Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_002529.1
occludin isoform a [Homo sapiens]
...
Query length:
522 aa
DOMAINS: and other(s) domains
...
suppressor of triplolethal, isoform B riplolethal, isoform C [Drosophila melanogaster] >ref|NP_649155.3| suppressor of triplolethal, isoform A [Drosophila melanogaster] >sp|Q9VW51.3| RecName: Full=RNA polymerase II elongation factor Ell; Short=dELL [Drosophila melanogaster] >gb|AOQ13115.1| Su(Tpl)-PA [synthetic construct] >gb|AAF49098.3| suppressor of triplolethal, isoform A [Drosophila melanogaster] >gb|ACI88733.1| LD19974p [Drosophila melanogaster] >gb|ACM16731.1| LD12841p [Drosophila melanogaster] >gb|ACZ94748.1| suppressor of triplolethal, isoform B [Drosophila melanogaster]
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suppressor of triplolethal, isoform B [Drosophila melanogaster] >ref|NP_001287122.1| suppressor of triplolethal, isoform C [Drosophila melanogaster] >ref|NP_649155.3| suppressor of triplolethal, isoform A [Drosophila melanogaster] >sp|Q9VW51.3| RecName: Full=RNA polymerase II elongation factor Ell; Short=dELL [Drosophila melanogaster] >gb|AOQ13115.1| Su(Tpl)-PA [synthetic construct] >gb|AAF49098.3| suppressor of triplolethal, isoform A [Drosophila melanogaster] >gb|ACI88733.1| LD19974p [Drosophila melanogaster] >gb|ACM16731.1| LD12841p [Drosophila melanogaster] >gb|ACZ94748.1| suppressor of triplolethal, isoform B [Drosophila melanogaster]
1059 aa protein
accession:NP_001163477.1
occludin
...
occludin isoform c .1| occludin isoform X2 [Homo sapiens] >ref|XP_054188986.1| occludin isoform X2 [Homo sapiens] >ref|XP_054207357.1| occludin isoform X2 [Homo sapiens] >tpg|DAA01837.1| TPA_exp: tight junction protein occludin TM4 minus [Homo sapiens]
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occludin isoform c [Homo sapiens] >ref|XP_016864402.1| occludin isoform X2 [Homo sapiens] >ref|XP_054188986.1| occludin isoform X2 [Homo sapiens] >ref|XP_054207357.1| occludin isoform X2 [Homo sapiens] >tpg|DAA01837.1| TPA_exp: tight junction protein occludin TM4 minus [Homo sapiens]
468 aa protein
accession:NP_001397672.1
occludin isoform 1 .1| occludin isoform 1 [Mus musculus] >ref|NP_001347467.1| occludin isoform 1 [Mus musculus] >ref|NP_032782.1| occludin isoform 1 [Mus musculus] >sp|Q61146.1| RecName: Full=Occludin [Mus musculus] >gb|AAC52515.1| occludin [Mus musculus] >gb|AAI38680.1| Occludin [Mus musculus] >gb|AAI38681.1| Occludin [Mus musculus] >gb|AAI45372.1| Ocln protein [Mus musculus] >gb|EDL00804.1| occludin, isoform CRA_a [Mus musculus]
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occludin isoform 1 [Mus musculus] >ref|NP_001347466.1| occludin isoform 1 [Mus musculus] >ref|NP_001347467.1| occludin isoform 1 [Mus musculus] >ref|NP_032782.1| occludin isoform 1 [Mus musculus] >sp|Q61146.1| RecName: Full=Occludin [Mus musculus] >gb|AAC52515.1| occludin [Mus musculus] >gb|AAI38680.1| Occludin [Mus musculus] >gb|AAI38681.1| Occludin [Mus musculus] >gb|AAI45372.1| Ocln protein [Mus musculus] >gb|EDL00804.1| occludin, isoform CRA_a [Mus musculus]
521 aa protein
accession:NP_001347465.1
occludin isoform X1
...
occludin isoform X1 [Homo sapiens]
522 aa protein
accession:XP_054185462.1
DOMAINS: and other(s) domains
...
suppressor of triplolethal, isoform B [Drosophila melanogaster] >ref|NP_001287122.1| suppressor of triplolethal, isoform C [Drosophila melanogaster] >ref|NP_649155.3| suppressor of triplolethal, isoform A [Drosophila melanogaster] >sp|Q9VW51.3| RecName: Full=RNA polymerase II elongation factor Ell; Short=dELL [Drosophila melanogaster] >gb|AOQ13115.1| Su(Tpl)-PA [synthetic construct] >gb|AAF49098.3| suppressor of triplolethal, isoform A [Drosophila melanogaster] >gb|ACI88733.1| LD19974p [Drosophila melanogaster] >gb|ACM16731.1| LD12841p [Drosophila melanogaster] >gb|ACZ94748.1| suppressor of triplolethal, isoform B [Drosophila melanogaster]
1059 aa protein
accession:NP_001163477.1
occludin isoform c [Homo sapiens] >ref|XP_016864402.1| occludin isoform X2 [Homo sapiens] >ref|XP_054188986.1| occludin isoform X2 [Homo sapiens] >ref|XP_054207357.1| occludin isoform X2 [Homo sapiens] >tpg|DAA01837.1| TPA_exp: tight junction protein occludin TM4 minus [Homo sapiens]
468 aa protein
accession:NP_001397672.1
occludin isoform 1 [Mus musculus] >ref|NP_001347466.1| occludin isoform 1 [Mus musculus] >ref|NP_001347467.1| occludin isoform 1 [Mus musculus] >ref|NP_032782.1| occludin isoform 1 [Mus musculus] >sp|Q61146.1| RecName: Full=Occludin [Mus musculus] >gb|AAC52515.1| occludin [Mus musculus] >gb|AAI38680.1| Occludin [Mus musculus] >gb|AAI38681.1| Occludin [Mus musculus] >gb|AAI45372.1| Ocln protein [Mus musculus] >gb|EDL00804.1| occludin, isoform CRA_a [Mus musculus]
521 aa protein
accession:NP_001347465.1
occludin isoform X1 [Homo sapiens]
522 aa protein
accession:XP_054185462.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1079 | 1079 | 100% | 0.0 | 99.81% | XP_054185462.1 | |
2 | 936 | 936 | 99% | 0.0 | 89.27% | NP_001347465.1 | |
3 | 404 | 404 | 99% | 2e-135 | 43.58% | NP_997997.2 | |
4 | 40.4 | 40.4 | 19% | 0.041 | 25.93% | NP_001163477.1 | |
5 | 912 | 912 | 100% | 0.0 | 87.16% | NP_001397672.1 |