Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_036195.3
gag protein [Saccharomyces cerevisiae S288C] >sp|P0C2I4.1| RecName: Full=Transposon Ty1-H Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA06911.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
...
Query length:
478 aa
DOMAINS: and other(s) domains
...
gag-pol fusion protein : Full=Transposon Ty1-H Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB69744.1| Yhr214c-bp [Saccharomyces cerevisiae] >tpg|DAA06910.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|O13535.1| RecName: Full=Transposon Ty1-H Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB69744.1| Yhr214c-bp [Saccharomyces cerevisiae] >tpg|DAA06910.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1793 aa protein
accession:NP_012086.1
Query: gag protein .1| RecName: Full=Transposon Ty1-H Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA06911.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
...
gag protein [Saccharomyces cerevisiae S288C] >sp|P0C2I4.1| RecName: Full=Transposon Ty1-H Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA06911.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
478 aa protein
accession:NP_036195.3
gag protein 8151.1| gag protein 8156.1| gag protein 8166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae]
...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058151.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058156.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae]
440 aa protein
accession:NP_013766.1
gag protein 8194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058184.3
gag protein .1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q12217.1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_009568.1
gag protein .1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q03856.1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058141.1
DOMAINS: and other(s) domains
...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|O13535.1| RecName: Full=Transposon Ty1-H Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB69744.1| Yhr214c-bp [Saccharomyces cerevisiae] >tpg|DAA06910.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1793 aa protein
accession:NP_012086.1
gag protein [Saccharomyces cerevisiae S288C] >sp|P0C2I4.1| RecName: Full=Transposon Ty1-H Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA06911.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
478 aa protein
accession:NP_036195.3
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058151.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058156.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058166.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX65.1| RecName: Full=Transposon Ty1-DR5 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX66.1| RecName: Full=Transposon Ty1-ER2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX67.1| RecName: Full=Transposon Ty1-GR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX68.1| RecName: Full=Transposon Ty1-LR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX69.1| RecName: Full=Transposon Ty1-MR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|AAS56168.1| YGR161C-C [Saccharomyces cerevisiae] >gb|EDN60380.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|EGA60066.1| YGR161C-C-like protein [Saccharomyces cerevisiae FostersO] >gb|EDN64511.1| conserved protein [Saccharomyces cerevisiae YJM789] >gb|KAF4002601.1| TYA transposon family protein [Saccharomyces cerevisiae]
440 aa protein
accession:NP_013766.1
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058184.3
gag protein [Saccharomyces cerevisiae S288C] >sp|Q12217.1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_009568.1
gag protein [Saccharomyces cerevisiae S288C] >sp|Q03856.1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058141.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 983 | 983 | 98% | 0.0 | 100.00% | NP_012086.1 | |
2 | 884 | 884 | 100% | 0.0 | 91.84% | NP_013766.1 | |
3 | 880 | 880 | 100% | 0.0 | 91.63% | NP_058141.1 | |
4 | 880 | 880 | 100% | 0.0 | 91.63% | NP_058184.3 | |
5 | 880 | 880 | 100% | 0.0 | 91.42% | NP_009568.1 |