Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001008792.1
whirlin isoform 3 [Mus musculus] >gb|AAV87521.1| whirlin isoform 3 [Mus musculus]
...
Query length:
911 aa
DOMAINS: and other(s) domains
...
dyschronic, isoform J hronic, isoform J [Drosophila melanogaster]
...
dyschronic, isoform J [Drosophila melanogaster] >gb|AGB94506.1| dyschronic, isoform J [Drosophila melanogaster]
982 aa protein
accession:NP_001261813.1
whirlin isoform X1
...
whirlin isoform X1 [Danio rerio]
939 aa protein
accession:XP_002665968.3
whirlin isoform 1 7.1| whirlin isoform X3 [Homo sapiens] >sp|Q9P202.4| RecName: Full=Whirlin; AltName: Full=Autosomal recessive deafness type 31 protein [Homo sapiens] >dbj|BAI45560.1| deafness, autosomal recessive 31, partial [synthetic construct] >gb|AAI42615.1| Deafness, autosomal recessive 31 [Homo sapiens] >gb|EAW87422.1| deafness, autosomal recessive 31, isoform CRA_c [Homo sapiens] >gb|KAI4008179.1| whirlin [Homo sapiens] >dbj|BAA96050.2| KIAA1526 protein [Homo sapiens]
...
whirlin isoform 1 [Homo sapiens] >ref|XP_047279117.1| whirlin isoform X3 [Homo sapiens] >sp|Q9P202.4| RecName: Full=Whirlin; AltName: Full=Autosomal recessive deafness type 31 protein [Homo sapiens] >dbj|BAI45560.1| deafness, autosomal recessive 31, partial [synthetic construct] >gb|AAI42615.1| Deafness, autosomal recessive 31 [Homo sapiens] >gb|EAW87422.1| deafness, autosomal recessive 31, isoform CRA_c [Homo sapiens] >gb|KAI4008179.1| whirlin [Homo sapiens] >dbj|BAA96050.2| KIAA1526 protein [Homo sapiens]
907 aa protein
accession:NP_056219.3
whirlin isoform 4 whirlin isoform 4 [Mus musculus]
...
whirlin isoform 4 [Mus musculus] >gb|AAV87522.1| whirlin isoform 4 [Mus musculus]
906 aa protein
accession:NP_001008793.1
Query: whirlin isoform 3 whirlin isoform 3 [Mus musculus]
...
whirlin isoform 3 [Mus musculus] >gb|AAV87521.1| whirlin isoform 3 [Mus musculus]
911 aa protein
accession:NP_001008792.1
whirlin isoform 1 whirlin isoform 1 [Mus musculus]
...
whirlin isoform 1 [Mus musculus] >gb|AAV87519.1| whirlin isoform 1 [Mus musculus]
907 aa protein
accession:NP_082916.1
DOMAINS: and other(s) domains
...
dyschronic, isoform J [Drosophila melanogaster] >gb|AGB94506.1| dyschronic, isoform J [Drosophila melanogaster]
982 aa protein
accession:NP_001261813.1
whirlin isoform X1 [Danio rerio]
939 aa protein
accession:XP_002665968.3
whirlin isoform 1 [Homo sapiens] >ref|XP_047279117.1| whirlin isoform X3 [Homo sapiens] >sp|Q9P202.4| RecName: Full=Whirlin; AltName: Full=Autosomal recessive deafness type 31 protein [Homo sapiens] >dbj|BAI45560.1| deafness, autosomal recessive 31, partial [synthetic construct] >gb|AAI42615.1| Deafness, autosomal recessive 31 [Homo sapiens] >gb|EAW87422.1| deafness, autosomal recessive 31, isoform CRA_c [Homo sapiens] >gb|KAI4008179.1| whirlin [Homo sapiens] >dbj|BAA96050.2| KIAA1526 protein [Homo sapiens]
907 aa protein
accession:NP_056219.3
whirlin isoform 4 [Mus musculus] >gb|AAV87522.1| whirlin isoform 4 [Mus musculus]
906 aa protein
accession:NP_001008793.1
whirlin isoform 3 [Mus musculus] >gb|AAV87521.1| whirlin isoform 3 [Mus musculus]
911 aa protein
accession:NP_001008792.1
whirlin isoform 1 [Mus musculus] >gb|AAV87519.1| whirlin isoform 1 [Mus musculus]
907 aa protein
accession:NP_082916.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1821 | 1821 | 100% | 0.0 | 99.56% | NP_082916.1 | |
2 | 1533 | 1533 | 95% | 0.0 | 87.77% | NP_056219.3 | |
3 | 954 | 954 | 96% | 0.0 | 58.24% | XP_002665968.3 | |
4 | 213 | 310 | 49% | 8e-56 | 31.62% | NP_001261813.1 | |
5 | 1814 | 1814 | 100% | 0.0 | 99.45% | NP_001008793.1 |