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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_036195.3 gag protein [Saccharomyces cerevisiae S288C] >sp|P0C2I4.1| RecName: Full=Transposon Ty1-H Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA06911.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ... Query length: 478 aa
gag-pol fusion protein : Full=Transposon Ty1-H Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB69744.1| Yhr214c-bp [Saccharomyces cerevisiae] >tpg|DAA06910.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|O13535.1| RecName: Full=Transposon Ty1-H Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB69744.1| Yhr214c-bp [Saccharomyces cerevisiae] >tpg|DAA06910.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1793 aa protein
accession:NP_012086.1
Query: gag protein .1| RecName: Full=Transposon Ty1-H Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA06911.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|P0C2I4.1| RecName: Full=Transposon Ty1-H Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA06911.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
478 aa protein
accession:NP_036195.3
gag protein 8151.1| gag protein 8156.1| gag protein 8166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae] ...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058151.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058156.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae]
440 aa protein
accession:NP_013766.1
gag protein 8194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058184.3
gag protein .1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q12217.1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_009568.1
gag protein .1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q03856.1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058141.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
983 983 98% 0.0100.00% NP_012086.1
2
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058151.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058156.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae]
884 884 100% 0.091.84% NP_013766.1
3
880 880 100% 0.091.63% NP_058141.1
4
880 880 100% 0.091.63% NP_058184.3
5
880 880 100% 0.091.42% NP_009568.1