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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_001012695.1 major histocompatibility complex, class II, DR alpha precursor [Bos taurus] >ref|XP_005910934.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain isoform X1 [Bos mutus] >ref|XP_010843572.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain [Bison bison bison] >ref|XP_014338853.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain isoform X1 [Bos mutus] >ref|XP_027380237.1| HLA class II histocompatibility antigen, DR alpha chain [Bos indicus x Bos taurus] >gb|AHM09958.1| MHC class II antigen [Bos frontalis] >gb|AAI42120.1| Major histocompatibility complex, class II, DR alpha [Bos taurus] >gb|AAX09076.1| major histocompatibility complex, class II, DR alpha precursor [Bos taurus] >gb|MXQ97809.1| hypothetical protein [Bos mutus] >emb|CAA55117.1| MHC class II DR-ALPHA [Bos taurus] ... Query length: 253 aa
uncharacterized protein LOC368614 precursor MHC class II alpha chain [Danio rerio] ...
uncharacterized protein LOC368614 precursor [Danio rerio] >emb|CAD19194.1| novel protein similar to MHC class II alpha chain [Danio rerio]
236 aa protein
accession:NP_001007206.1
histocompatibility 2, class II antigen A, alpha precursor ity antigen, A-B alpha chain; Short=IAalpha; Flags: Precursor [Mus musculus] >gb|AAB81529.1| IAalpha subunit [Mus musculus] >gb|AAC05285.1| major histocompatibility protein class II alpha chain [Mus musculus] >gb|AAH19721.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|AAH31711.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|EDL10267.1| histocompatibility 2, class II antigen A, alpha [Mus musculus] ...
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus] >sp|P14434.2| RecName: Full=H-2 class II histocompatibility antigen, A-B alpha chain; Short=IAalpha; Flags: Precursor [Mus musculus] >gb|AAB81529.1| IAalpha subunit [Mus musculus] >gb|AAC05285.1| major histocompatibility protein class II alpha chain [Mus musculus] >gb|AAH19721.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|AAH31711.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|EDL10267.1| histocompatibility 2, class II antigen A, alpha [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DO alpha chain precursor gen, DO alpha chain; AltName: Full=MHC DN-alpha; AltName: Full=MHC DZ alpha; AltName: Full=MHC class II antigen DOA; Flags: Precursor [Homo sapiens] >gb|ABM81974.1| major histocompatibility complex, class II, DO alpha [synthetic construct] >emb|SJX38660.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59716.1| MHC DN alpha protein precursor [Homo sapiens] >gb|AAA60075.1| MHC HLA-DNA precursor [Homo sapiens] >gb|AAH13183.1| Major histocompatibility complex, class II, DO alpha [Homo sapiens] ...
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens] >sp|P06340.1| RecName: Full=HLA class II histocompatibility antigen, DO alpha chain; AltName: Full=MHC DN-alpha; AltName: Full=MHC DZ alpha; AltName: Full=MHC class II antigen DOA; Flags: Precursor [Homo sapiens] >gb|ABM81974.1| major histocompatibility complex, class II, DO alpha [synthetic construct] >emb|SJX38660.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59716.1| MHC DN alpha protein precursor [Homo sapiens] >gb|AAA60075.1| MHC HLA-DNA precursor [Homo sapiens] >gb|AAH13183.1| Major histocompatibility complex, class II, DO alpha [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor lpha 1 chain precursor [Homo sapiens] >ref|NP_001391949.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_291032.2| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >sp|P20036.1| RecName: Full=HLA class II histocompatibility antigen, DP alpha 1 chain; AltName: Full=DP(W3); AltName: Full=DP(W4); AltName: Full=HLA-SB alpha chain; AltName: Full=MHC class II DP3-alpha; AltName: Full=MHC class II DPA1; Flags: Precursor [Homo sapiens] >gb|AAA63220.1| MHC class II DP3-alpha [Homo sapiens] >gb|AHW47949.1| MHC class II antigen [Homo sapiens] >gb|AHW47983.1| MHC class II antigen [Homo sapiens] >gb|AML03230.1| MHC class II antigen [Homo sapiens] >gb|AML03232.1| MHC class II antigen [Homo sapiens] ...
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001229454.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001391949.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_291032.2| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >sp|P20036.1| RecName: Full=HLA class II histocompatibility antigen, DP alpha 1 chain; AltName: Full=DP(W3); AltName: Full=DP(W4); AltName: Full=HLA-SB alpha chain; AltName: Full=MHC class II DP3-alpha; AltName: Full=MHC class II DPA1; Flags: Precursor [Homo sapiens] >gb|AAA63220.1| MHC class II DP3-alpha [Homo sapiens] >gb|AHW47949.1| MHC class II antigen [Homo sapiens] >gb|AHW47983.1| MHC class II antigen [Homo sapiens] >gb|AML03230.1| MHC class II antigen [Homo sapiens] >gb|AML03232.1| MHC class II antigen [Homo sapiens]
260 aa protein
accession:NP_001229453.1
Query: major histocompatibility complex, class II, DR alpha precursor ty antigen, DR alpha chain isoform X1 [Bos mutus] >ref|XP_010843572.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain [Bison bison bison] >ref|XP_014338853.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain isoform X1 [Bos mutus] >ref|XP_027380237.1| HLA class II histocompatibility antigen, DR alpha chain [Bos indicus x Bos taurus] >gb|AHM09958.1| MHC class II antigen [Bos frontalis] >gb|AAI42120.1| Major histocompatibility complex, class II, DR alpha [Bos taurus] >gb|AAX09076.1| major histocompatibility complex, class II, DR alpha precursor [Bos taurus] >gb|MXQ97809.1| hypothetical protein [Bos mutus] >emb|CAA55117.1| MHC class II DR-ALPHA [Bos taurus] ...
