Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q9NRF9.1
RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=Arsenic-transactivated protein; Short=AsTP; AltName: Full=Chromatin accessibility complex 17 kDa protein; Short=CHRAC-17; Short=HuCHRAC17; AltName: Full=DNA polymerase II subunit 3; AltName: Full=DNA polymerase epsilon subunit p17
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Query length:
147 aa
DOMAINS: and other(s) domains
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nuclear factor Y, subunit B3 =Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; Short=AtNF-YB3; AltName: Full=Transcriptional activator HAP3C [Arabidopsis thaliana] >gb|KAG7547603.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica] >gb|KAG7615966.1| Histone-fold [Arabidopsis thaliana x Arabidopsis arenosa] >gb|AAO39912.1| At4g14540 [Arabidopsis thaliana] >gb|AEE83458.1| nuclear factor Y, subunit B3 [Arabidopsis thaliana] >gb|KAG7620454.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica]
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nuclear factor Y, subunit B3 [Arabidopsis thaliana] >sp|O23310.1| RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; Short=AtNF-YB3; AltName: Full=Transcriptional activator HAP3C [Arabidopsis thaliana] >gb|KAG7547603.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica] >gb|KAG7615966.1| Histone-fold [Arabidopsis thaliana x Arabidopsis arenosa] >gb|AAO39912.1| At4g14540 [Arabidopsis thaliana] >gb|AEE83458.1| nuclear factor Y, subunit B3 [Arabidopsis thaliana] >gb|KAG7620454.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica]
161 aa protein
accession:NP_193190.1
chromatin accessibility complex 14kD protein epsilon subunit 3; AltName: Full=Chromatin accessibility complex 14kD protein; AltName: Full=Histone-fold protein CHRAC subunit [Drosophila melanogaster] >pdb|2BYK|B Chain B, CHRAC-14 [Drosophila melanogaster] >pdb|2BYK|D Chain D, CHRAC-14 [Drosophila melanogaster] >pdb|2BYM|B Chain B, CHRAC-14 [Drosophila melanogaster] >pdb|2BYM|D Chain D, CHRAC-14 [Drosophila melanogaster] >gb|ACL86411.1| Chrac-14-PA, partial [synthetic construct] >gb|AAL48592.1| RE06926p [Drosophila melanogaster] >gb|AAO41168.1| chromatin accessibility complex 14kD protein [Drosophila melanogaster] >gb|ACL91065.1| Chrac-14-PA [synthetic construct] >gb|ANY27634.1| GEO01605p1 [Drosophila melanogaster]
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chromatin accessibility complex 14kD protein [Drosophila melanogaster] >sp|Q9V444.1| RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=Chromatin accessibility complex 14kD protein; AltName: Full=Histone-fold protein CHRAC subunit [Drosophila melanogaster] >pdb|2BYK|B Chain B, CHRAC-14 [Drosophila melanogaster] >pdb|2BYK|D Chain D, CHRAC-14 [Drosophila melanogaster] >pdb|2BYM|B Chain B, CHRAC-14 [Drosophila melanogaster] >pdb|2BYM|D Chain D, CHRAC-14 [Drosophila melanogaster] >gb|ACL86411.1| Chrac-14-PA, partial [synthetic construct] >gb|AAL48592.1| RE06926p [Drosophila melanogaster] >gb|AAO41168.1| chromatin accessibility complex 14kD protein [Drosophila melanogaster] >gb|ACL91065.1| Chrac-14-PA [synthetic construct] >gb|ANY27634.1| GEO01605p1 [Drosophila melanogaster]
128 aa protein
accession:NP_476646.2
uncharacterized protein LOC100306382 x] >gb|KAG4988864.1| hypothetical protein JHK85_031847 [Glycine max] >gb|KAG4994464.1| hypothetical protein JHK86_031291 [Glycine max] >gb|KAG5124461.1| hypothetical protein JHK82_031198 [Glycine max] >gb|KAG5145890.1| hypothetical protein JHK84_031433 [Glycine max]
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uncharacterized protein LOC100306382 [Glycine max] >gb|ACU14526.1| unknown [Glycine max] >gb|KAG4988864.1| hypothetical protein JHK85_031847 [Glycine max] >gb|KAG4994464.1| hypothetical protein JHK86_031291 [Glycine max] >gb|KAG5124461.1| hypothetical protein JHK82_031198 [Glycine max] >gb|KAG5145890.1| hypothetical protein JHK84_031433 [Glycine max]
161 aa protein
accession:NP_001237961.1
YB-like 1 Q9.1| RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=DNA polymerase II subunit 3 [Dictyostelium discoideum] >gb|EAL71263.1| YB-like 1 [Dictyostelium discoideum AX4]
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YB-like 1 [Dictyostelium discoideum AX4] >sp|Q75JQ9.1| RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=DNA polymerase II subunit 3 [Dictyostelium discoideum] >gb|EAL71263.1| YB-like 1 [Dictyostelium discoideum AX4]
138 aa protein
accession:XP_645298.1
Query: RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=Arsenic-transactivated protein; Short=AsTP; AltName: Full=Chromatin accessibility complex 17 kDa protein; Short=CHRAC-17; Short=HuCHRAC17; AltName: Full=DNA polymerase II subunit 3; AltName: Full=DNA polymerase epsilon subunit p17
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RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=Arsenic-transactivated protein; Short=AsTP; AltName: Full=Chromatin accessibility complex 17 kDa protein; Short=CHRAC-17; Short=HuCHRAC17; AltName: Full=DNA polymerase II subunit 3; AltName: Full=DNA polymerase epsilon subunit p17
147 aa protein
accession:Q9NRF9.1
DNA polymerase epsilon subunit 3 o rerio]
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DNA polymerase epsilon subunit 3 [Danio rerio] >gb|AAH59666.1| Zgc:73351 [Danio rerio]
148 aa protein
accession:NP_957095.1
DOMAINS: and other(s) domains
...
