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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P0CX59.1 RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 ... Query length: 440 aa
gag-pol fusion protein : Full=Transposon Ty1-BR Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA84952.1| TY1B [Saccharomyces cerevisiae] >emb|CAA84954.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA07133.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q12193.1| RecName: Full=Transposon Ty1-BR Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA84952.1| TY1B [Saccharomyces cerevisiae] >emb|CAA84954.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA07133.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1756 aa protein
accession:NP_009567.1
gag protein .1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q12217.1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_009568.1
gag protein 8151.1| gag protein 8156.1| gag protein 8166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae] ...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058151.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058156.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae]
440 aa protein
accession:NP_013766.1
Query: RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 ...
RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4
440 aa protein
accession:P0CX59.1
gag-pol fusion protein : Full=Transposon Ty1-PR2 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >tpg|DAA11571.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|P0C2J0.1| RecName: Full=Transposon Ty1-PR2 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >tpg|DAA11571.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1756 aa protein
accession:NP_058193.1
gag-pol fusion protein : Full=Transposon Ty1-OR Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA64060.1| YOR3367w [Saccharomyces cerevisiae] >emb|CAA99343.1| TY1B [Saccharomyces cerevisiae] >emb|CAA99345.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA10915.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q92393.1| RecName: Full=Transposon Ty1-OR Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA64060.1| YOR3367w [Saccharomyces cerevisiae] >emb|CAA99343.1| TY1B [Saccharomyces cerevisiae] >emb|CAA99345.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA10915.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1755 aa protein
accession:NP_058183.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
gag protein [Saccharomyces cerevisiae S288C] >sp|Q12217.1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
907 907 100% 0.099.77% NP_009568.1
2
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058151.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058156.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae]
905 905 100% 0.099.77% NP_013766.1
3
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|P0C2J0.1| RecName: Full=Transposon Ty1-PR2 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >tpg|DAA11571.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
903 903 98% 0.0100.00% NP_058193.1
4
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q92393.1| RecName: Full=Transposon Ty1-OR Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA64060.1| YOR3367w [Saccharomyces cerevisiae] >emb|CAA99343.1| TY1B [Saccharomyces cerevisiae] >emb|CAA99345.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA10915.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
902 902 98% 0.0100.00% NP_058183.1
5
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q12193.1| RecName: Full=Transposon Ty1-BR Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA84952.1| TY1B [Saccharomyces cerevisiae] >emb|CAA84954.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA07133.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
902 902 98% 0.099.77% NP_009567.1