Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_005227.1
DNA repair endonuclease XPF [Homo sapiens] >sp|Q92889.3| RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA excision repair protein ERCC-4; AltName: Full=DNA repair protein complementing XP-F cells; AltName: Full=Xeroderma pigmentosum group F-complementing protein [Homo sapiens] >pdb|6SXA|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >pdb|6SXB|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >gb|AAI60102.1| Excision repair cross-complementing rodent repair deficiency, complementation group 4 [synthetic construct] >gb|AAB50174.1| DNA repair protein [Homo sapiens] >gb|AAL91593.1| excision repair cross-complementing rodent repair deficiency, complementation group 4 [Homo sapiens] >gb|EAW85117.1| excision repair cross-complementing rodent repair deficiency, complementation group 4, isoform CRA_a [Homo sapiens] >gb|KAI2577233.1| ERCC excision repair 4, endonuclease catalytic subunit [Homo sapiens]
...
Query length:
916 aa
DOMAINS: and other(s) domains
...
DNA repair endonuclease XPF l=DNA repair protein rad16 [Schizosaccharomyces pombe 972h-] >emb|CAA20694.2| DNA repair endonuclease XPF [Schizosaccharomyces pombe]
...
DNA repair endonuclease XPF [Schizosaccharomyces pombe] >sp|P36617.2| RecName: Full=DNA repair protein rad16 [Schizosaccharomyces pombe 972h-] >emb|CAA20694.2| DNA repair endonuclease XPF [Schizosaccharomyces pombe]
877 aa protein
accession:NP_587855.2
meiotic 9, isoform B eiotic 9, isoform A [Drosophila melanogaster] >sp|Q24087.2| RecName: Full=DNA repair endonuclease XPF; AltName: Full=Protein meiotic 9 [Drosophila melanogaster] >gb|AAF45938.1| meiotic 9, isoform A [Drosophila melanogaster] >gb|AGV77159.1| FI21265p1 [Drosophila melanogaster] >gb|AHN59330.1| meiotic 9, isoform B [Drosophila melanogaster]
...
meiotic 9, isoform B [Drosophila melanogaster] >ref|NP_525068.1| meiotic 9, isoform A [Drosophila melanogaster] >sp|Q24087.2| RecName: Full=DNA repair endonuclease XPF; AltName: Full=Protein meiotic 9 [Drosophila melanogaster] >gb|AAF45938.1| meiotic 9, isoform A [Drosophila melanogaster] >gb|AGV77159.1| FI21265p1 [Drosophila melanogaster] >gb|AHN59330.1| meiotic 9, isoform B [Drosophila melanogaster]
961 aa protein
accession:NP_001284859.1
DNA repair endonuclease XPF epair cross-complementing rodent repair deficiency, complementation group 4 [Danio rerio]
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DNA repair endonuclease XPF [Danio rerio] >gb|AAH54895.1| Excision repair cross-complementing rodent repair deficiency, complementation group 4 [Danio rerio]
886 aa protein
accession:NP_956079.1
DNA repair endonuclease XPF l=DNA repair endonuclease XPF; AltName: Full=DNA excision repair protein ERCC-4 [Mus musculus] >gb|AAC03240.1| ERCC4_MOUSE [Mus musculus] >gb|EDK97360.1| excision repair cross-complementing rodent repair deficiency, complementation group 4 [Mus musculus]
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DNA repair endonuclease XPF [Mus musculus] >sp|Q9QZD4.3| RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA excision repair protein ERCC-4 [Mus musculus] >gb|AAC03240.1| ERCC4_MOUSE [Mus musculus] >gb|EDK97360.1| excision repair cross-complementing rodent repair deficiency, complementation group 4 [Mus musculus]
917 aa protein
accession:NP_056584.2
Query: DNA repair endonuclease XPF l=DNA repair endonuclease XPF; AltName: Full=DNA excision repair protein ERCC-4; AltName: Full=DNA repair protein complementing XP-F cells; AltName: Full=Xeroderma pigmentosum group F-complementing protein [Homo sapiens] >pdb|6SXA|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >pdb|6SXB|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >gb|AAI60102.1| Excision repair cross-complementing rodent repair deficiency, complementation group 4 [synthetic construct] >gb|AAB50174.1| DNA repair protein [Homo sapiens] >gb|AAL91593.1| excision repair cross-complementing rodent repair deficiency, complementation group 4 [Homo sapiens] >gb|EAW85117.1| excision repair cross-complementing rodent repair deficiency, complementation group 4, isoform CRA_a [Homo sapiens] >gb|KAI2577233.1| ERCC excision repair 4, endonuclease catalytic subunit [Homo sapiens]
...
