Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_008760741.1
PREDICTED: mRNA export factor isoform X3 [Rattus norvegicus]
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Query length:
368 aa
DOMAINS: and other(s) domains
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mRNA export factor rae-1 Full=mRNA export factor rae-1; AltName: Full=Nuclear pore complex protein 17; AltName: Full=Nucleoporin-17 [Caenorhabditis elegans] >emb|CAB02280.1| mRNA export factor rae-1 [Caenorhabditis elegans]
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mRNA export factor rae-1 [Caenorhabditis elegans] >sp|Q93454.1| RecName: Full=mRNA export factor rae-1; AltName: Full=Nuclear pore complex protein 17; AltName: Full=Nucleoporin-17 [Caenorhabditis elegans] >emb|CAB02280.1| mRNA export factor rae-1 [Caenorhabditis elegans]
373 aa protein
accession:NP_492650.1
Rae1 f|XP_002039794.1| mRNA export factor [Drosophila sechellia] >ref|XP_002082516.2| protein Rae1 [Drosophila simulans] >ref|XP_033154683.1| mRNA export factor [Drosophila mauritiana] >sp|Q9W2E7.1| RecName: Full=Protein Rae1 [Drosophila melanogaster] >gb|ACL84766.1| Rae1-PA, partial [synthetic construct] >gb|AAF46745.1| Rae1 [Drosophila melanogaster] >gb|ACL89660.1| Rae1-PA [synthetic construct] >gb|EDW56659.1| GM15702 [Drosophila sechellia] >gb|KMY95605.1| uncharacterized protein Dsimw501_GD25180 [Drosophila simulans]
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Rae1 [Drosophila melanogaster] >ref|XP_002039794.1| mRNA export factor [Drosophila sechellia] >ref|XP_002082516.2| protein Rae1 [Drosophila simulans] >ref|XP_033154683.1| mRNA export factor [Drosophila mauritiana] >sp|Q9W2E7.1| RecName: Full=Protein Rae1 [Drosophila melanogaster] >gb|ACL84766.1| Rae1-PA, partial [synthetic construct] >gb|AAF46745.1| Rae1 [Drosophila melanogaster] >gb|ACL89660.1| Rae1-PA [synthetic construct] >gb|EDW56659.1| GM15702 [Drosophila sechellia] >gb|KMY95605.1| uncharacterized protein Dsimw501_GD25180 [Drosophila simulans]
346 aa protein
accession:NP_611597.1
Transducin/WD40 repeat-like superfamily protein ame: Full=RNA export factor 1 [Arabidopsis thaliana] >gb|KAG7652604.1| WD40 repeat [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7660286.1| WD40 repeat [Arabidopsis suecica] >gb|AAF14655.1| F23A5.2(form2) [Arabidopsis thaliana] >gb|AAM65220.1| mRNA export protein, putative [Arabidopsis thaliana] >gb|ABF18994.1| At1g80670 [Arabidopsis thaliana]
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Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana] >sp|Q38942.2| RecName: Full=Protein RAE1; AltName: Full=RNA export factor 1 [Arabidopsis thaliana] >gb|KAG7652604.1| WD40 repeat [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7660286.1| WD40 repeat [Arabidopsis suecica] >gb|AAF14655.1| F23A5.2(form2) [Arabidopsis thaliana] >gb|AAM65220.1| mRNA export protein, putative [Arabidopsis thaliana] >gb|ABF18994.1| At1g80670 [Arabidopsis thaliana]
349 aa protein
accession:NP_178182.1
putative mRNA export factor in RAE1 [Glycine soja] >gb|KAG5051589.1| hypothetical protein JHK87_003787 [Glycine soja] >gb|KAG5062909.1| hypothetical protein JHK85_004092 [Glycine max] >gb|KAG5079852.1| hypothetical protein JHK86_003917 [Glycine max] >gb|KAH1060006.1| hypothetical protein GYH30_003811 [Glycine max] >gb|KAH1060007.1| hypothetical protein GYH30_003811 [Glycine max]
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putative mRNA export factor [Glycine max] >ref|XP_028204105.1| protein RAE1 [Glycine soja] >gb|KAG5051589.1| hypothetical protein JHK87_003787 [Glycine soja] >gb|KAG5062909.1| hypothetical protein JHK85_004092 [Glycine max] >gb|KAG5079852.1| hypothetical protein JHK86_003917 [Glycine max] >gb|KAH1060006.1| hypothetical protein GYH30_003811 [Glycine max] >gb|KAH1060007.1| hypothetical protein GYH30_003811 [Glycine max]
347 aa protein
accession:NP_001242030.2
Query: PREDICTED: mRNA export factor isoform X3
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PREDICTED: mRNA export factor isoform X3 [Rattus norvegicus]
368 aa protein
accession:XP_008760741.1
mRNA export factor AE1 RNA export 1 homolog (S. pombe) [Danio rerio]
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mRNA export factor [Danio rerio] >gb|AAH49445.1| RAE1 RNA export 1 homolog (S. pombe) [Danio rerio]
368 aa protein
accession:NP_957292.1
DOMAINS: and other(s) domains
...
