EPZ66897.1| hypothetical protein TBKG_02500 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK25099.1| ATP-dependent DNA ligase [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM30201.1| DNA ligase LigD [Mycobacterium tuberculosis 2101HD] >gb|KAN90238.1| DNA ligase LigD [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KBG11664.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010071] >gb|KBH08360.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010128] >gb|KBH32977.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010137] >gb|KBH70745.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020136] >gb|KBI26877.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020173] >gb|KBI39284.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020176]
346 aa protein
accession:WP_003899657.1
DNA polymerase domain-containing protein Rv0269c [Mycobacterium tuberculosis H37Rv] >gb|AGJ66267.1| hypothetical protein J112_01450 [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AHM05955.1| hypothetical protein BCGT_0034 [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY61714.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFO76591.1| hypothetical protein TMAG_01408 [Mycobacterium tuberculosis SUMu001] >gb|EFP16802.1| hypothetical protein TMBG_02743 [Mycobacterium tuberculosis SUMu002] >gb|EFP32648.1| hypothetical protein TMFG_03234 [Mycobacterium tuberculosis SUMu006] >gb|EFP48900.1| hypothetical protein TMKG_01457 [Mycobacterium tuberculosis SUMu011] >gb|EFP56464.1| hypothetical protein TMLG_01018 [Mycobacterium tuberculosis SUMu012] >gb|EPZ63157.1| hypothetical protein TBKG_01120 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK28451.1| DNA polymerase [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM34781.1| DNA polymerase LigD [Mycobacterium tuberculosis 2101HD] >gb|KAN88597.1| DNA polymerase LigD [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KAO04870.1| DNA polymerase LigD [Mycobacterium tuberculosis variant bovis B2 7505] ...
DNA polymerase domain-containing protein [Mycobacterium] >ref|NP_214783.1| hypothetical protein Rv0269c [Mycobacterium tuberculosis H37Rv] >gb|AGJ66267.1| hypothetical protein J112_01450 [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AHM05955.1| hypothetical protein BCGT_0034 [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY61714.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFO76591.1| hypothetical protein TMAG_01408 [Mycobacterium tuberculosis SUMu001] >gb|EFP16802.1| hypothetical protein TMBG_02743 [Mycobacterium tuberculosis SUMu002] >gb|EFP32648.1| hypothetical protein TMFG_03234 [Mycobacterium tuberculosis SUMu006] >gb|EFP48900.1| hypothetical protein TMKG_01457 [Mycobacterium tuberculosis SUMu011] >gb|EFP56464.1| hypothetical protein TMLG_01018 [Mycobacterium tuberculosis SUMu012] >gb|EPZ63157.1| hypothetical protein TBKG_01120 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK28451.1| DNA polymerase [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM34781.1| DNA polymerase LigD [Mycobacterium tuberculosis 2101HD] >gb|KAN88597.1| DNA polymerase LigD [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KAO04870.1| DNA polymerase LigD [Mycobacterium tuberculosis variant bovis B2 7505]
397 aa protein
accession:WP_003401386.1

