Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001238936.1
poly(A) polymerase alpha isoform 3 [Homo sapiens] >gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens] >gb|KAI2572709.1| poly(A) polymerase alpha [Homo sapiens] >gb|KAI4062335.1| poly(A) polymerase alpha [Homo sapiens] >emb|CAD61935.1| unnamed protein product [Homo sapiens]
...
Query length:
238 aa
DOMAINS: and other(s) domains
...
Poly(A) polymerase Poly(A) polymerase [Caenorhabditis elegans]
...
Poly(A) polymerase [Caenorhabditis elegans] >emb|CAA16309.3| Poly(A) polymerase [Caenorhabditis elegans]
655 aa protein
accession:NP_001379022.1
hiiragi, isoform C hiiragi, isoform A [Drosophila melanogaster] >ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster] >gb|ACL83802.1| hrg-PA, partial [synthetic construct] >gb|AAF36978.1| poly A polymerase [Drosophila melanogaster] >gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster] >gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster] >gb|AAN71296.1| RE09914p [Drosophila melanogaster]
...
hiiragi, isoform C [Drosophila melanogaster] >ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster] >ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster] >gb|ACL83802.1| hrg-PA, partial [synthetic construct] >gb|AAF36978.1| poly A polymerase [Drosophila melanogaster] >gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster] >gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster] >gb|AAN71296.1| RE09914p [Drosophila melanogaster]
659 aa protein
accession:NP_001036562.1
poly(A) polymerase alpha isoform 2 synthetic construct] >gb|PNI97411.1| PAPOLA isoform 17 [Pan troglodytes] >gb|PNJ33831.1| PAPOLA isoform 18 [Pongo abelii] >emb|SJX33117.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH00927.1| PAPOLA protein [Homo sapiens]
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poly(A) polymerase alpha isoform 2 [Homo sapiens] >gb|AIC59699.1| PAPOLA, partial [synthetic construct] >gb|PNI97411.1| PAPOLA isoform 17 [Pan troglodytes] >gb|PNJ33831.1| PAPOLA isoform 18 [Pongo abelii] >emb|SJX33117.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH00927.1| PAPOLA protein [Homo sapiens]
285 aa protein
accession:NP_001238935.1
poly(A) polymerase alpha isoform X2
...
poly(A) polymerase alpha isoform X2 [Danio rerio]
704 aa protein
accession:XP_009292816.1
Query: poly(A) polymerase alpha isoform 3 e alpha, isoform CRA_e [Homo sapiens] >gb|KAI2572709.1| poly(A) polymerase alpha [Homo sapiens] >gb|KAI4062335.1| poly(A) polymerase alpha [Homo sapiens] >emb|CAD61935.1| unnamed protein product [Homo sapiens]
...
poly(A) polymerase alpha isoform 3 [Homo sapiens] >gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens] >gb|KAI2572709.1| poly(A) polymerase alpha [Homo sapiens] >gb|KAI4062335.1| poly(A) polymerase alpha [Homo sapiens] >emb|CAD61935.1| unnamed protein product [Homo sapiens]
238 aa protein
accession:NP_001238936.1
poly(A) polymerase alpha isoform X7 erase alpha isoform X4 [Mus pahari]
...
poly(A) polymerase alpha isoform X7 [Mus musculus] >ref|XP_029397023.1| poly(A) polymerase alpha isoform X4 [Mus pahari]
717 aa protein
accession:XP_017170483.1
DOMAINS: and other(s) domains
...
Poly(A) polymerase [Caenorhabditis elegans] >emb|CAA16309.3| Poly(A) polymerase [Caenorhabditis elegans]
655 aa protein
accession:NP_001379022.1
hiiragi, isoform C [Drosophila melanogaster] >ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster] >ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster] >gb|ACL83802.1| hrg-PA, partial [synthetic construct] >gb|AAF36978.1| poly A polymerase [Drosophila melanogaster] >gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster] >gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster] >gb|AAN71296.1| RE09914p [Drosophila melanogaster]
659 aa protein
accession:NP_001036562.1
poly(A) polymerase alpha isoform 2 [Homo sapiens] >gb|AIC59699.1| PAPOLA, partial [synthetic construct] >gb|PNI97411.1| PAPOLA isoform 17 [Pan troglodytes] >gb|PNJ33831.1| PAPOLA isoform 18 [Pongo abelii] >emb|SJX33117.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH00927.1| PAPOLA protein [Homo sapiens]
285 aa protein
accession:NP_001238935.1
poly(A) polymerase alpha isoform X2 [Danio rerio]
704 aa protein
accession:XP_009292816.1
poly(A) polymerase alpha isoform 3 [Homo sapiens] >gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens] >gb|KAI2572709.1| poly(A) polymerase alpha [Homo sapiens] >gb|KAI4062335.1| poly(A) polymerase alpha [Homo sapiens] >emb|CAD61935.1| unnamed protein product [Homo sapiens]
238 aa protein
accession:NP_001238936.1
poly(A) polymerase alpha isoform X7 [Mus musculus] >ref|XP_029397023.1| poly(A) polymerase alpha isoform X4 [Mus pahari]
717 aa protein
accession:XP_017170483.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 417 | 417 | 86% | 2e-148 | 99.51% | NP_001238935.1 | |
2 | 423 | 423 | 86% | 1e-144 | 98.54% | XP_017170483.1 | |
3 | 356 | 356 | 93% | 2e-118 | 78.83% | XP_009292816.1 | |
4 | 260 | 260 | 80% | 1e-81 | 63.35% | NP_001036562.1 | |
5 | 217 | 217 | 77% | 3e-65 | 56.22% | NP_001379022.1 |