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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_001011723.1 MHC class II DR alpha chain precursor [Canis lupus familiaris] >ref|XP_025274140.1| HLA class II histocompatibility antigen, DR alpha chain [Canis lupus dingo] >ref|XP_025274141.1| HLA class II histocompatibility antigen, DR alpha chain [Canis lupus dingo] >ref|XP_038538669.1| MHC class II DR alpha chain isoform X1 [Canis lupus familiaris] >ref|XP_038538670.1| MHC class II DR alpha chain isoform X1 [Canis lupus familiaris] >gb|AAA99463.1| MHC class II DR alpha chain [Canis lupus familiaris] >emb|CAH61722.1| MHC class II antigen DR alpha [Canis lupus familiaris] ... Query length: 254 aa
uncharacterized protein LOC641415 isoform 1 precursor ...
uncharacterized protein LOC641415 isoform 1 precursor [Danio rerio] >gb|AAI29307.1| Zgc:123107 protein [Danio rerio]
256 aa protein
accession:NP_001032481.2
histocompatibility 2, class II antigen A, alpha precursor ity antigen, A-B alpha chain; Short=IAalpha; Flags: Precursor [Mus musculus] >gb|AAB81529.1| IAalpha subunit [Mus musculus] >gb|AAC05285.1| major histocompatibility protein class II alpha chain [Mus musculus] >gb|AAH19721.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|AAH31711.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|EDL10267.1| histocompatibility 2, class II antigen A, alpha [Mus musculus] ...
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus] >sp|P14434.2| RecName: Full=H-2 class II histocompatibility antigen, A-B alpha chain; Short=IAalpha; Flags: Precursor [Mus musculus] >gb|AAB81529.1| IAalpha subunit [Mus musculus] >gb|AAC05285.1| major histocompatibility protein class II alpha chain [Mus musculus] >gb|AAH19721.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|AAH31711.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|EDL10267.1| histocompatibility 2, class II antigen A, alpha [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 >gb|AAA59759.1| MHC class II HLA-DQ-alpha [Homo sapiens] >gb|AAI57866.1| Similar to HLA class II histocompatibility antigen, DQ(1) alpha chain precursor (DC-4 alpha chain) [Homo sapiens] >gb|AAU87987.1| MHC class II antigen [Homo sapiens] >gb|AHW47921.1| MHC class II antigen [Homo sapiens] ...
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens] >gb|AAA59756.1| MHC HLA-DQ alpha precursor, partial [Homo sapiens] >gb|AAA59759.1| MHC class II HLA-DQ-alpha [Homo sapiens] >gb|AAI57866.1| Similar to HLA class II histocompatibility antigen, DQ(1) alpha chain precursor (DC-4 alpha chain) [Homo sapiens] >gb|AAU87987.1| MHC class II antigen [Homo sapiens] >gb|AHW47921.1| MHC class II antigen [Homo sapiens]
255 aa protein
accession:XP_054187296.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor lpha 1 chain precursor [Homo sapiens] >ref|NP_001391949.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_291032.2| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >sp|P20036.1| RecName: Full=HLA class II histocompatibility antigen, DP alpha 1 chain; AltName: Full=DP(W3); AltName: Full=DP(W4); AltName: Full=HLA-SB alpha chain; AltName: Full=MHC class II DP3-alpha; AltName: Full=MHC class II DPA1; Flags: Precursor [Homo sapiens] >gb|AAA63220.1| MHC class II DP3-alpha [Homo sapiens] >gb|AHW47949.1| MHC class II antigen [Homo sapiens] >gb|AHW47983.1| MHC class II antigen [Homo sapiens] >gb|AML03230.1| MHC class II antigen [Homo sapiens] >gb|AML03232.1| MHC class II antigen [Homo sapiens] ...
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001229454.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001391949.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_291032.2| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >sp|P20036.1| RecName: Full=HLA class II histocompatibility antigen, DP alpha 1 chain; AltName: Full=DP(W3); AltName: Full=DP(W4); AltName: Full=HLA-SB alpha chain; AltName: Full=MHC class II DP3-alpha; AltName: Full=MHC class II DPA1; Flags: Precursor [Homo sapiens] >gb|AAA63220.1| MHC class II DP3-alpha [Homo sapiens] >gb|AHW47949.1| MHC class II antigen [Homo sapiens] >gb|AHW47983.1| MHC class II antigen [Homo sapiens] >gb|AML03230.1| MHC class II antigen [Homo sapiens] >gb|AML03232.1| MHC class II antigen [Homo sapiens]
260 aa protein
accession:NP_001229453.1
Query: MHC class II DR alpha chain precursor stocompatibility antigen, DR alpha chain [Canis lupus dingo] >ref|XP_025274141.1| HLA class II histocompatibility antigen, DR alpha chain [Canis lupus dingo] >ref|XP_038538669.1| MHC class II DR alpha chain isoform X1 [Canis lupus familiaris] >ref|XP_038538670.1| MHC class II DR alpha chain isoform X1 [Canis lupus familiaris] >gb|AAA99463.1| MHC class II DR alpha chain [Canis lupus familiaris] >emb|CAH61722.1| MHC class II antigen DR alpha [Canis lupus familiaris] ...