Descriptions

Best hits

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Alignments Download
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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
non-homologous end-joining DNA ligase [Mycobacterium] >ref|NP_218247.1| hypothetical protein Rv3730c [Mycobacterium tuberculosis H37Rv] >gb|AGJ69887.1| hypothetical protein J112_20055 [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AGL29207.1| hypothetical protein J113_26045 [Mycobacterium tuberculosis CAS/NITR204] >gb|AGL33240.1| hypothetical protein J114_19930 [Mycobacterium tuberculosis EAI5/NITR206] >gb|AHM09512.1| ATP-dependent DNA ligase [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY61291.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFD41390.1| conserved hypothetical protein [Mycobacterium tuberculosis variant africanum K85] >gb|EFO73014.1| hypothetical protein TMAG_00221 [Mycobacterium tuberculosis SUMu001] >gb|EFP49275.1| hypothetical protein TMKG_00973 [Mycobacterium tuberculosis SUMu011] >gb|EFP52862.1| hypothetical protein TMLG_00221 [Mycobacterium tuberculosis SUMu012] >gb|EPZ66897.1| hypothetical protein TBKG_02500 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK25099.1| ATP-dependent DNA ligase [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM30201.1| DNA ligase LigD [Mycobacterium tuberculosis 2101HD] >gb|KAN90238.1| DNA ligase LigD [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KBG11664.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010071] >gb|KBH08360.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010128] >gb|KBH32977.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL010137] >gb|KBH70745.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020136] >gb|KBI26877.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020173] >gb|KBI39284.1| DNA ligase LigD [Mycobacterium tuberculosis variant africanum MAL020176]
372 372 97% 8e-12859.10% WP_003899657.1
2
non-homologous end-joining DNA ligase [Streptomyces] >gb|MBQ0950284.1| non-homologous end-joining DNA ligase [Streptomyces sp. RK76] >gb|MDX2923854.1| non-homologous end-joining DNA ligase [Streptomyces sp. NRRL_B-16638] >gb|MDX3317569.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME03-5684b] >gb|MDX3348118.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME02-6979A] >gb|MDX3368592.1| non-homologous end-joining DNA ligase [Streptomyces sp. ME02-6987-2C]
152 152 74% 2e-4236.82% WP_161270581.1
3
DNA ligase D [Pseudomonas aeruginosa] >ref|NP_250828.1| multifunctional non-homologous end joining protein LigD [Pseudomonas aeruginosa PAO1] >sp|Q9I1X7.1| RecName: Full=Multifunctional non-homologous end joining protein LigD; AltName: Full=NHEJ DNA polymerase; Includes: RecName: Full=3'-phosphoesterase; Short=3'-ribonuclease/3'-phosphatase; Includes: RecName: Full=DNA ligase D; Short=LigD; AltName: Full=Polydeoxyribonucleotide synthase [ATP]; Includes: RecName: Full=DNA repair polymerase; Short=Pol; AltName: Full=Polymerase/primase [Pseudomonas aeruginosa PAO1] >gb|AAG05526.1| probable ATP-dependent DNA ligase [Pseudomonas aeruginosa PAO1] >gb|AGV59241.1| DNA ligase D [Pseudomonas aeruginosa PAO581] >gb|AGY63058.1| DNA ligase D [Pseudomonas aeruginosa PAO1-VE2] >gb|AGY70899.1| DNA ligase D [Pseudomonas aeruginosa PAO1-VE13] >gb|AOP58317.1| ATP-dependent DNA ligase [Pseudomonas aeruginosa]
150 150 78% 5e-3934.31% WP_003113639.1
4
DNA ligase D [Bacillales] >ref|NP_389223.1| ATP-dependent DNA ligase subunit; 5'-2-deoxyribose-5-phosphate (dRP) lyase [Bacillus subtilis subsp. subtilis str. 168] >sp|O34398.1| RecName: Full=Bifunctional non-homologous end joining protein LigD; AltName: Full=NHEJ DNA polymerase; Includes: RecName: Full=DNA ligase; Short=Lig; AltName: Full=Polydeoxyribonucleotide synthase [ATP]; Includes: RecName: Full=DNA repair polymerase; Short=Pol; AltName: Full=Polymerase/primase [Bacillus subtilis subsp. subtilis str. 168] >dbj|BAM51976.1| ATP-dependent DNA ligase [Bacillus subtilis BEST7613] >gb|AFQ57268.1| ATP-dependent DNA ligase subunit [Bacillus subtilis QB928] >gb|AGG60705.1| ATP-dependent DNA ligase subunit YkoU [Bacillus subtilis subsp. subtilis 6051-HGW] >gb|AIC39744.1| ATP-dependent DNA ligase [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174] >gb|AIC43976.1| ATP-dependent DNA ligase [Bacillus subtilis subsp. subtilis str. AG1839]
132 132 78% 5e-3331.23% WP_010886495.1
5
DNA polymerase domain-containing protein [Mycobacterium] >ref|NP_214783.1| hypothetical protein Rv0269c [Mycobacterium tuberculosis H37Rv] >gb|AGJ66267.1| hypothetical protein J112_01450 [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AHM05955.1| hypothetical protein BCGT_0034 [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY61714.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFO76591.1| hypothetical protein TMAG_01408 [Mycobacterium tuberculosis SUMu001] >gb|EFP16802.1| hypothetical protein TMBG_02743 [Mycobacterium tuberculosis SUMu002] >gb|EFP32648.1| hypothetical protein TMFG_03234 [Mycobacterium tuberculosis SUMu006] >gb|EFP48900.1| hypothetical protein TMKG_01457 [Mycobacterium tuberculosis SUMu011] >gb|EFP56464.1| hypothetical protein TMLG_01018 [Mycobacterium tuberculosis SUMu012] >gb|EPZ63157.1| hypothetical protein TBKG_01120 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK28451.1| DNA polymerase [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM34781.1| DNA polymerase LigD [Mycobacterium tuberculosis 2101HD] >gb|KAN88597.1| DNA polymerase LigD [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KAO04870.1| DNA polymerase LigD [Mycobacterium tuberculosis variant bovis B2 7505]
292 292 87% 2e-9550.00% WP_003401386.1