Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_115820.2
structure-specific endonuclease subunit SLX4 [Homo sapiens] >ref|XP_024306239.1| structure-specific endonuclease subunit SLX4 isoform X1 [Homo sapiens] >ref|XP_054170167.1| structure-specific endonuclease subunit SLX4 isoform X1 [Homo sapiens] >sp|Q8IY92.3| RecName: Full=Structure-specific endonuclease subunit SLX4; AltName: Full=BTB/POZ domain-containing protein 12 [Homo sapiens] >gb|KAI2576827.1| SLX4 structure-specific endonuclease subunit [Homo sapiens] >gb|KAI4053235.1| SLX4 structure-specific endonuclease subunit [Homo sapiens]
...
Query length:
1834 aa
DOMAINS: and other(s) domains
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rho-related BTB domain-containing protein 3 B domain-containing protein 3 [Homo sapiens] >dbj|BAF82723.1| unnamed protein product [Homo sapiens]
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rho-related BTB domain-containing protein 3 [Homo sapiens] >sp|O94955.2| RecName: Full=Rho-related BTB domain-containing protein 3 [Homo sapiens] >dbj|BAF82723.1| unnamed protein product [Homo sapiens]
611 aa protein
accession:NP_055714.3
Rho GTPase 7.2| RecName: Full=Rho-related protein racA [Dictyostelium discoideum] >gb|AAG45115.1| RacA [Dictyostelium discoideum] >gb|EAL64033.1| Rho GTPase [Dictyostelium discoideum AX4]
...
Rho GTPase [Dictyostelium discoideum AX4] >sp|P34147.2| RecName: Full=Rho-related protein racA [Dictyostelium discoideum] >gb|AAG45115.1| RacA [Dictyostelium discoideum] >gb|EAL64033.1| Rho GTPase [Dictyostelium discoideum AX4]
598 aa protein
accession:XP_637561.1
ARMADILLO BTB protein 1 Full=ARMADILLO BTB ARABIDOPSIS PROTEIN 1; Short=ABAP1 [Arabidopsis thaliana] >gb|KAG7602068.1| SKP1/BTB/POZ domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa] >gb|ACJ46331.1| ABAP1 [Arabidopsis thaliana] >gb|AED91846.1| ARMADILLO BTB protein 1 [Arabidopsis thaliana] >emb|CAA0402270.1| unnamed protein product [Arabidopsis thaliana] >emb|VYS66668.1| unnamed protein product [Arabidopsis thaliana]
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ARMADILLO BTB protein 1 [Arabidopsis thaliana] >sp|B7U179.1| RecName: Full=ARMADILLO BTB ARABIDOPSIS PROTEIN 1; Short=ABAP1 [Arabidopsis thaliana] >gb|KAG7602068.1| SKP1/BTB/POZ domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa] >gb|ACJ46331.1| ABAP1 [Arabidopsis thaliana] >gb|AED91846.1| ARMADILLO BTB protein 1 [Arabidopsis thaliana] >emb|CAA0402270.1| unnamed protein product [Arabidopsis thaliana] >emb|VYS66668.1| unnamed protein product [Arabidopsis thaliana]
737 aa protein
accession:NP_196810.5
structure-specific endonuclease subunit SLX4
...
structure-specific endonuclease subunit SLX4 [Danio rerio]
1720 aa protein
accession:XP_003201146.3
Query: structure-specific endonuclease subunit SLX4 onuclease subunit SLX4 isoform X1 [Homo sapiens] >ref|XP_054170167.1| structure-specific endonuclease subunit SLX4 isoform X1 [Homo sapiens] >sp|Q8IY92.3| RecName: Full=Structure-specific endonuclease subunit SLX4; AltName: Full=BTB/POZ domain-containing protein 12 [Homo sapiens] >gb|KAI2576827.1| SLX4 structure-specific endonuclease subunit [Homo sapiens] >gb|KAI4053235.1| SLX4 structure-specific endonuclease subunit [Homo sapiens]
...
structure-specific endonuclease subunit SLX4 [Homo sapiens] >ref|XP_024306239.1| structure-specific endonuclease subunit SLX4 isoform X1 [Homo sapiens] >ref|XP_054170167.1| structure-specific endonuclease subunit SLX4 isoform X1 [Homo sapiens] >sp|Q8IY92.3| RecName: Full=Structure-specific endonuclease subunit SLX4; AltName: Full=BTB/POZ domain-containing protein 12 [Homo sapiens] >gb|KAI2576827.1| SLX4 structure-specific endonuclease subunit [Homo sapiens] >gb|KAI4053235.1| SLX4 structure-specific endonuclease subunit [Homo sapiens]
1834 aa protein
accession:NP_115820.2
structure-specific endonuclease subunit SLX4 isoform X1 ubunit SLX4 isoform X1 [Mus musculus] >ref|XP_030105037.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus] >ref|XP_030105038.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus]
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structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus] >ref|XP_006522413.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus] >ref|XP_030105037.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus] >ref|XP_030105038.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus]
1723 aa protein
accession:XP_006522412.1
DOMAINS: and other(s) domains
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rho-related BTB domain-containing protein 3 [Homo sapiens] >sp|O94955.2| RecName: Full=Rho-related BTB domain-containing protein 3 [Homo sapiens] >dbj|BAF82723.1| unnamed protein product [Homo sapiens]
611 aa protein
accession:NP_055714.3
Rho GTPase [Dictyostelium discoideum AX4] >sp|P34147.2| RecName: Full=Rho-related protein racA [Dictyostelium discoideum] >gb|AAG45115.1| RacA [Dictyostelium discoideum] >gb|EAL64033.1| Rho GTPase [Dictyostelium discoideum AX4]
598 aa protein
accession:XP_637561.1
ARMADILLO BTB protein 1 [Arabidopsis thaliana] >sp|B7U179.1| RecName: Full=ARMADILLO BTB ARABIDOPSIS PROTEIN 1; Short=ABAP1 [Arabidopsis thaliana] >gb|KAG7602068.1| SKP1/BTB/POZ domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa] >gb|ACJ46331.1| ABAP1 [Arabidopsis thaliana] >gb|AED91846.1| ARMADILLO BTB protein 1 [Arabidopsis thaliana] >emb|CAA0402270.1| unnamed protein product [Arabidopsis thaliana] >emb|VYS66668.1| unnamed protein product [Arabidopsis thaliana]
737 aa protein
accession:NP_196810.5
structure-specific endonuclease subunit SLX4 [Danio rerio]
1720 aa protein
accession:XP_003201146.3
structure-specific endonuclease subunit SLX4 [Homo sapiens] >ref|XP_024306239.1| structure-specific endonuclease subunit SLX4 isoform X1 [Homo sapiens] >ref|XP_054170167.1| structure-specific endonuclease subunit SLX4 isoform X1 [Homo sapiens] >sp|Q8IY92.3| RecName: Full=Structure-specific endonuclease subunit SLX4; AltName: Full=BTB/POZ domain-containing protein 12 [Homo sapiens] >gb|KAI2576827.1| SLX4 structure-specific endonuclease subunit [Homo sapiens] >gb|KAI4053235.1| SLX4 structure-specific endonuclease subunit [Homo sapiens]
1834 aa protein
accession:NP_115820.2
structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus] >ref|XP_006522413.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus] >ref|XP_030105037.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus] >ref|XP_030105038.1| structure-specific endonuclease subunit SLX4 isoform X1 [Mus musculus]
1723 aa protein
accession:XP_006522412.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1732 | 1732 | 97% | 0.0 | 58.33% | XP_006522412.1 | |
2 | 345 | 517 | 74% | 7e-95 | 31.36% | XP_003201146.3 | |
3 | 50.4 | 50.4 | 6% | 1e-04 | 33.07% | NP_055714.3 | |
4 | 44.7 | 44.7 | 5% | 0.010 | 30.10% | XP_637561.1 | |
5 | 44.3 | 44.3 | 7% | 0.014 | 25.81% | NP_196810.5 |