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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_031564.1 short-wave-sensitive opsin 1 [Mus musculus] >sp|P51491.1| RecName: Full=Short-wave-sensitive opsin 1; Short=S opsin; AltName: Full=Blue cone photoreceptor pigment; AltName: Full=Blue-sensitive opsin; Short=BOP; AltName: Full=Short wavelength-sensitive cone opsin [Mus musculus] >gb|AAA92458.1| blue cone pigment [Mus musculus] >gb|AAB53320.1| blue cone pigment [Mus musculus] >gb|AAG17989.1| blue opsin [Mus musculus] >gb|AAG17990.1| blue opsin [Mus musculus] >gb|AAH26021.1| Opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) [Mus musculus] ... Query length: 346 aa
green-sensitive opsin-3 Full=Green-sensitive opsin-3; AltName: Full=Green cone photoreceptor pigment 3; AltName: Full=Opsin RH2-3; AltName: Full=Opsin-1, medium-wave-sensitive 3 [Danio rerio] >gb|AAH75989.1| Opsin 1 (cone pigments), medium-wave-sensitive, 3 [Danio rerio] >gb|ALG92536.1| rhodopsin-like-2.3 cone opsin [Danio rerio] >dbj|BAC24131.1| green sensitive cone opsin [Danio rerio] ...
green-sensitive opsin-3 [Danio rerio] >sp|Q8AYM7.1| RecName: Full=Green-sensitive opsin-3; AltName: Full=Green cone photoreceptor pigment 3; AltName: Full=Opsin RH2-3; AltName: Full=Opsin-1, medium-wave-sensitive 3 [Danio rerio] >gb|AAH75989.1| Opsin 1 (cone pigments), medium-wave-sensitive, 3 [Danio rerio] >gb|ALG92536.1| rhodopsin-like-2.3 cone opsin [Danio rerio] >dbj|BAC24131.1| green sensitive cone opsin [Danio rerio]
349 aa protein
accession:NP_878312.1
green-sensitive opsin-4 sensitive opsin 2 [Danio rerio] ...
green-sensitive opsin-4 [Danio rerio] >gb|AAD24753.1| green-sensitive opsin 2 [Danio rerio]
349 aa protein
accession:NP_571329.1
rhodopsin 021021058.1| rhodopsin [Mus caroli] >sp|P15409.2| RecName: Full=Rhodopsin [Mus musculus] >gb|AAH13125.1| Rhodopsin [Mus musculus] >gb|AAH31766.1| Rhodopsin [Mus musculus] >gb|EDK99545.1| rhodopsin, isoform CRA_a [Mus musculus] >dbj|BAC31871.1| unnamed protein product [Mus musculus] >dbj|BAC31908.1| unnamed protein product [Mus musculus] ...
rhodopsin [Mus musculus] >ref|XP_021021058.1| rhodopsin [Mus caroli] >sp|P15409.2| RecName: Full=Rhodopsin [Mus musculus] >gb|AAH13125.1| Rhodopsin [Mus musculus] >gb|AAH31766.1| Rhodopsin [Mus musculus] >gb|EDK99545.1| rhodopsin, isoform CRA_a [Mus musculus] >dbj|BAC31871.1| unnamed protein product [Mus musculus] >dbj|BAC31908.1| unnamed protein product [Mus musculus]
348 aa protein
accession:NP_663358.1
rhodopsin isoform X1 ...
rhodopsin isoform X1 [Mus musculus]
344 aa protein
accession:XP_006505923.1
Query: short-wave-sensitive opsin 1 =Short-wave-sensitive opsin 1; Short=S opsin; AltName: Full=Blue cone photoreceptor pigment; AltName: Full=Blue-sensitive opsin; Short=BOP; AltName: Full=Short wavelength-sensitive cone opsin [Mus musculus] >gb|AAA92458.1| blue cone pigment [Mus musculus] >gb|AAB53320.1| blue cone pigment [Mus musculus] >gb|AAG17989.1| blue opsin [Mus musculus] >gb|AAG17990.1| blue opsin [Mus musculus] >gb|AAH26021.1| Opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) [Mus musculus] ...
short-wave-sensitive opsin 1 [Mus musculus] >sp|P51491.1| RecName: Full=Short-wave-sensitive opsin 1; Short=S opsin; AltName: Full=Blue cone photoreceptor pigment; AltName: Full=Blue-sensitive opsin; Short=BOP; AltName: Full=Short wavelength-sensitive cone opsin [Mus musculus] >gb|AAA92458.1| blue cone pigment [Mus musculus] >gb|AAB53320.1| blue cone pigment [Mus musculus] >gb|AAG17989.1| blue opsin [Mus musculus] >gb|AAG17990.1| blue opsin [Mus musculus] >gb|AAH26021.1| Opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) [Mus musculus]
346 aa protein
accession:NP_031564.1
short-wave-sensitive opsin 1 =Short-wave-sensitive opsin 1; AltName: Full=Blue cone photoreceptor pigment; AltName: Full=Blue-sensitive opsin; Short=BOP [Homo sapiens] ...
short-wave-sensitive opsin 1 [Homo sapiens] >sp|P03999.2| RecName: Full=Short-wave-sensitive opsin 1; AltName: Full=Blue cone photoreceptor pigment; AltName: Full=Blue-sensitive opsin; Short=BOP [Homo sapiens]
345 aa protein
accession:NP_001372054.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
short-wave-sensitive opsin 1 [Homo sapiens] >sp|P03999.2| RecName: Full=Short-wave-sensitive opsin 1; AltName: Full=Blue cone photoreceptor pigment; AltName: Full=Blue-sensitive opsin; Short=BOP [Homo sapiens]
625 625 99% 0.086.01% NP_001372054.1
2
green-sensitive opsin-3 [Danio rerio] >sp|Q8AYM7.1| RecName: Full=Green-sensitive opsin-3; AltName: Full=Green cone photoreceptor pigment 3; AltName: Full=Opsin RH2-3; AltName: Full=Opsin-1, medium-wave-sensitive 3 [Danio rerio] >gb|AAH75989.1| Opsin 1 (cone pigments), medium-wave-sensitive, 3 [Danio rerio] >gb|ALG92536.1| rhodopsin-like-2.3 cone opsin [Danio rerio] >dbj|BAC24131.1| green sensitive cone opsin [Danio rerio]
320 320 93% 3e-10747.09% NP_878312.1
3
rhodopsin [Mus musculus] >ref|XP_021021058.1| rhodopsin [Mus caroli] >sp|P15409.2| RecName: Full=Rhodopsin [Mus musculus] >gb|AAH13125.1| Rhodopsin [Mus musculus] >gb|AAH31766.1| Rhodopsin [Mus musculus] >gb|EDK99545.1| rhodopsin, isoform CRA_a [Mus musculus] >dbj|BAC31871.1| unnamed protein product [Mus musculus] >dbj|BAC31908.1| unnamed protein product [Mus musculus]
319 319 98% 7e-10744.99% NP_663358.1
4
green-sensitive opsin-4 [Danio rerio] >gb|AAD24753.1| green-sensitive opsin 2 [Danio rerio]
318 318 93% 2e-10645.26% NP_571329.1
5
rhodopsin isoform X1 [Mus musculus]
317 317 98% 3e-10645.09% XP_006505923.1