Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_034981.1
myeloid differentiation primary response protein MyD88 [Mus musculus] >sp|P22366.3| RecName: Full=Myeloid differentiation primary response protein MyD88 [Mus musculus] >gb|AAB83958.1| myleoid differentiation primary response marker [Mus musculus] >gb|AAH05591.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|AAH58787.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|EDL09226.1| myeloid differentiation primary response gene 88, isoform CRA_c [Mus musculus] >dbj|BAE30658.1| unnamed protein product [Mus musculus]
...
Query length:
296 aa
DOMAINS: and other(s) domains
...
interleukin-1 receptor accessory protein isoform d precursor in isoform X1 [Mus musculus] >ref|XP_036015685.1| interleukin-1 receptor accessory protein isoform X1 [Mus musculus] >dbj|BAE23128.1| unnamed protein product [Mus musculus]
...
interleukin-1 receptor accessory protein isoform d precursor [Mus musculus] >ref|XP_036015684.1| interleukin-1 receptor accessory protein isoform X1 [Mus musculus] >ref|XP_036015685.1| interleukin-1 receptor accessory protein isoform X1 [Mus musculus] >dbj|BAE23128.1| unnamed protein product [Mus musculus]
685 aa protein
accession:NP_001152790.1
tehao, isoform B 1| tehao, isoform A [Drosophila melanogaster] >gb|AAF53306.1| tehao, isoform A [Drosophila melanogaster] >gb|AHN54415.1| tehao, isoform B [Drosophila melanogaster]
...
tehao, isoform B [Drosophila melanogaster] >ref|NP_477438.1| tehao, isoform A [Drosophila melanogaster] >gb|AAF53306.1| tehao, isoform A [Drosophila melanogaster] >gb|AHN54415.1| tehao, isoform B [Drosophila melanogaster]
795 aa protein
accession:NP_001285901.1
myeloid differentiation primary response protein MyD88 nse gene (88) [Danio rerio] >gb|AAI64642.1| Myd88 protein [Danio rerio]
...
myeloid differentiation primary response protein MyD88 [Danio rerio] >gb|AAH83419.1| Myeloid differentiation primary response gene (88) [Danio rerio] >gb|AAI64642.1| Myd88 protein [Danio rerio]
284 aa protein
accession:NP_997979.2
Query: myeloid differentiation primary response protein MyD88 rimary response protein MyD88 [Mus musculus] >gb|AAB83958.1| myleoid differentiation primary response marker [Mus musculus] >gb|AAH05591.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|AAH58787.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|EDL09226.1| myeloid differentiation primary response gene 88, isoform CRA_c [Mus musculus] >dbj|BAE30658.1| unnamed protein product [Mus musculus]
...
myeloid differentiation primary response protein MyD88 [Mus musculus] >sp|P22366.3| RecName: Full=Myeloid differentiation primary response protein MyD88 [Mus musculus] >gb|AAB83958.1| myleoid differentiation primary response marker [Mus musculus] >gb|AAH05591.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|AAH58787.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|EDL09226.1| myeloid differentiation primary response gene 88, isoform CRA_c [Mus musculus] >dbj|BAE30658.1| unnamed protein product [Mus musculus]
296 aa protein
accession:NP_034981.1
myeloid differentiation primary response protein MyD88 isoform 2 ponse protein MyD88 [Homo sapiens] >gb|AAX31847.1| myeloid differentiation primary response gene 88 [synthetic construct] >emb|SJX33386.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAC50954.1| MyD88 [Homo sapiens] >gb|AAH13589.1| Myeloid differentiation primary response gene (88) [Homo sapiens] >gb|AAP36040.1| myeloid differentiation primary response gene (88) [Homo sapiens]
...
myeloid differentiation primary response protein MyD88 isoform 2 [Homo sapiens] >sp|Q99836.1| RecName: Full=Myeloid differentiation primary response protein MyD88 [Homo sapiens] >gb|AAX31847.1| myeloid differentiation primary response gene 88 [synthetic construct] >emb|SJX33386.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAC50954.1| MyD88 [Homo sapiens] >gb|AAH13589.1| Myeloid differentiation primary response gene (88) [Homo sapiens] >gb|AAP36040.1| myeloid differentiation primary response gene (88) [Homo sapiens]
296 aa protein
accession:NP_002459.3
myeloid differentiation primary response protein MyD88 isoform 1 88) protein, partial [synthetic construct] >gb|ACE87392.1| myeloid differentiation primary response gene (88) protein [synthetic construct] >gb|EAW64520.1| myeloid differentiation primary response gene (88), isoform CRA_a [Homo sapiens] >gb|KAI2528856.1| MYD88 innate immune signal transduction adaptor [Homo sapiens] >gb|KAI4028926.1| MYD88 innate immune signal transduction adaptor [Homo sapiens]
...
