Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001006970.1
interferon regulatory factor 3 [Rattus norvegicus] >gb|AAH83776.1| Interferon regulatory factor 3 [Rattus norvegicus] >gb|EDM07431.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus] >gb|EDM07432.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus]
...
Query length:
421 aa
DOMAINS: and other(s) domains
...
interferon regulatory factor 3 gulatory factor 3 [Danio rerio]
...
interferon regulatory factor 3 [Danio rerio] >gb|ABY91288.1| interferon regulatory factor 3 [Danio rerio]
426 aa protein
accession:NP_001137376.1
interferon regulatory factor 3 isoform 1 ory factor 3 isoform X2 [Homo sapiens] >ref|XP_016882256.1| interferon regulatory factor 3 isoform X2 [Homo sapiens] >sp|Q14653.1| RecName: Full=Interferon regulatory factor 3; Short=IRF-3 [Homo sapiens] >dbj|BAG10915.1| interferon regulatory factor 3, partial [synthetic construct] >gb|AAH71721.1| IRF3 protein [Homo sapiens] >gb|KAI2592319.1| interferon regulatory factor 3 [Homo sapiens] >gb|KAI2592320.1| interferon regulatory factor 3 [Homo sapiens] >gb|KAI2592321.1| interferon regulatory factor 3 [Homo sapiens]
...
interferon regulatory factor 3 isoform 1 [Homo sapiens] >ref|XP_016882255.1| interferon regulatory factor 3 isoform X2 [Homo sapiens] >ref|XP_016882256.1| interferon regulatory factor 3 isoform X2 [Homo sapiens] >sp|Q14653.1| RecName: Full=Interferon regulatory factor 3; Short=IRF-3 [Homo sapiens] >dbj|BAG10915.1| interferon regulatory factor 3, partial [synthetic construct] >gb|AAH71721.1| IRF3 protein [Homo sapiens] >gb|KAI2592319.1| interferon regulatory factor 3 [Homo sapiens] >gb|KAI2592320.1| interferon regulatory factor 3 [Homo sapiens] >gb|KAI2592321.1| interferon regulatory factor 3 [Homo sapiens]
427 aa protein
accession:NP_001562.1
interferon regulatory factor 3 isoform X5
...
interferon regulatory factor 3 isoform X5 [Homo sapiens]
374 aa protein
accession:XP_047294739.1
interferon regulatory factor 3 isoform 3
...
interferon regulatory factor 3 isoform 3 [Homo sapiens]
392 aa protein
accession:NP_001184052.1
Query: interferon regulatory factor 3 gulatory factor 3 [Rattus norvegicus] >gb|EDM07431.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus] >gb|EDM07432.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus]
...
interferon regulatory factor 3 [Rattus norvegicus] >gb|AAH83776.1| Interferon regulatory factor 3 [Rattus norvegicus] >gb|EDM07431.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus] >gb|EDM07432.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus]
421 aa protein
accession:NP_001006970.1
interferon regulatory factor 3 on regulatory factor 3 isoform X1 [Mus musculus] >ref|XP_006541059.1| interferon regulatory factor 3 isoform X1 [Mus musculus] >sp|P70671.1| RecName: Full=Interferon regulatory factor 3; Short=IRF-3 [Mus musculus] >gb|AAB36924.1| interferon regulatory factor 3 [Mus musculus] >gb|AAB36925.1| interferon regulatory factor 3 [Mus musculus] >gb|AAH50882.1| Interferon regulatory factor 3 [Mus musculus] >gb|EDL22782.1| interferon regulatory factor 3, isoform CRA_a [Mus musculus] >gb|EDL22786.1| interferon regulatory factor 3, isoform CRA_a [Mus musculus]
...
interferon regulatory factor 3 [Mus musculus] >ref|XP_006541058.1| interferon regulatory factor 3 isoform X1 [Mus musculus] >ref|XP_006541059.1| interferon regulatory factor 3 isoform X1 [Mus musculus] >sp|P70671.1| RecName: Full=Interferon regulatory factor 3; Short=IRF-3 [Mus musculus] >gb|AAB36924.1| interferon regulatory factor 3 [Mus musculus] >gb|AAB36925.1| interferon regulatory factor 3 [Mus musculus] >gb|AAH50882.1| Interferon regulatory factor 3 [Mus musculus] >gb|EDL22782.1| interferon regulatory factor 3, isoform CRA_a [Mus musculus] >gb|EDL22786.1| interferon regulatory factor 3, isoform CRA_a [Mus musculus]
419 aa protein
accession:NP_058545.1
DOMAINS: and other(s) domains
...
interferon regulatory factor 3 [Danio rerio] >gb|ABY91288.1| interferon regulatory factor 3 [Danio rerio]
426 aa protein
accession:NP_001137376.1
interferon regulatory factor 3 isoform 1 [Homo sapiens] >ref|XP_016882255.1| interferon regulatory factor 3 isoform X2 [Homo sapiens] >ref|XP_016882256.1| interferon regulatory factor 3 isoform X2 [Homo sapiens] >sp|Q14653.1| RecName: Full=Interferon regulatory factor 3; Short=IRF-3 [Homo sapiens] >dbj|BAG10915.1| interferon regulatory factor 3, partial [synthetic construct] >gb|AAH71721.1| IRF3 protein [Homo sapiens] >gb|KAI2592319.1| interferon regulatory factor 3 [Homo sapiens] >gb|KAI2592320.1| interferon regulatory factor 3 [Homo sapiens] >gb|KAI2592321.1| interferon regulatory factor 3 [Homo sapiens]
427 aa protein
accession:NP_001562.1
interferon regulatory factor 3 isoform X5 [Homo sapiens]
374 aa protein
accession:XP_047294739.1
interferon regulatory factor 3 isoform 3 [Homo sapiens]
392 aa protein
accession:NP_001184052.1
interferon regulatory factor 3 [Rattus norvegicus] >gb|AAH83776.1| Interferon regulatory factor 3 [Rattus norvegicus] >gb|EDM07431.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus] >gb|EDM07432.1| interferon regulatory factor 3, isoform CRA_c [Rattus norvegicus]
421 aa protein
accession:NP_001006970.1
interferon regulatory factor 3 [Mus musculus] >ref|XP_006541058.1| interferon regulatory factor 3 isoform X1 [Mus musculus] >ref|XP_006541059.1| interferon regulatory factor 3 isoform X1 [Mus musculus] >sp|P70671.1| RecName: Full=Interferon regulatory factor 3; Short=IRF-3 [Mus musculus] >gb|AAB36924.1| interferon regulatory factor 3 [Mus musculus] >gb|AAB36925.1| interferon regulatory factor 3 [Mus musculus] >gb|AAH50882.1| Interferon regulatory factor 3 [Mus musculus] >gb|EDL22782.1| interferon regulatory factor 3, isoform CRA_a [Mus musculus] >gb|EDL22786.1| interferon regulatory factor 3, isoform CRA_a [Mus musculus]
419 aa protein
accession:NP_058545.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 744 | 744 | 99% | 0.0 | 88.33% | NP_058545.1 | |
2 | 609 | 609 | 100% | 0.0 | 73.60% | NP_001562.1 | |
3 | 177 | 177 | 94% | 8e-50 | 32.29% | NP_001137376.1 | |
4 | 511 | 511 | 87% | 0.0 | 71.47% | XP_047294739.1 | |
5 | 511 | 511 | 86% | 3e-180 | 71.85% | NP_001184052.1 |