nuclear factor Y, subunit B3 [Arabidopsis thaliana] >sp|O23310.1| RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; Short=AtNF-YB3; AltName: Full=Transcriptional activator HAP3C [Arabidopsis thaliana] >gb|KAG7547603.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica] >gb|KAG7615966.1| Histone-fold [Arabidopsis thaliana x Arabidopsis arenosa] >gb|AAO39912.1| At4g14540 [Arabidopsis thaliana] >gb|AEE83458.1| nuclear factor Y, subunit B3 [Arabidopsis thaliana] >gb|KAG7620454.1| Transcription factor CBF/NF-Y/archaeal histone domain [Arabidopsis suecica]
161 aa protein
accession:NP_193190.1
chromatin accessibility complex 14kD protein [Drosophila melanogaster] >sp|Q9V444.1| RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=Chromatin accessibility complex 14kD protein; AltName: Full=Histone-fold protein CHRAC subunit [Drosophila melanogaster] >pdb|2BYK|B Chain B, CHRAC-14 [Drosophila melanogaster] >pdb|2BYK|D Chain D, CHRAC-14 [Drosophila melanogaster] >pdb|2BYM|B Chain B, CHRAC-14 [Drosophila melanogaster] >pdb|2BYM|D Chain D, CHRAC-14 [Drosophila melanogaster] >gb|ACL86411.1| Chrac-14-PA, partial [synthetic construct] >gb|AAL48592.1| RE06926p [Drosophila melanogaster] >gb|AAO41168.1| chromatin accessibility complex 14kD protein [Drosophila melanogaster] >gb|ACL91065.1| Chrac-14-PA [synthetic construct] >gb|ANY27634.1| GEO01605p1 [Drosophila melanogaster]
128 aa protein
accession:NP_476646.2
uncharacterized protein LOC100306382 [Glycine max] >gb|ACU14526.1| unknown [Glycine max] >gb|KAG4988864.1| hypothetical protein JHK85_031847 [Glycine max] >gb|KAG4994464.1| hypothetical protein JHK86_031291 [Glycine max] >gb|KAG5124461.1| hypothetical protein JHK82_031198 [Glycine max] >gb|KAG5145890.1| hypothetical protein JHK84_031433 [Glycine max]
161 aa protein
accession:NP_001237961.1
YB-like 1 [Dictyostelium discoideum AX4] >sp|Q75JQ9.1| RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=DNA polymerase II subunit 3 [Dictyostelium discoideum] >gb|EAL71263.1| YB-like 1 [Dictyostelium discoideum AX4]
138 aa protein
accession:XP_645298.1
RecName: Full=DNA polymerase epsilon subunit 3; AltName: Full=Arsenic-transactivated protein; Short=AsTP; AltName: Full=Chromatin accessibility complex 17 kDa protein; Short=CHRAC-17; Short=HuCHRAC17; AltName: Full=DNA polymerase II subunit 3; AltName: Full=DNA polymerase epsilon subunit p17
147 aa protein
accession:Q9NRF9.1
DNA polymerase epsilon subunit 3 [Danio rerio] >gb|AAH59666.1| Zgc:73351 [Danio rerio]
148 aa protein
accession:NP_957095.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 210 | 210 | 83% | 5e-70 | 82.11% | NP_957095.1 | |
2 | 92.4 | 92.4 | 63% | 9e-24 | 54.84% | NP_476646.2 | |
3 | 83.6 | 83.6 | 89% | 8e-20 | 34.29% | NP_001237961.1 | |
4 | 75.5 | 75.5 | 57% | 6e-17 | 41.18% | XP_645298.1 | |
5 | 73.9 | 73.9 | 74% | 4e-16 | 37.61% | NP_193190.1 |