Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_000318.1
rod outer segment membrane protein 1 [Homo sapiens]
...
Query length:
351 aa
DOMAINS: and other(s) domains
...
tetraspanin 33B | tetraspanin 33B [Drosophila melanogaster] >gb|AAL68048.1| AT12771p [Drosophila melanogaster] >gb|ACL87461.1| Tsp33B-PA, partial [synthetic construct] >gb|AOQ14177.1| Tsp33B-PA [synthetic construct]
...
tetraspanin 33B [Drosophila melanogaster] >gb|AAF53119.1| tetraspanin 33B [Drosophila melanogaster] >gb|AAL68048.1| AT12771p [Drosophila melanogaster] >gb|ACL87461.1| Tsp33B-PA, partial [synthetic construct] >gb|AOQ14177.1| Tsp33B-PA [synthetic construct]
326 aa protein
accession:NP_523552.1
Tetraspanin 655.1| Tetraspanin [Caenorhabditis elegans]
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Tetraspanin [Caenorhabditis elegans] >emb|CAA93655.1| Tetraspanin [Caenorhabditis elegans]
282 aa protein
accession:NP_510445.1
rod outer segment membrane protein 1a anio rerio] >gb|AAH66562.1| Zgc:73336 [Danio rerio]
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rod outer segment membrane protein 1a [Danio rerio] >gb|AAH59654.1| Zgc:73336 protein [Danio rerio] >gb|AAH66562.1| Zgc:73336 [Danio rerio]
346 aa protein
accession:NP_957088.1
rod outer segment membrane protein 1 er segment membrane protein 1; Short=ROSP1 [Mus musculus] >gb|AAA40063.1| rod outer segment membrane protein 1 [Mus musculus domesticus] >gb|AAH14827.1| Rod outer segment membrane protein 1 [Mus musculus] >gb|EDL33403.1| rod outer segment membrane protein 1 [Mus musculus]
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rod outer segment membrane protein 1 [Mus musculus] >sp|P32958.1| RecName: Full=Rod outer segment membrane protein 1; Short=ROSP1 [Mus musculus] >gb|AAA40063.1| rod outer segment membrane protein 1 [Mus musculus domesticus] >gb|AAH14827.1| Rod outer segment membrane protein 1 [Mus musculus] >gb|EDL33403.1| rod outer segment membrane protein 1 [Mus musculus]
351 aa protein
accession:NP_033099.3
Query: rod outer segment membrane protein 1
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rod outer segment membrane protein 1 [Homo sapiens]
351 aa protein
accession:NP_000318.1
rod outer segment membrane protein 1 er segment membrane protein 1; Short=ROSP1; AltName: Full=Tetraspanin-23; Short=Tspan-23 [Homo sapiens] >gb|EAW74041.1| retinal outer segment membrane protein 1 [Homo sapiens]
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rod outer segment membrane protein 1 [Homo sapiens] >sp|Q03395.2| RecName: Full=Rod outer segment membrane protein 1; Short=ROSP1; AltName: Full=Tetraspanin-23; Short=Tspan-23 [Homo sapiens] >gb|EAW74041.1| retinal outer segment membrane protein 1 [Homo sapiens]
351 aa protein
accession:NP_000318.2
DOMAINS: and other(s) domains
...
tetraspanin 33B [Drosophila melanogaster] >gb|AAF53119.1| tetraspanin 33B [Drosophila melanogaster] >gb|AAL68048.1| AT12771p [Drosophila melanogaster] >gb|ACL87461.1| Tsp33B-PA, partial [synthetic construct] >gb|AOQ14177.1| Tsp33B-PA [synthetic construct]
326 aa protein
accession:NP_523552.1
Tetraspanin [Caenorhabditis elegans] >emb|CAA93655.1| Tetraspanin [Caenorhabditis elegans]
282 aa protein
accession:NP_510445.1
rod outer segment membrane protein 1a [Danio rerio] >gb|AAH59654.1| Zgc:73336 protein [Danio rerio] >gb|AAH66562.1| Zgc:73336 [Danio rerio]
346 aa protein
accession:NP_957088.1
rod outer segment membrane protein 1 [Mus musculus] >sp|P32958.1| RecName: Full=Rod outer segment membrane protein 1; Short=ROSP1 [Mus musculus] >gb|AAA40063.1| rod outer segment membrane protein 1 [Mus musculus domesticus] >gb|AAH14827.1| Rod outer segment membrane protein 1 [Mus musculus] >gb|EDL33403.1| rod outer segment membrane protein 1 [Mus musculus]
351 aa protein
accession:NP_033099.3
rod outer segment membrane protein 1 [Homo sapiens]
351 aa protein
accession:NP_000318.1
rod outer segment membrane protein 1 [Homo sapiens] >sp|Q03395.2| RecName: Full=Rod outer segment membrane protein 1; Short=ROSP1; AltName: Full=Tetraspanin-23; Short=Tspan-23 [Homo sapiens] >gb|EAW74041.1| retinal outer segment membrane protein 1 [Homo sapiens]
351 aa protein
accession:NP_000318.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 691 | 691 | 100% | 0.0 | 99.72% | NP_000318.2 | |
2 | 491 | 491 | 94% | 3e-174 | 84.89% | NP_033099.3 | |
3 | 256 | 256 | 89% | 6e-82 | 36.31% | NP_957088.1 | |
4 | 46.2 | 46.2 | 38% | 2e-04 | 27.66% | NP_523552.1 | |
5 | 43.1 | 43.1 | 30% | 0.002 | 26.50% | NP_510445.1 |