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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_058153.3 gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058155.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058170.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058190.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX70.1| RecName: Full=Transposon Ty1-DR6 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX71.1| RecName: Full=Transposon Ty1-ER1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX72.1| RecName: Full=Transposon Ty1-LR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX73.1| RecName: Full=Transposon Ty1-PL Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|ADB23359.1| retrotransposon TYA transposon protein [Saccharomyces cerevisiae] >emb|CAA97983.1| TY1A [Saccharomyces cerevisiae] >emb|CAA97987.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07798.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA09475.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ... Query length: 440 aa
gag-pol fusion protein : Full=Transposon Ty1-PL Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA97984.1| TY1B [Saccharomyces cerevisiae] >emb|CAA97988.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA11178.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q12414.1| RecName: Full=Transposon Ty1-PL Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA97984.1| TY1B [Saccharomyces cerevisiae] >emb|CAA97988.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA11178.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1755 aa protein
accession:NP_058189.1
gag protein .1| RecName: Full=Transposon Ty1-DR4 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA98915.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA12105.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|O74302.1| RecName: Full=Transposon Ty1-DR4 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA98915.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA12105.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058149.1
Query: gag protein 8155.1| gag protein 8170.1| gag protein 8190.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX70.1| RecName: Full=Transposon Ty1-DR6 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX71.1| RecName: Full=Transposon Ty1-ER1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX72.1| RecName: Full=Transposon Ty1-LR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX73.1| RecName: Full=Transposon Ty1-PL Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|ADB23359.1| retrotransposon TYA transposon protein [Saccharomyces cerevisiae] >emb|CAA97983.1| TY1A [Saccharomyces cerevisiae] >emb|CAA97987.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07798.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA09475.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058155.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058170.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058190.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX70.1| RecName: Full=Transposon Ty1-DR6 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX71.1| RecName: Full=Transposon Ty1-ER1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX72.1| RecName: Full=Transposon Ty1-LR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX73.1| RecName: Full=Transposon Ty1-PL Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|ADB23359.1| retrotransposon TYA transposon protein [Saccharomyces cerevisiae] >emb|CAA97983.1| TY1A [Saccharomyces cerevisiae] >emb|CAA97987.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07798.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA09475.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058153.3
gag protein 3673.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058172.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX74.1| RecName: Full=Transposon Ty1-JR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX75.1| RecName: Full=Transposon Ty1-LR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX76.1| RecName: Full=Transposon Ty1-ML2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|QHB09644.1| hypothetical protein SCEN_J02380 [Saccharomyces cerevisiae] >emb|CAA60721.1| Ty1A [Saccharomyces cerevisiae] >emb|CAA88329.1| unnamed protein product [Saccharomyces cerevisiae] >emb|CAA89552.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA08816.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_013673.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058172.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX74.1| RecName: Full=Transposon Ty1-JR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX75.1| RecName: Full=Transposon Ty1-LR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX76.1| RecName: Full=Transposon Ty1-ML2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|QHB09644.1| hypothetical protein SCEN_J02380 [Saccharomyces cerevisiae] >emb|CAA60721.1| Ty1A [Saccharomyces cerevisiae] >emb|CAA88329.1| unnamed protein product [Saccharomyces cerevisiae] >emb|CAA89552.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA08816.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_012561.3
gag protein .1| RecName: Full=Transposon Ty1-LR4 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|KAF1904815.1| gag protein, partial [Saccharomyces cerevisiae] >gb|KAG2513903.1| gag protein [Saccharomyces cerevisiae] >tpg|DAA09569.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|P0C2I8.1| RecName: Full=Transposon Ty1-LR4 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|KAF1904815.1| gag protein, partial [Saccharomyces cerevisiae] >gb|KAG2513903.1| gag protein [Saccharomyces cerevisiae] >tpg|DAA09569.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058173.1
gag protein .2| RecName: Full=Transposon Ty1-PR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA11574.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q6Q5H1.2| RecName: Full=Transposon Ty1-PR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA11574.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058196.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_013673.1| gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058172.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX74.1| RecName: Full=Transposon Ty1-JR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX75.1| RecName: Full=Transposon Ty1-LR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX76.1| RecName: Full=Transposon Ty1-ML2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|QHB09644.1| hypothetical protein SCEN_J02380 [Saccharomyces cerevisiae] >emb|CAA60721.1| Ty1A [Saccharomyces cerevisiae] >emb|CAA88329.1| unnamed protein product [Saccharomyces cerevisiae] >emb|CAA89552.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA08816.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
907 907 100% 0.099.77% NP_012561.3
2
gag protein [Saccharomyces cerevisiae S288C] >sp|Q6Q5H1.2| RecName: Full=Transposon Ty1-PR3 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >tpg|DAA11574.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
906 906 100% 0.099.55% NP_058196.1
3
gag protein [Saccharomyces cerevisiae S288C] >sp|P0C2I8.1| RecName: Full=Transposon Ty1-LR4 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >gb|KAF1904815.1| gag protein, partial [Saccharomyces cerevisiae] >gb|KAG2513903.1| gag protein [Saccharomyces cerevisiae] >tpg|DAA09569.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
905 905 100% 0.099.55% NP_058173.1
4
gag protein [Saccharomyces cerevisiae S288C] >sp|O74302.1| RecName: Full=Transposon Ty1-DR4 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA98915.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA12105.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
904 904 100% 0.099.55% NP_058149.1
5
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q12414.1| RecName: Full=Transposon Ty1-PL Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >emb|CAA97984.1| TY1B [Saccharomyces cerevisiae] >emb|CAA97988.1| TY1B [Saccharomyces cerevisiae] >tpg|DAA11178.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
904 904 98% 0.0100.00% NP_058189.1