Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
O95477.3
RecName: Full=Phospholipid-transporting ATPase ABCA1; AltName: Full=ATP-binding cassette sub-family A member 1; AltName: Full=ATP-binding cassette transporter 1; Short=ABC-1; Short=ATP-binding cassette 1; AltName: Full=Cholesterol efflux regulatory protein
...
Query length:
2261 aa
DOMAINS: and other(s) domains
...
retinal-specific phospholipid-transporting ATPase ABCA4 isoform 1 orting ATPase ABCA4; AltName: Full=ATP-binding cassette sub-family A member 4; AltName: Full=RIM ABC transporter; Short=RIM proteinv; Short=RmP; AltName: Full=Retinal-specific ATP-binding cassette transporter; AltName: Full=Stargardt disease protein [Homo sapiens] >pdb|7LKP|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|7M1P|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|7M1Q|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|8F5B|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >gb|AAI72262.1| ATP-binding cassette, sub-family A (ABC1), member 4, partial [synthetic construct] >gb|AAI72565.1| ATP-binding cassette, sub-family A (ABC1), member 4 [synthetic construct] >gb|EAW73056.1| ATP-binding cassette, sub-family A (ABC1), member 4, isoform CRA_a [Homo sapiens]
...
retinal-specific phospholipid-transporting ATPase ABCA4 isoform 1 [Homo sapiens] >sp|P78363.3| RecName: Full=Retinal-specific phospholipid-transporting ATPase ABCA4; AltName: Full=ATP-binding cassette sub-family A member 4; AltName: Full=RIM ABC transporter; Short=RIM proteinv; Short=RmP; AltName: Full=Retinal-specific ATP-binding cassette transporter; AltName: Full=Stargardt disease protein [Homo sapiens] >pdb|7LKP|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|7M1P|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|7M1Q|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|8F5B|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >gb|AAI72262.1| ATP-binding cassette, sub-family A (ABC1), member 4, partial [synthetic construct] >gb|AAI72565.1| ATP-binding cassette, sub-family A (ABC1), member 4 [synthetic construct] >gb|EAW73056.1| ATP-binding cassette, sub-family A (ABC1), member 4, isoform CRA_a [Homo sapiens]
2273 aa protein
accession:NP_000341.2
phospholipid-transporting ATPase ABCA1a
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phospholipid-transporting ATPase ABCA1a [Danio rerio]
2268 aa protein
accession:NP_001296394.1
Query: RecName: Full=Phospholipid-transporting ATPase ABCA1; AltName: Full=ATP-binding cassette sub-family A member 1; AltName: Full=ATP-binding cassette transporter 1; Short=ABC-1; Short=ATP-binding cassette 1; AltName: Full=Cholesterol efflux regulatory protein
...
RecName: Full=Phospholipid-transporting ATPase ABCA1; AltName: Full=ATP-binding cassette sub-family A member 1; AltName: Full=ATP-binding cassette transporter 1; Short=ABC-1; Short=ATP-binding cassette 1; AltName: Full=Cholesterol efflux regulatory protein
2261 aa protein
accession:O95477.3
phospholipid-transporting ATPase ABCA1 pid-transporting ATPase ABCA1; AltName: Full=ATP-binding cassette sub-family A member 1; AltName: Full=ATP-binding cassette transporter 1; Short=ABC-1; Short=ATP-binding cassette 1 [Mus musculus] >gb|AAI56411.1| ATP-binding cassette, sub-family A (ABC1), member 1, partial [synthetic construct] >gb|AAI72713.1| ATP-binding cassette, sub-family A (ABC1), member 1 [synthetic construct] >gb|EDL02285.1| ATP-binding cassette, sub-family A (ABC1), member 1, isoform CRA_a [Mus musculus]
...
