Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_037448.2
CCR4-NOT transcription complex subunit 4 isoform a [Homo sapiens]
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Query length:
639 aa
DOMAINS: and other(s) domains
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CCR4-NOT transcription complex subunit 4, isoform H unit 4, isoform H [Drosophila melanogaster]
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CCR4-NOT transcription complex subunit 4, isoform H [Drosophila melanogaster] >gb|ADV37026.1| CCR4-NOT transcription complex subunit 4, isoform H [Drosophila melanogaster]
1059 aa protein
accession:NP_001188776.1
CCR4-NOT transcription complex subunit 4 complex subunit 4 [Caenorhabditis elegans]
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CCR4-NOT transcription complex subunit 4 [Caenorhabditis elegans] >emb|CDM63496.1| CCR4-NOT transcription complex subunit 4 [Caenorhabditis elegans]
794 aa protein
accession:NP_001294150.1
uncharacterized protein LOC394144 rerio]
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uncharacterized protein LOC394144 [Danio rerio] >gb|AAH54913.1| Zgc:63566 [Danio rerio]
798 aa protein
accession:NP_957463.1
CCR4-NOT transcription complex subunit 4 isoform 4
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CCR4-NOT transcription complex subunit 4 isoform 4 [Mus musculus] >gb|AAH48243.1| Cnot4 protein [Mus musculus]
639 aa protein
accession:NP_001157884.1
Query: CCR4-NOT transcription complex subunit 4 isoform a
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CCR4-NOT transcription complex subunit 4 isoform a [Homo sapiens]
639 aa protein
accession:NP_037448.2
CCR4-NOT transcription complex subunit 4 isoform c ex subunit 4 isoform X3 [Macaca fascicularis] >ref|XP_007981213.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Chlorocebus sabaeus] >ref|XP_011722077.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca nemestrina] >ref|XP_011855513.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Mandrillus leucophaeus] >ref|XP_011923610.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Cercocebus atys] >ref|XP_014990461.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca mulatta] >ref|XP_017743235.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Rhinopithecus bieti] >ref|XP_030788363.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Rhinopithecus roxellana] >ref|XP_030868936.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Gorilla gorilla gorilla] >ref|XP_033050629.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Trachypithecus francoisi] >ref|XP_047276369.1| CCR4-NOT transcription complex subunit 4 isoform X2 [Homo sapiens] >ref|XP_050638363.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca thibetana thibetana] >ref|XP_054214244.1| CCR4-NOT transcription complex subunit 4 isoform X2 [Homo sapiens] >gb|EAW83850.1| CCR4-NOT transcription complex, subunit 4, isoform CRA_b [Homo sapiens] >gb|EAW83851.1| CCR4-NOT transcription complex, subunit 4, isoform CRA_b [Homo sapiens] >gb|KAI2548012.1| CCR4-NOT transcription complex subunit 4 [Homo sapiens] >gb|KAI4015935.1| CCR4-NOT transcription complex subunit 4 [Homo sapiens]
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CCR4-NOT transcription complex subunit 4 isoform c [Homo sapiens] >ref|XP_005550912.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca fascicularis] >ref|XP_007981213.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Chlorocebus sabaeus] >ref|XP_011722077.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca nemestrina] >ref|XP_011855513.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Mandrillus leucophaeus] >ref|XP_011923610.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Cercocebus atys] >ref|XP_014990461.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca mulatta] >ref|XP_017743235.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Rhinopithecus bieti] >ref|XP_030788363.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Rhinopithecus roxellana] >ref|XP_030868936.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Gorilla gorilla gorilla] >ref|XP_033050629.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Trachypithecus francoisi] >ref|XP_047276369.1| CCR4-NOT transcription complex subunit 4 isoform X2 [Homo sapiens] >ref|XP_050638363.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca thibetana thibetana] >ref|XP_054214244.1| CCR4-NOT transcription complex subunit 4 isoform X2 [Homo sapiens] >gb|EAW83850.1| CCR4-NOT transcription complex, subunit 4, isoform CRA_b [Homo sapiens] >gb|EAW83851.1| CCR4-NOT transcription complex, subunit 4, isoform CRA_b [Homo sapiens] >gb|KAI2548012.1| CCR4-NOT transcription complex subunit 4 [Homo sapiens] >gb|KAI4015935.1| CCR4-NOT transcription complex subunit 4 [Homo sapiens]
642 aa protein
accession:NP_001177776.1
DOMAINS: and other(s) domains
...
CCR4-NOT transcription complex subunit 4, isoform H [Drosophila melanogaster] >gb|ADV37026.1| CCR4-NOT transcription complex subunit 4, isoform H [Drosophila melanogaster]
1059 aa protein
accession:NP_001188776.1
CCR4-NOT transcription complex subunit 4 [Caenorhabditis elegans] >emb|CDM63496.1| CCR4-NOT transcription complex subunit 4 [Caenorhabditis elegans]
794 aa protein
accession:NP_001294150.1
uncharacterized protein LOC394144 [Danio rerio] >gb|AAH54913.1| Zgc:63566 [Danio rerio]
798 aa protein
accession:NP_957463.1
CCR4-NOT transcription complex subunit 4 isoform 4 [Mus musculus] >gb|AAH48243.1| Cnot4 protein [Mus musculus]
639 aa protein
accession:NP_001157884.1
CCR4-NOT transcription complex subunit 4 isoform a [Homo sapiens]
639 aa protein
accession:NP_037448.2
CCR4-NOT transcription complex subunit 4 isoform c [Homo sapiens] >ref|XP_005550912.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca fascicularis] >ref|XP_007981213.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Chlorocebus sabaeus] >ref|XP_011722077.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca nemestrina] >ref|XP_011855513.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Mandrillus leucophaeus] >ref|XP_011923610.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Cercocebus atys] >ref|XP_014990461.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca mulatta] >ref|XP_017743235.1| PREDICTED: CCR4-NOT transcription complex subunit 4 isoform X3 [Rhinopithecus bieti] >ref|XP_030788363.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Rhinopithecus roxellana] >ref|XP_030868936.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Gorilla gorilla gorilla] >ref|XP_033050629.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Trachypithecus francoisi] >ref|XP_047276369.1| CCR4-NOT transcription complex subunit 4 isoform X2 [Homo sapiens] >ref|XP_050638363.1| CCR4-NOT transcription complex subunit 4 isoform X3 [Macaca thibetana thibetana] >ref|XP_054214244.1| CCR4-NOT transcription complex subunit 4 isoform X2 [Homo sapiens] >gb|EAW83850.1| CCR4-NOT transcription complex, subunit 4, isoform CRA_b [Homo sapiens] >gb|EAW83851.1| CCR4-NOT transcription complex, subunit 4, isoform CRA_b [Homo sapiens] >gb|KAI2548012.1| CCR4-NOT transcription complex subunit 4 [Homo sapiens] >gb|KAI4015935.1| CCR4-NOT transcription complex subunit 4 [Homo sapiens]
642 aa protein
accession:NP_001177776.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1309 | 1309 | 100% | 0.0 | 99.38% | NP_001177776.1 | |
2 | 1297 | 1297 | 100% | 0.0 | 98.44% | NP_001157884.1 | |
3 | 783 | 919 | 100% | 0.0 | 65.40% | NP_957463.1 | |
4 | 405 | 444 | 44% | 1e-127 | 71.60% | NP_001188776.1 | |
5 | 319 | 319 | 36% | 2e-97 | 60.09% | NP_001294150.1 |