Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_035511.2
homeobox protein SIX3 [Mus musculus] >sp|Q62233.2| RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis homeobox homolog 3 [Mus musculus] >gb|AAH98096.1| Sine oculis-related homeobox 3 homolog (Drosophila) [Mus musculus]
...
Query length:
333 aa
DOMAINS: and other(s) domains
...
Homeobox protein ceh-32 Full=Homeobox protein ceh-32 [Caenorhabditis elegans] >gb|AAG49583.1| CEH-32 [Caenorhabditis elegans] >emb|CAB01249.2| Homeobox protein ceh-32 [Caenorhabditis elegans]
...
Homeobox protein ceh-32 [Caenorhabditis elegans] >sp|Q23175.2| RecName: Full=Homeobox protein ceh-32 [Caenorhabditis elegans] >gb|AAG49583.1| CEH-32 [Caenorhabditis elegans] >emb|CAB01249.2| Homeobox protein ceh-32 [Caenorhabditis elegans]
439 aa protein
accession:NP_505958.1
homeobox protein SIX3a box protein Six3 [Danio rerio]
...
homeobox protein SIX3a [Danio rerio] >gb|AAC27448.1| homeobox protein Six3 [Danio rerio]
294 aa protein
accession:NP_571437.1
optix, isoform A ecName: Full=Protein Optix; AltName: Full=Homeobox protein SIX3; Short=D-Six3 [Drosophila melanogaster] >gb|ACL84179.1| Optix-PA, partial [synthetic construct] >gb|AAF59147.3| optix, isoform A [Drosophila melanogaster] >gb|AAL28625.1| LD05472p [Drosophila melanogaster] >gb|ACL89268.1| Optix-PA [synthetic construct] >gb|AOQ07298.1| Optix-RA, partial [synthetic construct]
...
optix, isoform A [Drosophila melanogaster] >sp|Q95RW8.1| RecName: Full=Protein Optix; AltName: Full=Homeobox protein SIX3; Short=D-Six3 [Drosophila melanogaster] >gb|ACL84179.1| Optix-PA, partial [synthetic construct] >gb|AAF59147.3| optix, isoform A [Drosophila melanogaster] >gb|AAL28625.1| LD05472p [Drosophila melanogaster] >gb|ACL89268.1| Optix-PA [synthetic construct] >gb|AOQ07298.1| Optix-RA, partial [synthetic construct]
487 aa protein
accession:NP_524695.2
homeobox protein SIX3 homeobox protein SIX3 [Rhinopithecus roxellana] >ref|XP_017718187.1| PREDICTED: homeobox protein SIX3 [Rhinopithecus bieti] >sp|O95343.1| RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis homeobox homolog 3 [Homo sapiens] >gb|AAI53027.1| SIX homeobox 3 [synthetic construct] >gb|AAD11939.1| homeobox protein Six3 [Homo sapiens] >gb|AAD15753.1| Six3 [Homo sapiens] >gb|AAD51091.1| SIX3 protein [Homo sapiens] >gb|AAX93283.1| unknown [Homo sapiens]
...
homeobox protein SIX3 [Homo sapiens] >ref|XP_010354826.1| homeobox protein SIX3 [Rhinopithecus roxellana] >ref|XP_017718187.1| PREDICTED: homeobox protein SIX3 [Rhinopithecus bieti] >sp|O95343.1| RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis homeobox homolog 3 [Homo sapiens] >gb|AAI53027.1| SIX homeobox 3 [synthetic construct] >gb|AAD11939.1| homeobox protein Six3 [Homo sapiens] >gb|AAD15753.1| Six3 [Homo sapiens] >gb|AAD51091.1| SIX3 protein [Homo sapiens] >gb|AAX93283.1| unknown [Homo sapiens]
332 aa protein
accession:NP_005404.1
Query: homeobox protein SIX3 e: Full=Homeobox protein SIX3; AltName: Full=Sine oculis homeobox homolog 3 [Mus musculus] >gb|AAH98096.1| Sine oculis-related homeobox 3 homolog (Drosophila) [Mus musculus]
...
homeobox protein SIX3 [Mus musculus] >sp|Q62233.2| RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis homeobox homolog 3 [Mus musculus] >gb|AAH98096.1| Sine oculis-related homeobox 3 homolog (Drosophila) [Mus musculus]
333 aa protein
accession:NP_035511.2
homeobox protein SIX3 isoform X1
...
homeobox protein SIX3 isoform X1 [Mus musculus]
354 aa protein
accession:XP_017172856.1
DOMAINS: and other(s) domains
...
Homeobox protein ceh-32 [Caenorhabditis elegans] >sp|Q23175.2| RecName: Full=Homeobox protein ceh-32 [Caenorhabditis elegans] >gb|AAG49583.1| CEH-32 [Caenorhabditis elegans] >emb|CAB01249.2| Homeobox protein ceh-32 [Caenorhabditis elegans]
439 aa protein
accession:NP_505958.1
homeobox protein SIX3a [Danio rerio] >gb|AAC27448.1| homeobox protein Six3 [Danio rerio]
294 aa protein
accession:NP_571437.1
optix, isoform A [Drosophila melanogaster] >sp|Q95RW8.1| RecName: Full=Protein Optix; AltName: Full=Homeobox protein SIX3; Short=D-Six3 [Drosophila melanogaster] >gb|ACL84179.1| Optix-PA, partial [synthetic construct] >gb|AAF59147.3| optix, isoform A [Drosophila melanogaster] >gb|AAL28625.1| LD05472p [Drosophila melanogaster] >gb|ACL89268.1| Optix-PA [synthetic construct] >gb|AOQ07298.1| Optix-RA, partial [synthetic construct]
487 aa protein
accession:NP_524695.2
homeobox protein SIX3 [Homo sapiens] >ref|XP_010354826.1| homeobox protein SIX3 [Rhinopithecus roxellana] >ref|XP_017718187.1| PREDICTED: homeobox protein SIX3 [Rhinopithecus bieti] >sp|O95343.1| RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis homeobox homolog 3 [Homo sapiens] >gb|AAI53027.1| SIX homeobox 3 [synthetic construct] >gb|AAD11939.1| homeobox protein Six3 [Homo sapiens] >gb|AAD15753.1| Six3 [Homo sapiens] >gb|AAD51091.1| SIX3 protein [Homo sapiens] >gb|AAX93283.1| unknown [Homo sapiens]
332 aa protein
accession:NP_005404.1
homeobox protein SIX3 [Mus musculus] >sp|Q62233.2| RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis homeobox homolog 3 [Mus musculus] >gb|AAH98096.1| Sine oculis-related homeobox 3 homolog (Drosophila) [Mus musculus]
333 aa protein
accession:NP_035511.2
homeobox protein SIX3 isoform X1 [Mus musculus]
354 aa protein
accession:XP_017172856.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 682 | 682 | 100% | 0.0 | 100.00% | XP_017172856.1 | |
2 | 658 | 658 | 100% | 0.0 | 97.30% | NP_005404.1 | |
3 | 521 | 521 | 100% | 0.0 | 81.38% | NP_571437.1 | |
4 | 314 | 314 | 58% | 4e-103 | 80.41% | NP_524695.2 | |
5 | 246 | 246 | 66% | 2e-77 | 58.04% | NP_505958.1 |