phospholipid-transporting ATPase ABCA1 [Mus musculus] >sp|P41233.4| RecName: Full=Phospholipid-transporting ATPase ABCA1; AltName: Full=ATP-binding cassette sub-family A member 1; AltName: Full=ATP-binding cassette transporter 1; Short=ABC-1; Short=ATP-binding cassette 1 [Mus musculus] >gb|AAI56411.1| ATP-binding cassette, sub-family A (ABC1), member 1, partial [synthetic construct] >gb|AAI72713.1| ATP-binding cassette, sub-family A (ABC1), member 1 [synthetic construct] >gb|EDL02285.1| ATP-binding cassette, sub-family A (ABC1), member 1, isoform CRA_a [Mus musculus]
2261 aa protein
accession:NP_038482.3
phospholipid-transporting ATPase ABCA1 isoform X1
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phospholipid-transporting ATPase ABCA1 isoform X1 [Mus musculus]
2263 aa protein
accession:XP_006537617.1
phospholipid-transporting ATPase ABCA1 isoform X2
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phospholipid-transporting ATPase ABCA1 isoform X2 [Mus musculus]
2238 aa protein
accession:XP_006537619.1
DOMAINS: and other(s) domains
...
retinal-specific phospholipid-transporting ATPase ABCA4 isoform 1 [Homo sapiens] >sp|P78363.3| RecName: Full=Retinal-specific phospholipid-transporting ATPase ABCA4; AltName: Full=ATP-binding cassette sub-family A member 4; AltName: Full=RIM ABC transporter; Short=RIM proteinv; Short=RmP; AltName: Full=Retinal-specific ATP-binding cassette transporter; AltName: Full=Stargardt disease protein [Homo sapiens] >pdb|7LKP|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|7M1P|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|7M1Q|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >pdb|8F5B|A Chain A, Retinal-specific phospholipid-transporting ATPase ABCA4 [Homo sapiens] >gb|AAI72262.1| ATP-binding cassette, sub-family A (ABC1), member 4, partial [synthetic construct] >gb|AAI72565.1| ATP-binding cassette, sub-family A (ABC1), member 4 [synthetic construct] >gb|EAW73056.1| ATP-binding cassette, sub-family A (ABC1), member 4, isoform CRA_a [Homo sapiens]
2273 aa protein
accession:NP_000341.2
phospholipid-transporting ATPase ABCA1a [Danio rerio]
2268 aa protein
accession:NP_001296394.1
RecName: Full=Phospholipid-transporting ATPase ABCA1; AltName: Full=ATP-binding cassette sub-family A member 1; AltName: Full=ATP-binding cassette transporter 1; Short=ABC-1; Short=ATP-binding cassette 1; AltName: Full=Cholesterol efflux regulatory protein
2261 aa protein
accession:O95477.3
phospholipid-transporting ATPase ABCA1 [Mus musculus] >sp|P41233.4| RecName: Full=Phospholipid-transporting ATPase ABCA1; AltName: Full=ATP-binding cassette sub-family A member 1; AltName: Full=ATP-binding cassette transporter 1; Short=ABC-1; Short=ATP-binding cassette 1 [Mus musculus] >gb|AAI56411.1| ATP-binding cassette, sub-family A (ABC1), member 1, partial [synthetic construct] >gb|AAI72713.1| ATP-binding cassette, sub-family A (ABC1), member 1 [synthetic construct] >gb|EDL02285.1| ATP-binding cassette, sub-family A (ABC1), member 1, isoform CRA_a [Mus musculus]
2261 aa protein
accession:NP_038482.3
phospholipid-transporting ATPase ABCA1 isoform X1 [Mus musculus]
2263 aa protein
accession:XP_006537617.1
phospholipid-transporting ATPase ABCA1 isoform X2 [Mus musculus]
2238 aa protein
accession:XP_006537619.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 4399 | 4399 | 100% | 0.0 | 95.31% | NP_038482.3 | |
| 2 | 3461 | 3461 | 100% | 0.0 | 74.36% | NP_001296394.1 | |
| 3 | 2261 | 2261 | 98% | 0.0 | 50.64% | NP_000341.2 | |
| 4 | 4343 | 4343 | 100% | 0.0 | 94.34% | XP_006537617.1 | |
| 5 | 4284 | 4284 | 100% | 0.0 | 93.33% | XP_006537619.1 |