Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_000030.1 apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|NP_001304946.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|NP_001304947.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|NP_001412019.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|XP_004052230.1| apolipoprotein A-I [Gorilla gorilla gorilla] >ref|XP_047282822.1| apolipoprotein A-I isoform X1 [Homo sapiens] >ref|XP_054224593.1| apolipoprotein A-I isoform X1 [Homo sapiens] >ref|XP_054518702.1| apolipoprotein A-I [Pan troglodytes] >sp|G3QY98.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Gorilla gorilla gorilla] >sp|P02647.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; AltName: Full=Apolipoprotein A-I(1-242); Flags: Precursor [Homo sapiens] >sp|P0DJG0.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Pan troglodytes] >gb|ABM83999.1| apolipoprotein A-I [synthetic construct] >emb|SJX32498.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA62829.1| proapolipoprotein [Homo sapiens] >gb|AAB59514.1| preproapolipoprotein A-I [Homo sapiens] >gb|AAH05380.1| Apolipoprotein A-I [Homo sapiens] ... Query length: 267 aa

apolipoprotein A-IV b, tandem duplicate 1 precursor ...

apolipoprotein A-IV b, tandem duplicate 1 precursor [Danio rerio] >gb|AAI07621.1| Apolipoprotein A-IV [Danio rerio]

255 aa protein

accession:NP_001073330.1

Alignment Sequence Identical proteins

apolipoprotein A-IV b, tandem duplicate 2 precursor orm X2 [Danio rerio] >gb|AAI62715.1| Zgc:194131 [Danio rerio] >gb|AAI62716.1| Zgc:194131 [Danio rerio] ...

apolipoprotein A-IV b, tandem duplicate 2 precursor [Danio rerio] >ref|XP_021322408.1| apolipoprotein A-IV-like isoform X2 [Danio rerio] >gb|AAI62715.1| Zgc:194131 [Danio rerio] >gb|AAI62716.1| Zgc:194131 [Danio rerio]

255 aa protein

accession:NP_001122230.1

Alignment Sequence Identical proteins

apolipoprotein A-IV-like isoform X1 ...

apolipoprotein A-IV-like isoform X1 [Danio rerio]

314 aa protein

accession:XP_021322407.1

Alignment Sequence Identical proteins

apolipoprotein A-I preproprotein lipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Mus musculus] >dbj|BAC36241.1| unnamed protein product [Mus musculus] >dbj|BAE28968.1| unnamed protein product [Mus musculus] >dbj|BAE36448.1| unnamed protein product [Mus musculus] ...

apolipoprotein A-I preproprotein [Mus musculus] >sp|Q00623.2| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Mus musculus] >dbj|BAC36241.1| unnamed protein product [Mus musculus] >dbj|BAE28968.1| unnamed protein product [Mus musculus] >dbj|BAE36448.1| unnamed protein product [Mus musculus]

264 aa protein

accession:NP_033822.2

Alignment Sequence Identical proteins

Query: apolipoprotein A-I isoform 1 preproprotein soform 1 preproprotein [Homo sapiens] >ref|NP_001304947.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|NP_001412019.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|XP_004052230.1| apolipoprotein A-I [Gorilla gorilla gorilla] >ref|XP_047282822.1| apolipoprotein A-I isoform X1 [Homo sapiens] >ref|XP_054224593.1| apolipoprotein A-I isoform X1 [Homo sapiens] >ref|XP_054518702.1| apolipoprotein A-I [Pan troglodytes] >sp|G3QY98.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Gorilla gorilla gorilla] >sp|P02647.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; AltName: Full=Apolipoprotein A-I(1-242); Flags: Precursor [Homo sapiens] >sp|P0DJG0.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Pan troglodytes] >gb|ABM83999.1| apolipoprotein A-I [synthetic construct] >emb|SJX32498.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA62829.1| proapolipoprotein [Homo sapiens] >gb|AAB59514.1| preproapolipoprotein A-I [Homo sapiens] >gb|AAH05380.1| Apolipoprotein A-I [Homo sapiens] ...

apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|NP_001304946.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|NP_001304947.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|NP_001412019.1| apolipoprotein A-I isoform 1 preproprotein [Homo sapiens] >ref|XP_004052230.1| apolipoprotein A-I [Gorilla gorilla gorilla] >ref|XP_047282822.1| apolipoprotein A-I isoform X1 [Homo sapiens] >ref|XP_054224593.1| apolipoprotein A-I isoform X1 [Homo sapiens] >ref|XP_054518702.1| apolipoprotein A-I [Pan troglodytes] >sp|G3QY98.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Gorilla gorilla gorilla] >sp|P02647.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; AltName: Full=Apolipoprotein A-I(1-242); Flags: Precursor [Homo sapiens] >sp|P0DJG0.1| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Pan troglodytes] >gb|ABM83999.1| apolipoprotein A-I [synthetic construct] >emb|SJX32498.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA62829.1| proapolipoprotein [Homo sapiens] >gb|AAB59514.1| preproapolipoprotein A-I [Homo sapiens] >gb|AAH05380.1| Apolipoprotein A-I [Homo sapiens]

267 aa protein

accession:NP_000030.1

Sequence Identical proteins

apolipoprotein A-I isoform 2 oprotein A-I isoform 2 [Homo sapiens] >ref|NP_001412021.1| apolipoprotein A-I isoform 2 [Homo sapiens] ...

apolipoprotein A-I isoform 2 [Homo sapiens] >ref|NP_001412020.1| apolipoprotein A-I isoform 2 [Homo sapiens] >ref|NP_001412021.1| apolipoprotein A-I isoform 2 [Homo sapiens]

158 aa protein

accession:NP_001304950.1

Alignment Sequence Identical proteins

apolipoprotein A-IV b, tandem duplicate 1 precursor [Danio rerio] >gb|AAI07621.1| Apolipoprotein A-IV [Danio rerio]

255 aa protein

accession:NP_001073330.1

Alignment Sequence Identical proteins

255 aa protein

accession:NP_001122230.1

Alignment Sequence Identical proteins

apolipoprotein A-IV-like isoform X1 [Danio rerio]

314 aa protein

accession:XP_021322407.1

Alignment Sequence Identical proteins

264 aa protein

accession:NP_033822.2

Alignment Sequence Identical proteins

267 aa protein

accession:NP_000030.1

Sequence Identical proteins

apolipoprotein A-I isoform 2 [Homo sapiens] >ref|NP_001412020.1| apolipoprotein A-I isoform 2 [Homo sapiens] >ref|NP_001412021.1| apolipoprotein A-I isoform 2 [Homo sapiens]

158 aa protein

accession:NP_001304950.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_033822.2\|	apolipoprotein A-I preproprotein [Mus musculus] >sp\|Q00623.2\| RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Contains: RecName: Full=Proapolipoprotein A-I; Short=ProapoA-I; Contains: RecName: Full=Truncated apolipoprotein A-I; Flags: Precursor [Mus musculus] >dbj\|BAC36241.1\| unnamed protein product [Mus musculus] >dbj\|BAE28968.1\| unnamed protein product [Mus musculus] >dbj\|BAE36448.1\| unnamed protein product [Mus musculus]	334	334	100%	4e-115	65.17%	NP_033822.2
2 Select seq ref\|NP_001304950.1\|	apolipoprotein A-I isoform 2 [Homo sapiens] >ref\|NP_001412020.1\| apolipoprotein A-I isoform 2 [Homo sapiens] >ref\|NP_001412021.1\| apolipoprotein A-I isoform 2 [Homo sapiens]	313	313	59%	2e-108	100.00%	NP_001304950.1
3 Select seq ref\|NP_001073330.1\|	apolipoprotein A-IV b, tandem duplicate 1 precursor [Danio rerio] >gb\|AAI07621.1\| Apolipoprotein A-IV [Danio rerio]	98.6	98.6	96%	3e-23	27.80%	NP_001073330.1
4 Select seq ref\|NP_001122230.1\|	apolipoprotein A-IV b, tandem duplicate 2 precursor [Danio rerio] >ref\|XP_021322408.1\| apolipoprotein A-IV-like isoform X2 [Danio rerio] >gb\|AAI62715.1\| Zgc:194131 [Danio rerio] >gb\|AAI62716.1\| Zgc:194131 [Danio rerio]	95.5	95.5	98%	4e-22	28.03%	NP_001122230.1
5 Select seq ref\|XP_021322407.1\|	apolipoprotein A-IV-like isoform X1 [Danio rerio]	95.5	95.5	98%	1e-21	28.03%	XP_021322407.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments