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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_080854.1 H/ACA ribonucleoprotein complex subunit 1 [Mus musculus] ... Query length: 231 aa
Query: H/ACA snoRNP pseudouridylase subunit GAR1 cleoprotein complex subunit GAR1; AltName: Full=Glycine/arginine-rich protein 1; AltName: Full=snoRNP protein GAR1 [Saccharomyces cerevisiae S288C] >gb|AAB68929.1| Gar1p: Small nucleolar RNA protein required for pre-rRNA splicing [Saccharomyces cerevisiae] >gb|AJU16905.1| Gar1p [Saccharomyces cerevisiae YJM1383] >gb|AJU17158.1| Gar1p [Saccharomyces cerevisiae YJM1385] >gb|AJU17413.1| Gar1p [Saccharomyces cerevisiae YJM1386] >gb|AJU21920.1| Gar1p [Saccharomyces cerevisiae YJM1450] >gb|AJU25495.1| Gar1p [Saccharomyces cerevisiae YJM1615] >gb|AJU27693.1| Gar1p [Saccharomyces cerevisiae YJM320] >gb|AJU27946.1| Gar1p [Saccharomyces cerevisiae YJM326] >gb|AJU28195.1| Gar1p [Saccharomyces cerevisiae YJM428] >gb|AJU28452.1| Gar1p [Saccharomyces cerevisiae YJM450] >gb|AJU29220.1| Gar1p [Saccharomyces cerevisiae YJM456] >gb|AJU29965.1| Gar1p [Saccharomyces cerevisiae YJM554] >gb|AJU30975.1| Gar1p [Saccharomyces cerevisiae YJM682] >gb|AJU31229.1| Gar1p [Saccharomyces cerevisiae YJM683] >gb|AJU31740.1| Gar1p [Saccharomyces cerevisiae YJM693] >gb|AJV28576.1| Gar1p [Saccharomyces cerevisiae YJM1208] >gb|AJV30337.1| Gar1p [Saccharomyces cerevisiae YJM1304] >gb|AJV32625.1| Gar1p [Saccharomyces cerevisiae YJM1355] >gb|EDN62330.1| small nucleolar RNP protein [Saccharomyces cerevisiae YJM789] >gb|WNM97019.1| GAR1 [Saccharomyces cerevisiae synthetic construct] ...
H/ACA snoRNP pseudouridylase subunit GAR1 [Saccharomyces cerevisiae S288C] >sp|P28007.1| RecName: Full=H/ACA ribonucleoprotein complex subunit GAR1; AltName: Full=Glycine/arginine-rich protein 1; AltName: Full=snoRNP protein GAR1 [Saccharomyces cerevisiae S288C] >gb|AAB68929.1| Gar1p: Small nucleolar RNA protein required for pre-rRNA splicing [Saccharomyces cerevisiae] >gb|AJU16905.1| Gar1p [Saccharomyces cerevisiae YJM1383] >gb|AJU17158.1| Gar1p [Saccharomyces cerevisiae YJM1385] >gb|AJU17413.1| Gar1p [Saccharomyces cerevisiae YJM1386] >gb|AJU21920.1| Gar1p [Saccharomyces cerevisiae YJM1450] >gb|AJU25495.1| Gar1p [Saccharomyces cerevisiae YJM1615] >gb|AJU27693.1| Gar1p [Saccharomyces cerevisiae YJM320] >gb|AJU27946.1| Gar1p [Saccharomyces cerevisiae YJM326] >gb|AJU28195.1| Gar1p [Saccharomyces cerevisiae YJM428] >gb|AJU28452.1| Gar1p [Saccharomyces cerevisiae YJM450] >gb|AJU29220.1| Gar1p [Saccharomyces cerevisiae YJM456] >gb|AJU29965.1| Gar1p [Saccharomyces cerevisiae YJM554] >gb|AJU30975.1| Gar1p [Saccharomyces cerevisiae YJM682] >gb|AJU31229.1| Gar1p [Saccharomyces cerevisiae YJM683] >gb|AJU31740.1| Gar1p [Saccharomyces cerevisiae YJM693] >gb|AJV28576.1| Gar1p [Saccharomyces cerevisiae YJM1208] >gb|AJV30337.1| Gar1p [Saccharomyces cerevisiae YJM1304] >gb|AJV32625.1| Gar1p [Saccharomyces cerevisiae YJM1355] >gb|EDN62330.1| small nucleolar RNP protein [Saccharomyces cerevisiae YJM789] >gb|WNM97019.1| GAR1 [Saccharomyces cerevisiae synthetic construct]
205 aa protein
accession:NP_011957.1
H/ACA snoRNP pseudouridylase subunit Gar1 cleoprotein complex subunit gar1; AltName: Full=snoRNP protein GAR1 [Schizosaccharomyces pombe 972h-] >dbj|BAA19143.1| snoRNP protein GAR 1 [Schizosaccharomyces pombe] >emb|CAA79628.1| snoRNP protein GAR1 [Schizosaccharomyces pombe] >emb|CAB08787.1| box H/ACA snoRNP complex subunit Gar1 [Schizosaccharomyces pombe] ...
H/ACA snoRNP pseudouridylase subunit Gar1 [Schizosaccharomyces pombe] >sp|Q06975.1| RecName: Full=H/ACA ribonucleoprotein complex subunit gar1; AltName: Full=snoRNP protein GAR1 [Schizosaccharomyces pombe 972h-] >dbj|BAA19143.1| snoRNP protein GAR 1 [Schizosaccharomyces pombe] >emb|CAA79628.1| snoRNP protein GAR1 [Schizosaccharomyces pombe] >emb|CAB08787.1| box H/ACA snoRNP complex subunit Gar1 [Schizosaccharomyces pombe]
194 aa protein
accession:NP_596365.1
putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 bunit 1-like protein 1 [Glycine soja] >gb|KAG4940309.1| hypothetical protein JHK87_044180 [Glycine soja] >gb|KAG4951082.1| hypothetical protein JHK85_044949 [Glycine max] >gb|KAG5100966.1| hypothetical protein JHK82_046018 [Glycine max] >gb|KAH1149907.1| hypothetical protein GYH30_044091 [Glycine max] >gb|KRH06715.1| hypothetical protein GLYMA_16G041400v4 [Glycine max] ...
putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Glycine max] >ref|XP_028206147.1| putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Glycine soja] >gb|KAG4940309.1| hypothetical protein JHK87_044180 [Glycine soja] >gb|KAG4951082.1| hypothetical protein JHK85_044949 [Glycine max] >gb|KAG5100966.1| hypothetical protein JHK82_046018 [Glycine max] >gb|KAH1149907.1| hypothetical protein GYH30_044091 [Glycine max] >gb|KRH06715.1| hypothetical protein GLYMA_16G041400v4 [Glycine max]
195 aa protein
accession:XP_003548749.1
H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein ein complex subunit 1-like protein 1 [Arabidopsis thaliana] >gb|KAG7623924.1| Translation protein beta-barrel domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7629939.1| Translation protein beta-barrel domain superfamily [Arabidopsis suecica] >gb|AAL36230.1| putative GAR1 protein [Arabidopsis thaliana] >gb|AAM14173.1| putative GAR1 protein [Arabidopsis thaliana] >gb|AEE74012.1| H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein [Arabidopsis thaliana] ...
H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein [Arabidopsis thaliana] >sp|Q8VZT0.1| RecName: Full=Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Arabidopsis thaliana] >gb|KAG7623924.1| Translation protein beta-barrel domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7629939.1| Translation protein beta-barrel domain superfamily [Arabidopsis suecica] >gb|AAL36230.1| putative GAR1 protein [Arabidopsis thaliana] >gb|AAM14173.1| putative GAR1 protein [Arabidopsis thaliana] >gb|AEE74012.1| H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein [Arabidopsis thaliana]
202 aa protein
accession:NP_566217.1
H/ACA ribonucleoprotein complex subunit 1 n complex subunit 1 [Homo sapiens] >ref|XP_003899135.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_009205633.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_009205634.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_025241434.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Theropithecus gelada] >ref|XP_025241435.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Theropithecus gelada] >ref|XP_031520219.1| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_047271745.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Homo sapiens] >ref|XP_054206173.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Homo sapiens] >ref|XP_054342509.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >ref|XP_054342510.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >ref|XP_063520041.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >sp|Q9NY12.1| RecName: Full=H/ACA ribonucleoprotein complex subunit 1; AltName: Full=Nucleolar protein family A member 1; AltName: Full=snoRNP protein GAR1 [Homo sapiens] >pdb|7BGB|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7BGB|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7TRC|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7TRC|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7V9A|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7V9A|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUE|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUE|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUF|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUF|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >gb|ABM85083.1| nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), partial [synthetic construct] >emb|SJX30266.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH03413.1| GAR1 ribonucleoprotein homolog (yeast) [Homo sapiens] >gb|ABW03722.1| nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) [synthetic construct] >gb|AIC56534.1| GAR1, partial [synthetic construct] ...
