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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_064543.3 exosome complex component RRP46 [Homo sapiens] >sp|Q9NQT4.1| RecName: Full=Exosome complex component RRP46; AltName: Full=Chronic myelogenous leukemia tumor antigen 28; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46; AltName: Full=p12B [Homo sapiens] >gb|AAF82135.1| exosome component Rrp46 [Homo sapiens] >gb|KAI4042879.1| exosome component 5 [Homo sapiens] >dbj|BAG73135.1| exosome component 5, partial [synthetic construct] ... Query length: 235 aa
Rrp46 AAF54530.3| Rrp46 ACJ23457.1| FI06805p AOQ05201.1| Rrp46-RA, partial [synthetic construct] >gb|AOQ11455.1| Rrp46-RA [synthetic construct] ...
Rrp46 [Drosophila melanogaster] >gb|AAF54530.3| Rrp46 [Drosophila melanogaster] >gb|ACJ23457.1| FI06805p [Drosophila melanogaster] >gb|AOQ05201.1| Rrp46-RA, partial [synthetic construct] >gb|AOQ11455.1| Rrp46-RA [synthetic construct]
233 aa protein
accession:NP_650001.2
Ribosomal protein S5 domain 2-like superfamily protein ke superfamily protein [Arabidopsis thaliana] >ref|NP_001030819.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001078250.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001190019.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001325681.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_190207.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >sp|Q9LX74.1| RecName: Full=Exosome complex exonuclease RRP46 homolog; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46 [Arabidopsis thaliana] >gb|KAG7633464.1| Ribosomal protein S5 domain 2-type fold [Arabidopsis suecica] >gb|AAO24557.1| At3g46210 [Arabidopsis thaliana] >gb|AEE78129.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >gb|AEE78130.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >gb|AEE78131.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] ...
Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001030818.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001030819.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001078250.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001190019.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001325681.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_190207.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >sp|Q9LX74.1| RecName: Full=Exosome complex exonuclease RRP46 homolog; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46 [Arabidopsis thaliana] >gb|KAG7633464.1| Ribosomal protein S5 domain 2-type fold [Arabidopsis suecica] >gb|AAO24557.1| At3g46210 [Arabidopsis thaliana] >gb|AEE78129.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >gb|AEE78130.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >gb|AEE78131.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana]
239 aa protein
accession:NP_001030817.1
hypothetical protein DDB_G0284053 tein DDB_G0284053 [Dictyostelium discoideum AX4] ...
hypothetical protein DDB_G0284053 [Dictyostelium discoideum AX4] >gb|EAL65367.1| hypothetical protein DDB_G0284053 [Dictyostelium discoideum AX4]
237 aa protein
accession:XP_638714.1
exosome complex component RRP46 ...
exosome complex component RRP46 [Danio rerio]
230 aa protein
accession:NP_001038817.2
Query: exosome complex component RRP46 osome complex component RRP46; AltName: Full=Chronic myelogenous leukemia tumor antigen 28; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46; AltName: Full=p12B [Homo sapiens] >gb|AAF82135.1| exosome component Rrp46 [Homo sapiens] >gb|KAI4042879.1| exosome component 5 [Homo sapiens] >dbj|BAG73135.1| exosome component 5, partial [synthetic construct] ...
exosome complex component RRP46 [Homo sapiens] >sp|Q9NQT4.1| RecName: Full=Exosome complex component RRP46; AltName: Full=Chronic myelogenous leukemia tumor antigen 28; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46; AltName: Full=p12B [Homo sapiens] >gb|AAF82135.1| exosome component Rrp46 [Homo sapiens] >gb|KAI4042879.1| exosome component 5 [Homo sapiens] >dbj|BAG73135.1| exosome component 5, partial [synthetic construct]
235 aa protein
accession:NP_064543.3
exosome complex component RRP46 osome complex component RRP46; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46 [Mus musculus] >gb|EDL24247.1| exosome component 5, isoform CRA_b [Mus musculus] >dbj|BAB24607.1| unnamed protein product [Mus musculus] >dbj|BAB24993.1| unnamed protein product [Mus musculus] ...
exosome complex component RRP46 [Mus musculus] >sp|Q9CRA8.1| RecName: Full=Exosome complex component RRP46; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46 [Mus musculus] >gb|EDL24247.1| exosome component 5, isoform CRA_b [Mus musculus] >dbj|BAB24607.1| unnamed protein product [Mus musculus] >dbj|BAB24993.1| unnamed protein product [Mus musculus]
235 aa protein
accession:NP_613052.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
exosome complex component RRP46 [Mus musculus] >sp|Q9CRA8.1| RecName: Full=Exosome complex component RRP46; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46 [Mus musculus] >gb|EDL24247.1| exosome component 5, isoform CRA_b [Mus musculus] >dbj|BAB24607.1| unnamed protein product [Mus musculus] >dbj|BAB24993.1| unnamed protein product [Mus musculus]
403 403 100% 2e-14389.36% NP_613052.1
2
exosome complex component RRP46 [Danio rerio]
301 301 88% 4e-10365.22% NP_001038817.2
3
Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001030818.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001030819.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001078250.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001190019.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_001325681.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >ref|NP_190207.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >sp|Q9LX74.1| RecName: Full=Exosome complex exonuclease RRP46 homolog; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46 [Arabidopsis thaliana] >gb|KAG7633464.1| Ribosomal protein S5 domain 2-type fold [Arabidopsis suecica] >gb|AAO24557.1| At3g46210 [Arabidopsis thaliana] >gb|AEE78129.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >gb|AEE78130.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana] >gb|AEE78131.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana]
162 162 88% 2e-4840.44% NP_001030817.1
4
hypothetical protein DDB_G0284053 [Dictyostelium discoideum AX4] >gb|EAL65367.1| hypothetical protein DDB_G0284053 [Dictyostelium discoideum AX4]
158 158 87% 8e-4736.41% XP_638714.1
5
Rrp46 [Drosophila melanogaster] >gb|AAF54530.3| Rrp46 [Drosophila melanogaster] >gb|ACJ23457.1| FI06805p [Drosophila melanogaster] >gb|AOQ05201.1| Rrp46-RA, partial [synthetic construct] >gb|AOQ11455.1| Rrp46-RA [synthetic construct]
153 153 88% 5e-4538.46% NP_650001.2