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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: JAA44153.1 CCCTC-binding factor (zinc finger protein) [Pan troglodytes] ... Query length: 727 aa
CTCF |ACL86092.1| CTCF-PA, partial [synthetic construct] >gb|AAF50573.2| CTCF |AAK92918.1| GH14774p |ACL92681.1| CTCF-PA [synthetic construct] >gb|AOQ04528.1| CTCF-RA, partial [synthetic construct] ...
CTCF [Drosophila melanogaster] >gb|ACL86092.1| CTCF-PA, partial [synthetic construct] >gb|AAF50573.2| CTCF [Drosophila melanogaster] >gb|AAK92918.1| GH14774p [Drosophila melanogaster] >gb|ACL92681.1| CTCF-PA [synthetic construct] >gb|AOQ04528.1| CTCF-RA, partial [synthetic construct]
818 aa protein
accession:NP_648109.1
transcriptional repressor CTCF factor (zinc finger protein) [Danio rerio] >gb|AAI63935.1| CCCTC-binding factor (zinc finger protein) [Danio rerio] >gb|AAT11782.1| CCCTC-binding factor [Danio rerio] ...
transcriptional repressor CTCF [Danio rerio] >gb|AAI63931.1| CCCTC-binding factor (zinc finger protein) [Danio rerio] >gb|AAI63935.1| CCCTC-binding factor (zinc finger protein) [Danio rerio] >gb|AAT11782.1| CCCTC-binding factor [Danio rerio]
798 aa protein
accession:NP_001001844.1
transcriptional repressor CTCF isoform 3 pressor CTCF isoform X2 [Homo sapiens] >ref|XP_030651179.1| transcriptional repressor CTCF isoform X2 [Nomascus leucogenys] >ref|XP_034796339.1| transcriptional repressor CTCF isoform X2 [Pan paniscus] >ref|XP_054235374.1| transcriptional repressor CTCF isoform X2 [Homo sapiens] >ref|XP_054309931.1| transcriptional repressor CTCF isoform X2 [Pongo pygmaeus] >ref|XP_054390947.1| transcriptional repressor CTCF isoform X2 [Pongo abelii] >ref|XP_054525406.1| transcriptional repressor CTCF isoform X2 [Pan troglodytes] >ref|XP_055089400.1| transcriptional repressor CTCF isoform X2 [Symphalangus syndactylus] >ref|XP_063467821.1| transcriptional repressor CTCF isoform X2 [Symphalangus syndactylus] >ref|XP_063653329.1| transcriptional repressor CTCF isoform X2 [Pan troglodytes] >gb|KAI2579178.1| CCCTC-binding factor [Homo sapiens] >gb|KAI2579179.1| CCCTC-binding factor [Homo sapiens] >gb|KAI4055569.1| CCCTC-binding factor [Homo sapiens] >gb|KAI4055573.1| CCCTC-binding factor [Homo sapiens] ...
transcriptional repressor CTCF isoform 3 [Homo sapiens] >ref|XP_005255832.1| transcriptional repressor CTCF isoform X2 [Homo sapiens] >ref|XP_030651179.1| transcriptional repressor CTCF isoform X2 [Nomascus leucogenys] >ref|XP_034796339.1| transcriptional repressor CTCF isoform X2 [Pan paniscus] >ref|XP_054235374.1| transcriptional repressor CTCF isoform X2 [Homo sapiens] >ref|XP_054309931.1| transcriptional repressor CTCF isoform X2 [Pongo pygmaeus] >ref|XP_054390947.1| transcriptional repressor CTCF isoform X2 [Pongo abelii] >ref|XP_054525406.1| transcriptional repressor CTCF isoform X2 [Pan troglodytes] >ref|XP_055089400.1| transcriptional repressor CTCF isoform X2 [Symphalangus syndactylus] >ref|XP_063467821.1| transcriptional repressor CTCF isoform X2 [Symphalangus syndactylus] >ref|XP_063653329.1| transcriptional repressor CTCF isoform X2 [Pan troglodytes] >gb|KAI2579178.1| CCCTC-binding factor [Homo sapiens] >gb|KAI2579179.1| CCCTC-binding factor [Homo sapiens] >gb|KAI4055569.1| CCCTC-binding factor [Homo sapiens] >gb|KAI4055573.1| CCCTC-binding factor [Homo sapiens]
725 aa protein
accession:NP_001350845.1
Query: CCCTC-binding factor (zinc finger protein) ...
CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
727 aa protein
accession:JAA44153.1
transcriptional repressor CTCF isoform 2 pressor CTCF isoform 2 [Mus musculus] >ref|NP_001390656.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|NP_001390657.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|XP_021075675.1| transcriptional repressor CTCF isoform X2 [Mus pahari] ...
transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|NP_001390655.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|NP_001390656.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|NP_001390657.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|XP_021075675.1| transcriptional repressor CTCF isoform X2 [Mus pahari]
735 aa protein
accession:NP_001345853.1
transcriptional repressor CTCF isoform 1 pressor CTCF isoform 1 [Mus musculus] >ref|NP_001390654.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|NP_851839.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|XP_021075674.1| transcriptional repressor CTCF isoform X1 [Mus pahari] >ref|XP_029388279.1| transcriptional repressor CTCF isoform X1 [Mus pahari] >ref|XP_030099143.1| transcriptional repressor CTCF isoform X5 [Mus musculus] >ref|XP_036009639.1| transcriptional repressor CTCF isoform X5 [Mus musculus] >sp|Q61164.2| RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc finger protein; AltName: Full=CCCTC-binding factor; AltName: Full=CTCFL paralog [Mus musculus] >gb|AAH46398.1| CCCTC-binding factor [Mus musculus] >gb|AAH49131.1| CCCTC-binding factor [Mus musculus] >gb|AAH58240.1| CCCTC-binding factor [Mus musculus] >gb|EDL11292.1| CCCTC-binding factor, isoform CRA_a [Mus musculus] >gb|EDL11293.1| CCCTC-binding factor, isoform CRA_a [Mus musculus] ...
transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|NP_001390653.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|NP_001390654.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|NP_851839.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|XP_021075674.1| transcriptional repressor CTCF isoform X1 [Mus pahari] >ref|XP_029388279.1| transcriptional repressor CTCF isoform X1 [Mus pahari] >ref|XP_030099143.1| transcriptional repressor CTCF isoform X5 [Mus musculus] >ref|XP_036009639.1| transcriptional repressor CTCF isoform X5 [Mus musculus] >sp|Q61164.2| RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc finger protein; AltName: Full=CCCTC-binding factor; AltName: Full=CTCFL paralog [Mus musculus] >gb|AAH46398.1| CCCTC-binding factor [Mus musculus] >gb|AAH49131.1| CCCTC-binding factor [Mus musculus] >gb|AAH58240.1| CCCTC-binding factor [Mus musculus] >gb|EDL11292.1| CCCTC-binding factor, isoform CRA_a [Mus musculus] >gb|EDL11293.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
736 aa protein
accession:NP_001390652.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
transcriptional repressor CTCF isoform 3 [Homo sapiens] >ref|XP_005255832.1| transcriptional repressor CTCF isoform X2 [Homo sapiens] >ref|XP_030651179.1| transcriptional repressor CTCF isoform X2 [Nomascus leucogenys] >ref|XP_034796339.1| transcriptional repressor CTCF isoform X2 [Pan paniscus] >ref|XP_054235374.1| transcriptional repressor CTCF isoform X2 [Homo sapiens] >ref|XP_054309931.1| transcriptional repressor CTCF isoform X2 [Pongo pygmaeus] >ref|XP_054390947.1| transcriptional repressor CTCF isoform X2 [Pongo abelii] >ref|XP_054525406.1| transcriptional repressor CTCF isoform X2 [Pan troglodytes] >ref|XP_055089400.1| transcriptional repressor CTCF isoform X2 [Symphalangus syndactylus] >ref|XP_063467821.1| transcriptional repressor CTCF isoform X2 [Symphalangus syndactylus] >ref|XP_063653329.1| transcriptional repressor CTCF isoform X2 [Pan troglodytes] >gb|KAI2579178.1| CCCTC-binding factor [Homo sapiens] >gb|KAI2579179.1| CCCTC-binding factor [Homo sapiens] >gb|KAI4055569.1| CCCTC-binding factor [Homo sapiens] >gb|KAI4055573.1| CCCTC-binding factor [Homo sapiens]
1504 1504 100% 0.099.72% NP_001350845.1
2
transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|NP_001390655.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|NP_001390656.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|NP_001390657.1| transcriptional repressor CTCF isoform 2 [Mus musculus] >ref|XP_021075675.1| transcriptional repressor CTCF isoform X2 [Mus pahari]
1493 1493 100% 0.098.10% NP_001345853.1
3
transcriptional repressor CTCF [Danio rerio] >gb|AAI63931.1| CCCTC-binding factor (zinc finger protein) [Danio rerio] >gb|AAI63935.1| CCCTC-binding factor (zinc finger protein) [Danio rerio] >gb|AAT11782.1| CCCTC-binding factor [Danio rerio]
989 989 100% 0.069.89% NP_001001844.1
4
CTCF [Drosophila melanogaster] >gb|ACL86092.1| CTCF-PA, partial [synthetic construct] >gb|AAF50573.2| CTCF [Drosophila melanogaster] >gb|AAK92918.1| GH14774p [Drosophila melanogaster] >gb|ACL92681.1| CTCF-PA [synthetic construct] >gb|AOQ04528.1| CTCF-RA, partial [synthetic construct]
293 293 48% 1e-8642.15% NP_648109.1
5
transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|NP_001390653.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|NP_001390654.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|NP_851839.1| transcriptional repressor CTCF isoform 1 [Mus musculus] >ref|XP_021075674.1| transcriptional repressor CTCF isoform X1 [Mus pahari] >ref|XP_029388279.1| transcriptional repressor CTCF isoform X1 [Mus pahari] >ref|XP_030099143.1| transcriptional repressor CTCF isoform X5 [Mus musculus] >ref|XP_036009639.1| transcriptional repressor CTCF isoform X5 [Mus musculus] >sp|Q61164.2| RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc finger protein; AltName: Full=CCCTC-binding factor; AltName: Full=CTCFL paralog [Mus musculus] >gb|AAH46398.1| CCCTC-binding factor [Mus musculus] >gb|AAH49131.1| CCCTC-binding factor [Mus musculus] >gb|AAH58240.1| CCCTC-binding factor [Mus musculus] >gb|EDL11292.1| CCCTC-binding factor, isoform CRA_a [Mus musculus] >gb|EDL11293.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
1488 1488 100% 0.097.96% NP_001390652.1