Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P52701.2
RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName: Full=G/T mismatch-binding protein; Short=GTBP; Short=GTMBP; AltName: Full=MutS protein homolog 6; AltName: Full=MutS-alpha 160 kDa subunit; Short=p160
...
Query length:
1360 aa
DOMAINS: and other(s) domains
...
DNA mismatch repair protein tch repair protein [Caenorhabditis elegans]
...
DNA mismatch repair protein [Caenorhabditis elegans] >emb|CCD72556.1| DNA mismatch repair protein [Caenorhabditis elegans]
1186 aa protein
accession:NP_491163.1
Msh6 |Q9VUM0.2| RecName: Full=Probable DNA mismatch repair protein Msh6 [Drosophila melanogaster] >gb|AAF49656.2| Msh6 [Drosophila melanogaster] >gb|ACJ13250.1| LD20722p [Drosophila melanogaster]
...
Msh6 [Drosophila melanogaster] >sp|Q9VUM0.2| RecName: Full=Probable DNA mismatch repair protein Msh6 [Drosophila melanogaster] >gb|AAF49656.2| Msh6 [Drosophila melanogaster] >gb|ACJ13250.1| LD20722p [Drosophila melanogaster]
1190 aa protein
accession:NP_648755.1
DNA mismatch repair protein Msh6 (E. coli) [Danio rerio]
...
DNA mismatch repair protein Msh6 [Danio rerio] >gb|AAH44350.1| MutS homolog 6 (E. coli) [Danio rerio]
1369 aa protein
accession:NP_878280.1
DNA mismatch repair protein Msh6 mismatch repair protein Msh6; AltName: Full=G/T mismatch-binding protein; Short=GTBP; Short=GTMBP; AltName: Full=MutS protein homolog 6; AltName: Full=MutS-alpha 160 kDa subunit; Short=p160 [Mus musculus] >gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus] >gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus] >gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
...
DNA mismatch repair protein Msh6 [Mus musculus] >sp|P54276.3| RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T mismatch-binding protein; Short=GTBP; Short=GTMBP; AltName: Full=MutS protein homolog 6; AltName: Full=MutS-alpha 160 kDa subunit; Short=p160 [Mus musculus] >gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus] >gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus] >gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
1358 aa protein
accession:NP_034960.1
Query: RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName: Full=G/T mismatch-binding protein; Short=GTBP; Short=GTMBP; AltName: Full=MutS protein homolog 6; AltName: Full=MutS-alpha 160 kDa subunit; Short=p160
...
RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName: Full=G/T mismatch-binding protein; Short=GTBP; Short=GTMBP; AltName: Full=MutS protein homolog 6; AltName: Full=MutS-alpha 160 kDa subunit; Short=p160
1360 aa protein
accession:P52701.2
DNA mismatch repair protein Msh6 isoform 5
...
DNA mismatch repair protein Msh6 isoform 5 [Homo sapiens]
1362 aa protein
accession:NP_001393742.1
DOMAINS: and other(s) domains
...
DNA mismatch repair protein [Caenorhabditis elegans] >emb|CCD72556.1| DNA mismatch repair protein [Caenorhabditis elegans]
1186 aa protein
accession:NP_491163.1
Msh6 [Drosophila melanogaster] >sp|Q9VUM0.2| RecName: Full=Probable DNA mismatch repair protein Msh6 [Drosophila melanogaster] >gb|AAF49656.2| Msh6 [Drosophila melanogaster] >gb|ACJ13250.1| LD20722p [Drosophila melanogaster]
1190 aa protein
accession:NP_648755.1
DNA mismatch repair protein Msh6 [Danio rerio] >gb|AAH44350.1| MutS homolog 6 (E. coli) [Danio rerio]
1369 aa protein
accession:NP_878280.1
DNA mismatch repair protein Msh6 [Mus musculus] >sp|P54276.3| RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T mismatch-binding protein; Short=GTBP; Short=GTMBP; AltName: Full=MutS protein homolog 6; AltName: Full=MutS-alpha 160 kDa subunit; Short=p160 [Mus musculus] >gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus] >gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus] >gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
1358 aa protein
accession:NP_034960.1
RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName: Full=G/T mismatch-binding protein; Short=GTBP; Short=GTMBP; AltName: Full=MutS protein homolog 6; AltName: Full=MutS-alpha 160 kDa subunit; Short=p160
1360 aa protein
accession:P52701.2
DNA mismatch repair protein Msh6 isoform 5 [Homo sapiens]
1362 aa protein
accession:NP_001393742.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2821 | 2821 | 100% | 0.0 | 99.85% | NP_001393742.1 | |
| 2 | 2376 | 2376 | 100% | 0.0 | 85.34% | NP_034960.1 | |
| 3 | 1645 | 1645 | 100% | 0.0 | 59.87% | NP_878280.1 | |
| 4 | 899 | 899 | 84% | 0.0 | 42.14% | NP_648755.1 | |
| 5 | 711 | 711 | 70% | 0.0 | 40.49% | NP_491163.1 |