Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_476506.3
collagen alpha-3(VI) chain isoform 3 precursor [Homo sapiens] >gb|KAI2527605.1| collagen type VI alpha 3 chain [Homo sapiens] >gb|KAI4038763.1| collagen type VI alpha 3 chain [Homo sapiens]
...
Query length:
1237 aa
DOMAINS: and other(s) domains
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uncharacterized protein col6a3 isoform X2 tein col6a3 isoform X2 [Danio rerio]
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uncharacterized protein col6a3 isoform X2 [Danio rerio] >ref|XP_021334591.1| uncharacterized protein col6a3 isoform X2 [Danio rerio]
10959 aa protein
accession:XP_017213296.1
collagen alpha-3(VI) chain isoform X2
...
collagen alpha-3(VI) chain isoform X2 [Mus musculus]
3078 aa protein
accession:XP_030101297.1
collagen alpha-3(VI) chain isoform 2 precursor ain [Homo sapiens] >gb|KAI4038762.1| collagen type VI alpha 3 chain [Homo sapiens] >dbj|BAG52467.1| unnamed protein product [Homo sapiens]
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collagen alpha-3(VI) chain isoform 2 precursor [Homo sapiens] >gb|KAI2527604.1| collagen type VI alpha 3 chain [Homo sapiens] >gb|KAI4038762.1| collagen type VI alpha 3 chain [Homo sapiens] >dbj|BAG52467.1| unnamed protein product [Homo sapiens]
1036 aa protein
accession:NP_476505.3
Query: collagen alpha-3(VI) chain isoform 3 precursor ain [Homo sapiens] >gb|KAI4038763.1| collagen type VI alpha 3 chain [Homo sapiens]
...
collagen alpha-3(VI) chain isoform 3 precursor [Homo sapiens] >gb|KAI2527605.1| collagen type VI alpha 3 chain [Homo sapiens] >gb|KAI4038763.1| collagen type VI alpha 3 chain [Homo sapiens]
1237 aa protein
accession:NP_476506.3
collagen alpha-3(VI) chain isoform 5 precursor
...
collagen alpha-3(VI) chain isoform 5 precursor [Homo sapiens]
2971 aa protein
accession:NP_476508.2
collagen alpha-3(VI) chain isoform 1 precursor VI) chain; Flags: Precursor [Homo sapiens] >gb|AAI72233.1| collagen, type VI, alpha 3 [synthetic construct] >gb|ADL14511.1| collagen, type VI, alpha 3 [Homo sapiens] >gb|ADO22347.1| epididymis secretory sperm binding protein [Homo sapiens]
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collagen alpha-3(VI) chain isoform 1 precursor [Homo sapiens] >sp|P12111.5| RecName: Full=Collagen alpha-3(VI) chain; Flags: Precursor [Homo sapiens] >gb|AAI72233.1| collagen, type VI, alpha 3 [synthetic construct] >gb|ADL14511.1| collagen, type VI, alpha 3 [Homo sapiens] >gb|ADO22347.1| epididymis secretory sperm binding protein [Homo sapiens]
3177 aa protein
accession:NP_004360.2
DOMAINS: and other(s) domains
...
uncharacterized protein col6a3 isoform X2 [Danio rerio] >ref|XP_021334591.1| uncharacterized protein col6a3 isoform X2 [Danio rerio]
10959 aa protein
accession:XP_017213296.1
collagen alpha-3(VI) chain isoform X2 [Mus musculus]
3078 aa protein
accession:XP_030101297.1
collagen alpha-3(VI) chain isoform 2 precursor [Homo sapiens] >gb|KAI2527604.1| collagen type VI alpha 3 chain [Homo sapiens] >gb|KAI4038762.1| collagen type VI alpha 3 chain [Homo sapiens] >dbj|BAG52467.1| unnamed protein product [Homo sapiens]
1036 aa protein
accession:NP_476505.3
collagen alpha-3(VI) chain isoform 3 precursor [Homo sapiens] >gb|KAI2527605.1| collagen type VI alpha 3 chain [Homo sapiens] >gb|KAI4038763.1| collagen type VI alpha 3 chain [Homo sapiens]
1237 aa protein
accession:NP_476506.3
collagen alpha-3(VI) chain isoform 5 precursor [Homo sapiens]
2971 aa protein
accession:NP_476508.2
collagen alpha-3(VI) chain isoform 1 precursor [Homo sapiens] >sp|P12111.5| RecName: Full=Collagen alpha-3(VI) chain; Flags: Precursor [Homo sapiens] >gb|AAI72233.1| collagen, type VI, alpha 3 [synthetic construct] >gb|ADL14511.1| collagen, type VI, alpha 3 [Homo sapiens] >gb|ADO22347.1| epididymis secretory sperm binding protein [Homo sapiens]
3177 aa protein
accession:NP_004360.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 2442 | 3822 | 99% | 0.0 | 99.27% | NP_476508.2 | |
2 | 2014 | 3422 | 98% | 0.0 | 82.39% | XP_030101297.1 | |
3 | 856 | 17963 | 97% | 0.0 | 37.87% | XP_017213296.1 | |
4 | 2372 | 4546 | 99% | 0.0 | 99.25% | NP_004360.2 | |
5 | 2011 | 2709 | 100% | 0.0 | 100.00% | NP_476505.3 |