myeloid differentiation primary response protein MyD88 isoform 1 [Homo sapiens] >gb|ACE86707.1| myeloid differentiation primary response gene (88) protein, partial [synthetic construct] >gb|ACE87392.1| myeloid differentiation primary response gene (88) protein [synthetic construct] >gb|EAW64520.1| myeloid differentiation primary response gene (88), isoform CRA_a [Homo sapiens] >gb|KAI2528856.1| MYD88 innate immune signal transduction adaptor [Homo sapiens] >gb|KAI4028926.1| MYD88 innate immune signal transduction adaptor [Homo sapiens]
304 aa protein
accession:NP_001166038.2
DOMAINS: and other(s) domains
...
interleukin-1 receptor accessory protein isoform d precursor [Mus musculus] >ref|XP_036015684.1| interleukin-1 receptor accessory protein isoform X1 [Mus musculus] >ref|XP_036015685.1| interleukin-1 receptor accessory protein isoform X1 [Mus musculus] >dbj|BAE23128.1| unnamed protein product [Mus musculus]
685 aa protein
accession:NP_001152790.1
tehao, isoform B [Drosophila melanogaster] >ref|NP_477438.1| tehao, isoform A [Drosophila melanogaster] >gb|AAF53306.1| tehao, isoform A [Drosophila melanogaster] >gb|AHN54415.1| tehao, isoform B [Drosophila melanogaster]
795 aa protein
accession:NP_001285901.1
myeloid differentiation primary response protein MyD88 [Danio rerio] >gb|AAH83419.1| Myeloid differentiation primary response gene (88) [Danio rerio] >gb|AAI64642.1| Myd88 protein [Danio rerio]
284 aa protein
accession:NP_997979.2
myeloid differentiation primary response protein MyD88 [Mus musculus] >sp|P22366.3| RecName: Full=Myeloid differentiation primary response protein MyD88 [Mus musculus] >gb|AAB83958.1| myleoid differentiation primary response marker [Mus musculus] >gb|AAH05591.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|AAH58787.1| Myeloid differentiation primary response gene 88 [Mus musculus] >gb|EDL09226.1| myeloid differentiation primary response gene 88, isoform CRA_c [Mus musculus] >dbj|BAE30658.1| unnamed protein product [Mus musculus]
296 aa protein
accession:NP_034981.1
myeloid differentiation primary response protein MyD88 isoform 2 [Homo sapiens] >sp|Q99836.1| RecName: Full=Myeloid differentiation primary response protein MyD88 [Homo sapiens] >gb|AAX31847.1| myeloid differentiation primary response gene 88 [synthetic construct] >emb|SJX33386.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAC50954.1| MyD88 [Homo sapiens] >gb|AAH13589.1| Myeloid differentiation primary response gene (88) [Homo sapiens] >gb|AAP36040.1| myeloid differentiation primary response gene (88) [Homo sapiens]
296 aa protein
accession:NP_002459.3
myeloid differentiation primary response protein MyD88 isoform 1 [Homo sapiens] >gb|ACE86707.1| myeloid differentiation primary response gene (88) protein, partial [synthetic construct] >gb|ACE87392.1| myeloid differentiation primary response gene (88) protein [synthetic construct] >gb|EAW64520.1| myeloid differentiation primary response gene (88), isoform CRA_a [Homo sapiens] >gb|KAI2528856.1| MYD88 innate immune signal transduction adaptor [Homo sapiens] >gb|KAI4028926.1| MYD88 innate immune signal transduction adaptor [Homo sapiens]
304 aa protein
accession:NP_001166038.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 483 | 483 | 93% | 9e-173 | 84.53% | NP_002459.3 | |
2 | 362 | 362 | 93% | 2e-125 | 62.23% | NP_997979.2 | |
3 | 57.8 | 57.8 | 45% | 6e-08 | 29.17% | NP_001152790.1 | |
4 | 55.1 | 55.1 | 44% | 4e-07 | 24.46% | NP_001285901.1 | |
5 | 474 | 474 | 93% | 2e-169 | 82.17% | NP_001166038.2 |