Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_596265.2
transcription factor TFIIIB complex subunit Brf1 [Schizosaccharomyces pombe 972h-]
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Query length:
492 aa
DOMAINS: and other(s) domains
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TATA box-binding protein-associated factor, RNA polymerase III, subunit 2 se III, subunit 2 [Dictyostelium discoideum AX4]
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TATA box-binding protein-associated factor, RNA polymerase III, subunit 2 [Dictyostelium discoideum AX4] >gb|EAL66904.1| TATA box-binding protein-associated factor, RNA polymerase III, subunit 2 [Dictyostelium discoideum AX4]
706 aa protein
accession:XP_640891.1
BRF1, RNA polymerase III transcription initiation factor a isoform X1
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BRF1, RNA polymerase III transcription initiation factor a isoform X1 [Danio rerio]
661 aa protein
accession:XP_017214188.1
transcription factor IIIB 90 kDa subunit or IIIB 90 kDa subunit isoform X1 [Mus musculus] >gb|EDL18569.1| BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) [Mus musculus]
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transcription factor IIIB 90 kDa subunit [Mus musculus] >ref|XP_006516323.1| transcription factor IIIB 90 kDa subunit isoform X1 [Mus musculus] >gb|EDL18569.1| BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) [Mus musculus]
676 aa protein
accession:NP_082469.2
transcription factor IIIB 90 kDa subunit isoform X2 kDa subunit isoform X2 [Homo sapiens]
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transcription factor IIIB 90 kDa subunit isoform X2 [Homo sapiens] >ref|XP_054231884.1| transcription factor IIIB 90 kDa subunit isoform X2 [Homo sapiens]
632 aa protein
accession:XP_011534974.1
Query: transcription factor TFIIIB complex subunit Brf1
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transcription factor TFIIIB complex subunit Brf1 [Schizosaccharomyces pombe 972h-]
492 aa protein
accession:NP_596265.2
transcription factor TFIIIB subunit BRF1 on factor IIIB 70 kDa subunit; Short=TFIIIB; AltName: Full=B-related factor 1; Short=BRF-1 [Saccharomyces cerevisiae S288C] >pdb|6EU0|Z Chain Z, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F40|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F41|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F42|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F44|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|7Q5B|Z Chain Z, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >gb|AAA35148.1| transcription factor IIIB [Saccharomyces cerevisiae] >gb|AJR87708.1| Brf1p [Saccharomyces cerevisiae YJM693] >gb|EIW10595.1| Brf1p [Saccharomyces cerevisiae CEN.PK113-7D] >gb|AAB04945.1| transcription factor III B component [Saccharomyces cerevisiae] >gb|AAB23865.1| RNA polymerase III transcription factor 4, PCF4, pol III transcription initiation factor 4=TFIIB homolog [Saccharomyces cerevisiae, Peptide, 596 aa] [Saccharomyces cerevisiae]
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transcription factor TFIIIB subunit BRF1 [Saccharomyces cerevisiae S288C] >sp|P29056.1| RecName: Full=Transcription factor IIIB 70 kDa subunit; Short=TFIIIB; AltName: Full=B-related factor 1; Short=BRF-1 [Saccharomyces cerevisiae S288C] >pdb|6EU0|Z Chain Z, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F40|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F41|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F42|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F44|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|7Q5B|Z Chain Z, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >gb|AAA35148.1| transcription factor IIIB [Saccharomyces cerevisiae] >gb|AJR87708.1| Brf1p [Saccharomyces cerevisiae YJM693] >gb|EIW10595.1| Brf1p [Saccharomyces cerevisiae CEN.PK113-7D] >gb|AAB04945.1| transcription factor III B component [Saccharomyces cerevisiae] >gb|AAB23865.1| RNA polymerase III transcription factor 4, PCF4, pol III transcription initiation factor 4=TFIIB homolog [Saccharomyces cerevisiae, Peptide, 596 aa] [Saccharomyces cerevisiae]
596 aa protein
accession:NP_011762.1
DOMAINS: and other(s) domains
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TATA box-binding protein-associated factor, RNA polymerase III, subunit 2 [Dictyostelium discoideum AX4] >gb|EAL66904.1| TATA box-binding protein-associated factor, RNA polymerase III, subunit 2 [Dictyostelium discoideum AX4]
706 aa protein
accession:XP_640891.1
BRF1, RNA polymerase III transcription initiation factor a isoform X1 [Danio rerio]
661 aa protein
accession:XP_017214188.1
transcription factor IIIB 90 kDa subunit [Mus musculus] >ref|XP_006516323.1| transcription factor IIIB 90 kDa subunit isoform X1 [Mus musculus] >gb|EDL18569.1| BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) [Mus musculus]
676 aa protein
accession:NP_082469.2
transcription factor IIIB 90 kDa subunit isoform X2 [Homo sapiens] >ref|XP_054231884.1| transcription factor IIIB 90 kDa subunit isoform X2 [Homo sapiens]
632 aa protein
accession:XP_011534974.1
transcription factor TFIIIB complex subunit Brf1 [Schizosaccharomyces pombe 972h-]
492 aa protein
accession:NP_596265.2
transcription factor TFIIIB subunit BRF1 [Saccharomyces cerevisiae S288C] >sp|P29056.1| RecName: Full=Transcription factor IIIB 70 kDa subunit; Short=TFIIIB; AltName: Full=B-related factor 1; Short=BRF-1 [Saccharomyces cerevisiae S288C] >pdb|6EU0|Z Chain Z, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F40|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F41|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F42|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|6F44|V Chain V, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >pdb|7Q5B|Z Chain Z, Transcription factor IIIB 70 kDa subunit [Saccharomyces cerevisiae S288C] >gb|AAA35148.1| transcription factor IIIB [Saccharomyces cerevisiae] >gb|AJR87708.1| Brf1p [Saccharomyces cerevisiae YJM693] >gb|EIW10595.1| Brf1p [Saccharomyces cerevisiae CEN.PK113-7D] >gb|AAB04945.1| transcription factor III B component [Saccharomyces cerevisiae] >gb|AAB23865.1| RNA polymerase III transcription factor 4, PCF4, pol III transcription initiation factor 4=TFIIB homolog [Saccharomyces cerevisiae, Peptide, 596 aa] [Saccharomyces cerevisiae]
596 aa protein
accession:NP_011762.1
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Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 332 | 332 | 98% | 1e-105 | 35.22% | XP_017214188.1 | |
2 | 307 | 368 | 81% | 8e-97 | 51.18% | NP_011762.1 | |
3 | 299 | 299 | 59% | 7e-93 | 48.98% | NP_082469.2 | |
4 | 292 | 292 | 59% | 9e-91 | 48.98% | XP_011534974.1 | |
5 | 281 | 329 | 71% | 1e-85 | 46.90% | XP_640891.1 |