mRNA export factor rae-1 [Caenorhabditis elegans] >sp|Q93454.1| RecName: Full=mRNA export factor rae-1; AltName: Full=Nuclear pore complex protein 17; AltName: Full=Nucleoporin-17 [Caenorhabditis elegans] >emb|CAB02280.1| mRNA export factor rae-1 [Caenorhabditis elegans]
373 aa protein
accession:NP_492650.1
Rae1 [Drosophila melanogaster] >ref|XP_002039794.1| mRNA export factor [Drosophila sechellia] >ref|XP_002082516.2| protein Rae1 [Drosophila simulans] >ref|XP_033154683.1| mRNA export factor [Drosophila mauritiana] >sp|Q9W2E7.1| RecName: Full=Protein Rae1 [Drosophila melanogaster] >gb|ACL84766.1| Rae1-PA, partial [synthetic construct] >gb|AAF46745.1| Rae1 [Drosophila melanogaster] >gb|ACL89660.1| Rae1-PA [synthetic construct] >gb|EDW56659.1| GM15702 [Drosophila sechellia] >gb|KMY95605.1| uncharacterized protein Dsimw501_GD25180 [Drosophila simulans]
346 aa protein
accession:NP_611597.1
Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana] >sp|Q38942.2| RecName: Full=Protein RAE1; AltName: Full=RNA export factor 1 [Arabidopsis thaliana] >gb|KAG7652604.1| WD40 repeat [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7660286.1| WD40 repeat [Arabidopsis suecica] >gb|AAF14655.1| F23A5.2(form2) [Arabidopsis thaliana] >gb|AAM65220.1| mRNA export protein, putative [Arabidopsis thaliana] >gb|ABF18994.1| At1g80670 [Arabidopsis thaliana]
349 aa protein
accession:NP_178182.1
putative mRNA export factor [Glycine max] >ref|XP_028204105.1| protein RAE1 [Glycine soja] >gb|KAG5051589.1| hypothetical protein JHK87_003787 [Glycine soja] >gb|KAG5062909.1| hypothetical protein JHK85_004092 [Glycine max] >gb|KAG5079852.1| hypothetical protein JHK86_003917 [Glycine max] >gb|KAH1060006.1| hypothetical protein GYH30_003811 [Glycine max] >gb|KAH1060007.1| hypothetical protein GYH30_003811 [Glycine max]
347 aa protein
accession:NP_001242030.2
PREDICTED: mRNA export factor isoform X3 [Rattus norvegicus]
368 aa protein
accession:XP_008760741.1
mRNA export factor [Danio rerio] >gb|AAH49445.1| RAE1 RNA export 1 homolog (S. pombe) [Danio rerio]
368 aa protein
accession:NP_957292.1
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
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Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 730 | 730 | 100% | 0.0 | 91.03% | NP_957292.1 | |
2 | 518 | 518 | 94% | 0.0 | 68.77% | NP_611597.1 | |
3 | 365 | 365 | 99% | 2e-124 | 51.33% | NP_492650.1 | |
4 | 348 | 348 | 95% | 7e-118 | 50.28% | NP_178182.1 | |
5 | 340 | 340 | 95% | 1e-114 | 50.84% | NP_001242030.2 |