H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >ref|NP_127460.1| H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >ref|XP_003899135.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_009205633.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_009205634.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_025241434.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Theropithecus gelada] >ref|XP_025241435.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Theropithecus gelada] >ref|XP_031520219.1| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_047271745.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Homo sapiens] >ref|XP_054206173.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Homo sapiens] >ref|XP_054342509.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >ref|XP_054342510.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >ref|XP_063520041.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >sp|Q9NY12.1| RecName: Full=H/ACA ribonucleoprotein complex subunit 1; AltName: Full=Nucleolar protein family A member 1; AltName: Full=snoRNP protein GAR1 [Homo sapiens] >pdb|7BGB|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7BGB|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7TRC|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7TRC|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7V9A|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7V9A|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUE|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUE|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUF|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUF|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >gb|ABM85083.1| nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), partial [synthetic construct] >emb|SJX30266.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH03413.1| GAR1 ribonucleoprotein homolog (yeast) [Homo sapiens] >gb|ABW03722.1| nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) [synthetic construct] >gb|AIC56534.1| GAR1, partial [synthetic construct]
217 aa protein
accession:NP_061856.1
Query: H/ACA ribonucleoprotein complex subunit 1 ...
H/ACA ribonucleoprotein complex subunit 1 [Mus musculus]
231 aa protein
accession:NP_080854.1

Descriptions

Best hits

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Alignments Download
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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
H/ACA snoRNP pseudouridylase subunit Gar1 [Schizosaccharomyces pombe] >sp|Q06975.1| RecName: Full=H/ACA ribonucleoprotein complex subunit gar1; AltName: Full=snoRNP protein GAR1 [Schizosaccharomyces pombe 972h-] >dbj|BAA19143.1| snoRNP protein GAR 1 [Schizosaccharomyces pombe] >emb|CAA79628.1| snoRNP protein GAR1 [Schizosaccharomyces pombe] >emb|CAB08787.1| box H/ACA snoRNP complex subunit Gar1 [Schizosaccharomyces pombe]
160 160 50% 7e-4964.42% NP_596365.1
2
putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Glycine max] >ref|XP_028206147.1| putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Glycine soja] >gb|KAG4940309.1| hypothetical protein JHK87_044180 [Glycine soja] >gb|KAG4951082.1| hypothetical protein JHK85_044949 [Glycine max] >gb|KAG5100966.1| hypothetical protein JHK82_046018 [Glycine max] >gb|KAH1149907.1| hypothetical protein GYH30_044091 [Glycine max] >gb|KRH06715.1| hypothetical protein GLYMA_16G041400v4 [Glycine max]
136 136 47% 3e-3959.79% XP_003548749.1
3
H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein [Arabidopsis thaliana] >sp|Q8VZT0.1| RecName: Full=Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Arabidopsis thaliana] >gb|KAG7623924.1| Translation protein beta-barrel domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7629939.1| Translation protein beta-barrel domain superfamily [Arabidopsis suecica] >gb|AAL36230.1| putative GAR1 protein [Arabidopsis thaliana] >gb|AAM14173.1| putative GAR1 protein [Arabidopsis thaliana] >gb|AEE74012.1| H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein [Arabidopsis thaliana]
134 134 47% 4e-3860.82% NP_566217.1
4
H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >ref|NP_127460.1| H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >ref|XP_003899135.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_009205633.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_009205634.2| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_025241434.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Theropithecus gelada] >ref|XP_025241435.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Theropithecus gelada] >ref|XP_031520219.1| H/ACA ribonucleoprotein complex subunit 1 [Papio anubis] >ref|XP_047271745.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Homo sapiens] >ref|XP_054206173.1| H/ACA ribonucleoprotein complex subunit 1 isoform X1 [Homo sapiens] >ref|XP_054342509.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >ref|XP_054342510.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >ref|XP_063520041.1| H/ACA ribonucleoprotein complex subunit 1 [Pongo pygmaeus] >sp|Q9NY12.1| RecName: Full=H/ACA ribonucleoprotein complex subunit 1; AltName: Full=Nucleolar protein family A member 1; AltName: Full=snoRNP protein GAR1 [Homo sapiens] >pdb|7BGB|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7BGB|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7TRC|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7TRC|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7V9A|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|7V9A|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUE|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUE|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUF|D Chain D, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >pdb|8OUF|H Chain H, H/ACA ribonucleoprotein complex subunit 1 [Homo sapiens] >gb|ABM85083.1| nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), partial [synthetic construct] >emb|SJX30266.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH03413.1| GAR1 ribonucleoprotein homolog (yeast) [Homo sapiens] >gb|ABW03722.1| nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) [synthetic construct] >gb|AIC56534.1| GAR1, partial [synthetic construct]
128 128 46% 6e-3657.14% NP_061856.1
5
H/ACA ribonucleoprotein complex subunit 1 [Mus musculus]
127 127 46% 2e-3557.14% NP_080854.1