MHC class II DR alpha chain precursor [Canis lupus familiaris] >ref|XP_025274140.1| HLA class II histocompatibility antigen, DR alpha chain [Canis lupus dingo] >ref|XP_025274141.1| HLA class II histocompatibility antigen, DR alpha chain [Canis lupus dingo] >ref|XP_038538669.1| MHC class II DR alpha chain isoform X1 [Canis lupus familiaris] >ref|XP_038538670.1| MHC class II DR alpha chain isoform X1 [Canis lupus familiaris] >gb|AAA99463.1| MHC class II DR alpha chain [Canis lupus familiaris] >emb|CAH61722.1| MHC class II antigen DR alpha [Canis lupus familiaris]
254 aa protein
accession:NP_001011723.1
HLA class II histocompatibility antigen, DR alpha chain precursor gen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor [Homo sapiens] >gb|ABM82521.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >emb|SJX31390.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59783.1| cell surface glycoprotein [Homo sapiens] >gb|AAH32350.1| Major histocompatibility complex, class II, DR alpha [Homo sapiens] >gb|ABM85715.1| major histocompatibility complex, class II, DR alpha, partial [synthetic construct] ...
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens] >sp|P01903.2| RecName: Full=HLA class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor [Homo sapiens] >gb|ABM82521.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >emb|SJX31390.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59783.1| cell surface glycoprotein [Homo sapiens] >gb|AAH32350.1| Major histocompatibility complex, class II, DR alpha [Homo sapiens] >gb|ABM85715.1| major histocompatibility complex, class II, DR alpha, partial [synthetic construct]
254 aa protein
accession:NP_061984.2

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens] >sp|P01903.2| RecName: Full=HLA class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor [Homo sapiens] >gb|ABM82521.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >emb|SJX31390.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59783.1| cell surface glycoprotein [Homo sapiens] >gb|AAH32350.1| Major histocompatibility complex, class II, DR alpha [Homo sapiens] >gb|ABM85715.1| major histocompatibility complex, class II, DR alpha, partial [synthetic construct]
439 439 100% 4e-15787.01% NP_061984.2
2
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus] >sp|P14434.2| RecName: Full=H-2 class II histocompatibility antigen, A-B alpha chain; Short=IAalpha; Flags: Precursor [Mus musculus] >gb|AAB81529.1| IAalpha subunit [Mus musculus] >gb|AAC05285.1| major histocompatibility protein class II alpha chain [Mus musculus] >gb|AAH19721.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|AAH31711.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|EDL10267.1| histocompatibility 2, class II antigen A, alpha [Mus musculus]
275 275 97% 3e-9254.84% NP_034508.2
3
uncharacterized protein LOC641415 isoform 1 precursor [Danio rerio] >gb|AAI29307.1| Zgc:123107 protein [Danio rerio]
114 114 78% 3e-2937.25% NP_001032481.2
4
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001229454.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001391949.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_291032.2| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >sp|P20036.1| RecName: Full=HLA class II histocompatibility antigen, DP alpha 1 chain; AltName: Full=DP(W3); AltName: Full=DP(W4); AltName: Full=HLA-SB alpha chain; AltName: Full=MHC class II DP3-alpha; AltName: Full=MHC class II DPA1; Flags: Precursor [Homo sapiens] >gb|AAA63220.1| MHC class II DP3-alpha [Homo sapiens] >gb|AHW47949.1| MHC class II antigen [Homo sapiens] >gb|AHW47983.1| MHC class II antigen [Homo sapiens] >gb|AML03230.1| MHC class II antigen [Homo sapiens] >gb|AML03232.1| MHC class II antigen [Homo sapiens]
293 293 90% 2e-9964.35% NP_001229453.1
5
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens] >gb|AAA59756.1| MHC HLA-DQ alpha precursor, partial [Homo sapiens] >gb|AAA59759.1| MHC class II HLA-DQ-alpha [Homo sapiens] >gb|AAI57866.1| Similar to HLA class II histocompatibility antigen, DQ(1) alpha chain precursor (DC-4 alpha chain) [Homo sapiens] >gb|AAU87987.1| MHC class II antigen [Homo sapiens] >gb|AHW47921.1| MHC class II antigen [Homo sapiens]
289 289 100% 7e-9856.08% XP_054187296.1