Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_000439.1
V(D)J recombination-activating protein 1 [Homo sapiens]
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Query length:
1043 aa
DOMAINS: and other(s) domains
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RING zinc finger protein, putative ein PFNF54_01093 [Plasmodium falciparum NF54] >gb|KAF4330051.1| RING zinc finger protein [Plasmodium falciparum NF54] >gb|PKC48785.1| RING zinc finger protein [Plasmodium falciparum NF54] >emb|CAD49195.1| RING zinc finger protein, putative [Plasmodium falciparum 3D7]
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RING zinc finger protein, putative [Plasmodium falciparum 3D7] >gb|EWC89968.1| hypothetical protein PFNF54_01093 [Plasmodium falciparum NF54] >gb|KAF4330051.1| RING zinc finger protein [Plasmodium falciparum NF54] >gb|PKC48785.1| RING zinc finger protein [Plasmodium falciparum NF54] >emb|CAD49195.1| RING zinc finger protein, putative [Plasmodium falciparum 3D7]
875 aa protein
accession:XP_001351466.1
ATP-dependent helicase translocase/ubiquitin protein ligase E3 Rhp16/Rad16 [Schizosaccharomyces pombe]
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ATP-dependent helicase [Schizosaccharomyces pombe] >emb|CAA21065.1| DNA translocase/ubiquitin protein ligase E3 Rhp16/Rad16 [Schizosaccharomyces pombe]
963 aa protein
accession:NP_587701.1
V(D)J recombination-activating protein 1 bination-activating protein 1; Short=RAG-1; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Danio rerio] >gb|AAC60365.1| recombinase [Danio rerio]
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V(D)J recombination-activating protein 1 [Danio rerio] >sp|O13033.1| RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Danio rerio] >gb|AAC60365.1| recombinase [Danio rerio]
1057 aa protein
accession:NP_571464.1
V(D)J recombination-activating protein 1 bination-activating protein 1; Short=RAG-1; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Mus musculus] >gb|AAI38343.1| Recombination activating gene 1 [Mus musculus] >gb|EDL27655.1| recombination activating gene 1 [Mus musculus]
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V(D)J recombination-activating protein 1 [Mus musculus] >sp|P15919.2| RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Mus musculus] >gb|AAI38343.1| Recombination activating gene 1 [Mus musculus] >gb|EDL27655.1| recombination activating gene 1 [Mus musculus]
1040 aa protein
accession:NP_033045.2
Query: V(D)J recombination-activating protein 1
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V(D)J recombination-activating protein 1 [Homo sapiens]
1043 aa protein
accession:NP_000439.1
V(D)J recombination-activating protein 1 n-activating protein 1 [Homo sapiens] >ref|NP_001364207.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364208.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364209.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|XP_047283340.1| V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens] >sp|P15918.2| RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; AltName: Full=RING finger protein 74; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Homo sapiens] >gb|EAW68118.1| recombination activating gene 1 [Homo sapiens] >gb|KAI4070808.1| recombination activating 1 [Homo sapiens]
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V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364206.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364207.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364208.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364209.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|XP_047283340.1| V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens] >sp|P15918.2| RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; AltName: Full=RING finger protein 74; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Homo sapiens] >gb|EAW68118.1| recombination activating gene 1 [Homo sapiens] >gb|KAI4070808.1| recombination activating 1 [Homo sapiens]
1043 aa protein
accession:NP_000439.2
DOMAINS: and other(s) domains
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RING zinc finger protein, putative [Plasmodium falciparum 3D7] >gb|EWC89968.1| hypothetical protein PFNF54_01093 [Plasmodium falciparum NF54] >gb|KAF4330051.1| RING zinc finger protein [Plasmodium falciparum NF54] >gb|PKC48785.1| RING zinc finger protein [Plasmodium falciparum NF54] >emb|CAD49195.1| RING zinc finger protein, putative [Plasmodium falciparum 3D7]
875 aa protein
accession:XP_001351466.1
ATP-dependent helicase [Schizosaccharomyces pombe] >emb|CAA21065.1| DNA translocase/ubiquitin protein ligase E3 Rhp16/Rad16 [Schizosaccharomyces pombe]
963 aa protein
accession:NP_587701.1
V(D)J recombination-activating protein 1 [Danio rerio] >sp|O13033.1| RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Danio rerio] >gb|AAC60365.1| recombinase [Danio rerio]
1057 aa protein
accession:NP_571464.1
V(D)J recombination-activating protein 1 [Mus musculus] >sp|P15919.2| RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Mus musculus] >gb|AAI38343.1| Recombination activating gene 1 [Mus musculus] >gb|EDL27655.1| recombination activating gene 1 [Mus musculus]
1040 aa protein
accession:NP_033045.2
V(D)J recombination-activating protein 1 [Homo sapiens]
1043 aa protein
accession:NP_000439.1
V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364206.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364207.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364208.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|NP_001364209.1| V(D)J recombination-activating protein 1 [Homo sapiens] >ref|XP_047283340.1| V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens] >sp|P15918.2| RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; AltName: Full=RING finger protein 74; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1; AltName: Full=RING-type E3 ubiquitin transferase RAG1 [Homo sapiens] >gb|EAW68118.1| recombination activating gene 1 [Homo sapiens] >gb|KAI4070808.1| recombination activating 1 [Homo sapiens]
1043 aa protein
accession:NP_000439.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2174 | 2174 | 100% | 0.0 | 99.90% | NP_000439.2 | |
| 2 | 1969 | 1969 | 100% | 0.0 | 89.93% | NP_033045.2 | |
| 3 | 1248 | 1248 | 98% | 0.0 | 59.23% | NP_571464.1 | |
| 4 | 55.8 | 55.8 | 7% | 2e-06 | 31.40% | NP_587701.1 | |
| 5 | 54.3 | 54.3 | 8% | 7e-06 | 37.50% | XP_001351466.1 |