DNA repair endonuclease XPF [Homo sapiens] >sp|Q92889.3| RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA excision repair protein ERCC-4; AltName: Full=DNA repair protein complementing XP-F cells; AltName: Full=Xeroderma pigmentosum group F-complementing protein [Homo sapiens] >pdb|6SXA|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >pdb|6SXB|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >gb|AAI60102.1| Excision repair cross-complementing rodent repair deficiency, complementation group 4 [synthetic construct] >gb|AAB50174.1| DNA repair protein [Homo sapiens] >gb|AAL91593.1| excision repair cross-complementing rodent repair deficiency, complementation group 4 [Homo sapiens] >gb|EAW85117.1| excision repair cross-complementing rodent repair deficiency, complementation group 4, isoform CRA_a [Homo sapiens] >gb|KAI2577233.1| ERCC excision repair 4, endonuclease catalytic subunit [Homo sapiens]
916 aa protein
accession:NP_005227.1
DNA repair endonuclease XPF isoform X1
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DNA repair endonuclease XPF isoform X1 [Homo sapiens]
962 aa protein
accession:XP_011520726.1
DOMAINS: and other(s) domains
...
DNA repair endonuclease XPF [Schizosaccharomyces pombe] >sp|P36617.2| RecName: Full=DNA repair protein rad16 [Schizosaccharomyces pombe 972h-] >emb|CAA20694.2| DNA repair endonuclease XPF [Schizosaccharomyces pombe]
877 aa protein
accession:NP_587855.2
meiotic 9, isoform B [Drosophila melanogaster] >ref|NP_525068.1| meiotic 9, isoform A [Drosophila melanogaster] >sp|Q24087.2| RecName: Full=DNA repair endonuclease XPF; AltName: Full=Protein meiotic 9 [Drosophila melanogaster] >gb|AAF45938.1| meiotic 9, isoform A [Drosophila melanogaster] >gb|AGV77159.1| FI21265p1 [Drosophila melanogaster] >gb|AHN59330.1| meiotic 9, isoform B [Drosophila melanogaster]
961 aa protein
accession:NP_001284859.1
DNA repair endonuclease XPF [Danio rerio] >gb|AAH54895.1| Excision repair cross-complementing rodent repair deficiency, complementation group 4 [Danio rerio]
886 aa protein
accession:NP_956079.1
DNA repair endonuclease XPF [Mus musculus] >sp|Q9QZD4.3| RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA excision repair protein ERCC-4 [Mus musculus] >gb|AAC03240.1| ERCC4_MOUSE [Mus musculus] >gb|EDK97360.1| excision repair cross-complementing rodent repair deficiency, complementation group 4 [Mus musculus]
917 aa protein
accession:NP_056584.2
DNA repair endonuclease XPF [Homo sapiens] >sp|Q92889.3| RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA excision repair protein ERCC-4; AltName: Full=DNA repair protein complementing XP-F cells; AltName: Full=Xeroderma pigmentosum group F-complementing protein [Homo sapiens] >pdb|6SXA|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >pdb|6SXB|F Chain F, DNA repair endonuclease XPF [Homo sapiens] >gb|AAI60102.1| Excision repair cross-complementing rodent repair deficiency, complementation group 4 [synthetic construct] >gb|AAB50174.1| DNA repair protein [Homo sapiens] >gb|AAL91593.1| excision repair cross-complementing rodent repair deficiency, complementation group 4 [Homo sapiens] >gb|EAW85117.1| excision repair cross-complementing rodent repair deficiency, complementation group 4, isoform CRA_a [Homo sapiens] >gb|KAI2577233.1| ERCC excision repair 4, endonuclease catalytic subunit [Homo sapiens]
916 aa protein
accession:NP_005227.1
DNA repair endonuclease XPF isoform X1 [Homo sapiens]
962 aa protein
accession:XP_011520726.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1863 | 1863 | 100% | 0.0 | 95.22% | XP_011520726.1 | |
2 | 1639 | 1639 | 100% | 0.0 | 86.04% | NP_056584.2 | |
3 | 1159 | 1159 | 97% | 0.0 | 63.41% | NP_956079.1 | |
4 | 660 | 660 | 97% | 0.0 | 40.11% | NP_001284859.1 | |
5 | 514 | 514 | 96% | 1e-167 | 34.54% | NP_587855.2 |