Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_012422.2 gag protein [Saccharomyces cerevisiae S288C] >gb|KAF1905770.1| gag protein, partial [Saccharomyces cerevisiae] >gb|KAG2514783.1| gag protein [Saccharomyces cerevisiae] >tpg|DAA08687.2| TPA: gag protein [Saccharomyces cerevisiae S288C] ... Query length: 226 aa
gag protein .1| RecName: Full=Transposon Ty4-H Gag polyprotein; Short=TY4A; Short=Transposon Ty4 protein A [Saccharomyces cerevisiae S288C] >gb|AAS56165.1| YHL009W-A [Saccharomyces cerevisiae] >gb|EIW10134.1| hypothetical protein CENPK1137D_5379 [Saccharomyces cerevisiae CEN.PK113-7D] >gb|QHB12200.1| hypothetical protein SCEN_P02420 [Saccharomyces cerevisiae] >tpg|DAA06679.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q6Q5P6.1| RecName: Full=Transposon Ty4-H Gag polyprotein; Short=TY4A; Short=Transposon Ty4 protein A [Saccharomyces cerevisiae S288C] >gb|AAS56165.1| YHL009W-A [Saccharomyces cerevisiae] >gb|EIW10134.1| hypothetical protein CENPK1137D_5379 [Saccharomyces cerevisiae CEN.PK113-7D] >gb|QHB12200.1| hypothetical protein SCEN_P02420 [Saccharomyces cerevisiae] >tpg|DAA06679.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
413 aa protein
accession:NP_058134.1
Query: gag protein 5770.1| gag protein, partial [Saccharomyces cerevisiae] >gb|KAG2514783.1| gag protein [Saccharomyces cerevisiae] >tpg|DAA08687.2| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >gb|KAF1905770.1| gag protein, partial [Saccharomyces cerevisiae] >gb|KAG2514783.1| gag protein [Saccharomyces cerevisiae] >tpg|DAA08687.2| TPA: gag protein [Saccharomyces cerevisiae S288C]
226 aa protein
accession:NP_012422.2
gag-pol fusion protein gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >tpg|DAA64692.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1802 aa protein
accession:NP_001291944.1
gag-pol fusion protein : Full=Transposon Ty4-H Gag-Pol polyprotein; AltName: Full=TY4A-TY4B; AltName: Full=Transposon Ty4 TYA-TYB polyprotein; Includes: RecName: Full=Capsid protein; Short=CA; Includes: RecName: Full=Ty4 protease; Short=PR; Includes: RecName: Full=Integrase; Short=IN; Includes: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH [Saccharomyces cerevisiae S288C] >tpg|DAA06678.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|P0C2J7.1| RecName: Full=Transposon Ty4-H Gag-Pol polyprotein; AltName: Full=TY4A-TY4B; AltName: Full=Transposon Ty4 TYA-TYB polyprotein; Includes: RecName: Full=Capsid protein; Short=CA; Includes: RecName: Full=Ty4 protease; Short=PR; Includes: RecName: Full=Integrase; Short=IN; Includes: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH [Saccharomyces cerevisiae S288C] >tpg|DAA06678.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1802 aa protein
accession:NP_058133.1

Descriptions

Best hits

Select:AllNone Selected:0
Alignments Download
GenPept Show/hide columns of the table presenting best hits
Available columns







Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
gag protein [Saccharomyces cerevisiae S288C] >sp|Q6Q5P6.1| RecName: Full=Transposon Ty4-H Gag polyprotein; Short=TY4A; Short=Transposon Ty4 protein A [Saccharomyces cerevisiae S288C] >gb|AAS56165.1| YHL009W-A [Saccharomyces cerevisiae] >gb|EIW10134.1| hypothetical protein CENPK1137D_5379 [Saccharomyces cerevisiae CEN.PK113-7D] >gb|QHB12200.1| hypothetical protein SCEN_P02420 [Saccharomyces cerevisiae] >tpg|DAA06679.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
443 443 98% 8e-15798.65% NP_058134.1
2
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >tpg|DAA64692.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
444 444 98% 5e-14498.65% NP_001291944.1
3
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|P0C2J7.1| RecName: Full=Transposon Ty4-H Gag-Pol polyprotein; AltName: Full=TY4A-TY4B; AltName: Full=Transposon Ty4 TYA-TYB polyprotein; Includes: RecName: Full=Capsid protein; Short=CA; Includes: RecName: Full=Ty4 protease; Short=PR; Includes: RecName: Full=Integrase; Short=IN; Includes: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH [Saccharomyces cerevisiae S288C] >tpg|DAA06678.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
444 444 98% 6e-14498.65% NP_058133.1