Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
4HKJ_A
Chain A, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|E Chain E, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|I Chain I, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|M Chain M, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus]
...
Query length:
280 aa
DOMAINS: and other(s) domains
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X6
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X6 [Mus musculus]
385 aa protein
accession:XP_006523740.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 2 precursor
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 2 precursor [Mus musculus] >dbj|BAE40397.1| unnamed protein product [Mus musculus]
360 aa protein
accession:NP_001334275.1
Query: Chain A, H-2 class I histocompatibility antigen, K-B alpha chain B alpha chain [Mus musculus] >pdb|4HKJ|I Chain I, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|M Chain M, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus]
...
Chain A, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|E Chain E, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|I Chain I, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|M Chain M, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus]
280 aa protein
accession:4HKJ_A
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X2
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X2 [Mus musculus]
438 aa protein
accession:XP_030105365.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X1
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X1 [Mus musculus]
458 aa protein
accession:XP_006523736.1
DOMAINS: and other(s) domains
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X6 [Mus musculus]
385 aa protein
accession:XP_006523740.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 2 precursor [Mus musculus] >dbj|BAE40397.1| unnamed protein product [Mus musculus]
360 aa protein
accession:NP_001334275.1
Chain A, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|E Chain E, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|I Chain I, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus] >pdb|4HKJ|M Chain M, H-2 class I histocompatibility antigen, K-B alpha chain [Mus musculus]
280 aa protein
accession:4HKJ_A
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X2 [Mus musculus]
438 aa protein
accession:XP_030105365.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform X1 [Mus musculus]
458 aa protein
accession:XP_006523736.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 591 | 591 | 100% | 0.0 | 100.00% | XP_030105365.1 | |
| 2 | 591 | 591 | 100% | 0.0 | 100.00% | XP_006523736.1 | |
| 3 | 590 | 590 | 100% | 0.0 | 100.00% | NP_001390292.1 | |
| 4 | 589 | 589 | 100% | 0.0 | 100.00% | NP_001334275.1 | |
| 5 | 589 | 589 | 100% | 0.0 | 100.00% | XP_006523740.1 |