major histocompatibility complex, class II, DR alpha precursor [Bos taurus] >ref|XP_005910934.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain isoform X1 [Bos mutus] >ref|XP_010843572.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain [Bison bison bison] >ref|XP_014338853.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain isoform X1 [Bos mutus] >ref|XP_027380237.1| HLA class II histocompatibility antigen, DR alpha chain [Bos indicus x Bos taurus] >gb|AHM09958.1| MHC class II antigen [Bos frontalis] >gb|AAI42120.1| Major histocompatibility complex, class II, DR alpha [Bos taurus] >gb|AAX09076.1| major histocompatibility complex, class II, DR alpha precursor [Bos taurus] >gb|MXQ97809.1| hypothetical protein [Bos mutus] >emb|CAA55117.1| MHC class II DR-ALPHA [Bos taurus]
253 aa protein
accession:NP_001012695.1
HLA class II histocompatibility antigen, DR alpha chain precursor gen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor [Homo sapiens] >gb|ABM82521.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >emb|SJX31390.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59783.1| cell surface glycoprotein [Homo sapiens] >gb|AAH32350.1| Major histocompatibility complex, class II, DR alpha [Homo sapiens] >gb|ABM85715.1| major histocompatibility complex, class II, DR alpha, partial [synthetic construct] ...
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens] >sp|P01903.2| RecName: Full=HLA class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor [Homo sapiens] >gb|ABM82521.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >emb|SJX31390.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59783.1| cell surface glycoprotein [Homo sapiens] >gb|AAH32350.1| Major histocompatibility complex, class II, DR alpha [Homo sapiens] >gb|ABM85715.1| major histocompatibility complex, class II, DR alpha, partial [synthetic construct]
254 aa protein
accession:NP_061984.2

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens] >sp|P01903.2| RecName: Full=HLA class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor [Homo sapiens] >gb|ABM82521.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >emb|SJX31390.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59783.1| cell surface glycoprotein [Homo sapiens] >gb|AAH32350.1| Major histocompatibility complex, class II, DR alpha [Homo sapiens] >gb|ABM85715.1| major histocompatibility complex, class II, DR alpha, partial [synthetic construct]
402 402 100% 2e-14280.71% NP_061984.2
2
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus] >sp|P14434.2| RecName: Full=H-2 class II histocompatibility antigen, A-B alpha chain; Short=IAalpha; Flags: Precursor [Mus musculus] >gb|AAB81529.1| IAalpha subunit [Mus musculus] >gb|AAC05285.1| major histocompatibility protein class II alpha chain [Mus musculus] >gb|AAH19721.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|AAH31711.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gb|EDL10267.1| histocompatibility 2, class II antigen A, alpha [Mus musculus]
280 280 100% 5e-9453.91% NP_034508.2
3
uncharacterized protein LOC368614 precursor [Danio rerio] >emb|CAD19194.1| novel protein similar to MHC class II alpha chain [Danio rerio]
119 119 91% 2e-3131.22% NP_001007206.1
4
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001229454.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_001391949.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >ref|NP_291032.2| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >sp|P20036.1| RecName: Full=HLA class II histocompatibility antigen, DP alpha 1 chain; AltName: Full=DP(W3); AltName: Full=DP(W4); AltName: Full=HLA-SB alpha chain; AltName: Full=MHC class II DP3-alpha; AltName: Full=MHC class II DPA1; Flags: Precursor [Homo sapiens] >gb|AAA63220.1| MHC class II DP3-alpha [Homo sapiens] >gb|AHW47949.1| MHC class II antigen [Homo sapiens] >gb|AHW47983.1| MHC class II antigen [Homo sapiens] >gb|AML03230.1| MHC class II antigen [Homo sapiens] >gb|AML03232.1| MHC class II antigen [Homo sapiens]
274 274 90% 1e-9158.70% NP_001229453.1
5
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens] >sp|P06340.1| RecName: Full=HLA class II histocompatibility antigen, DO alpha chain; AltName: Full=MHC DN-alpha; AltName: Full=MHC DZ alpha; AltName: Full=MHC class II antigen DOA; Flags: Precursor [Homo sapiens] >gb|ABM81974.1| major histocompatibility complex, class II, DO alpha [synthetic construct] >emb|SJX38660.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAA59716.1| MHC DN alpha protein precursor [Homo sapiens] >gb|AAA60075.1| MHC HLA-DNA precursor [Homo sapiens] >gb|AAH13183.1| Major histocompatibility complex, class II, DO alpha [Homo sapiens]
270 270 94% 4e-9052.89% NP_002110.1