Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_055791.1
protein RRP5 homolog isoform 2 [Homo sapiens] >ref|XP_011537841.1| protein RRP5 homolog isoform X1 [Homo sapiens] >sp|Q14690.3| RecName: Full=Protein RRP5 homolog; AltName: Full=NF-kappa-B-binding protein; Short=NFBP; AltName: Full=Programmed cell death protein 11 [Homo sapiens] >gb|AAI72442.1| Programmed cell death 11 [synthetic construct] >gb|EAW49641.1| programmed cell death 11, isoform CRA_c [Homo sapiens] >gb|KAI2557160.1| programmed cell death 11 [Homo sapiens] >gb|KAI4077343.1| programmed cell death 11 [Homo sapiens]
...
Query length:
1871 aa
DOMAINS: and other(s) domains
...
RIBOSOMAL RNA PROCESSING 5 ll=rRNA biogenesis protein RRP5; Short=AtRrp5; AltName: Full=Ribosomal RNA-processing protein 5 [Arabidopsis thaliana] >gb|ANM64784.1| RIBOSOMAL RNA PROCESSING 5 [Arabidopsis thaliana]
...
RIBOSOMAL RNA PROCESSING 5 [Arabidopsis thaliana] >sp|F4J8K6.2| RecName: Full=rRNA biogenesis protein RRP5; Short=AtRrp5; AltName: Full=Ribosomal RNA-processing protein 5 [Arabidopsis thaliana] >gb|ANM64784.1| RIBOSOMAL RNA PROCESSING 5 [Arabidopsis thaliana]
1920 aa protein
accession:NP_001326789.1
rRNA biogenesis protein RRP5 isoform X2
...
rRNA biogenesis protein RRP5 isoform X2 [Glycine max]
1910 aa protein
accession:XP_006575180.1
protein RRP5 homolog isoform X1
...
protein RRP5 homolog isoform X1 [Danio rerio]
1815 aa protein
accession:XP_005160174.1
protein RRP5 homolog me: Full=Protein RRP5 homolog; AltName: Full=Apoptosis-linked gene 4 protein; AltName: Full=Programmed cell death protein 11 [Mus musculus]
...
protein RRP5 homolog [Mus musculus] >sp|Q6NS46.2| RecName: Full=Protein RRP5 homolog; AltName: Full=Apoptosis-linked gene 4 protein; AltName: Full=Programmed cell death protein 11 [Mus musculus]
1862 aa protein
accession:NP_035183.2
Query: protein RRP5 homolog isoform 2 RRP5 homolog isoform X1 [Homo sapiens] >sp|Q14690.3| RecName: Full=Protein RRP5 homolog; AltName: Full=NF-kappa-B-binding protein; Short=NFBP; AltName: Full=Programmed cell death protein 11 [Homo sapiens] >gb|AAI72442.1| Programmed cell death 11 [synthetic construct] >gb|EAW49641.1| programmed cell death 11, isoform CRA_c [Homo sapiens] >gb|KAI2557160.1| programmed cell death 11 [Homo sapiens] >gb|KAI4077343.1| programmed cell death 11 [Homo sapiens]
...
protein RRP5 homolog isoform 2 [Homo sapiens] >ref|XP_011537841.1| protein RRP5 homolog isoform X1 [Homo sapiens] >sp|Q14690.3| RecName: Full=Protein RRP5 homolog; AltName: Full=NF-kappa-B-binding protein; Short=NFBP; AltName: Full=Programmed cell death protein 11 [Homo sapiens] >gb|AAI72442.1| Programmed cell death 11 [synthetic construct] >gb|EAW49641.1| programmed cell death 11, isoform CRA_c [Homo sapiens] >gb|KAI2557160.1| programmed cell death 11 [Homo sapiens] >gb|KAI4077343.1| programmed cell death 11 [Homo sapiens]
1871 aa protein
accession:NP_055791.1
protein RRP5 homolog isoform 1 RRP5 homolog isoform X2 [Homo sapiens] >gb|EAW49639.1| programmed cell death 11, isoform CRA_a [Homo sapiens] >gb|KAI2557159.1| programmed cell death 11 [Homo sapiens] >gb|KAI4077344.1| programmed cell death 11 [Homo sapiens]
...
protein RRP5 homolog isoform 1 [Homo sapiens] >ref|XP_005269704.1| protein RRP5 homolog isoform X2 [Homo sapiens] >gb|EAW49639.1| programmed cell death 11, isoform CRA_a [Homo sapiens] >gb|KAI2557159.1| programmed cell death 11 [Homo sapiens] >gb|KAI4077344.1| programmed cell death 11 [Homo sapiens]
1872 aa protein
accession:NP_001397987.1
DOMAINS: and other(s) domains
...
RIBOSOMAL RNA PROCESSING 5 [Arabidopsis thaliana] >sp|F4J8K6.2| RecName: Full=rRNA biogenesis protein RRP5; Short=AtRrp5; AltName: Full=Ribosomal RNA-processing protein 5 [Arabidopsis thaliana] >gb|ANM64784.1| RIBOSOMAL RNA PROCESSING 5 [Arabidopsis thaliana]
1920 aa protein
accession:NP_001326789.1
rRNA biogenesis protein RRP5 isoform X2 [Glycine max]
1910 aa protein
accession:XP_006575180.1
protein RRP5 homolog isoform X1 [Danio rerio]
1815 aa protein
accession:XP_005160174.1
protein RRP5 homolog [Mus musculus] >sp|Q6NS46.2| RecName: Full=Protein RRP5 homolog; AltName: Full=Apoptosis-linked gene 4 protein; AltName: Full=Programmed cell death protein 11 [Mus musculus]
1862 aa protein
accession:NP_035183.2
protein RRP5 homolog isoform 2 [Homo sapiens] >ref|XP_011537841.1| protein RRP5 homolog isoform X1 [Homo sapiens] >sp|Q14690.3| RecName: Full=Protein RRP5 homolog; AltName: Full=NF-kappa-B-binding protein; Short=NFBP; AltName: Full=Programmed cell death protein 11 [Homo sapiens] >gb|AAI72442.1| Programmed cell death 11 [synthetic construct] >gb|EAW49641.1| programmed cell death 11, isoform CRA_c [Homo sapiens] >gb|KAI2557160.1| programmed cell death 11 [Homo sapiens] >gb|KAI4077343.1| programmed cell death 11 [Homo sapiens]
1871 aa protein
accession:NP_055791.1
protein RRP5 homolog isoform 1 [Homo sapiens] >ref|XP_005269704.1| protein RRP5 homolog isoform X2 [Homo sapiens] >gb|EAW49639.1| programmed cell death 11, isoform CRA_a [Homo sapiens] >gb|KAI2557159.1| programmed cell death 11 [Homo sapiens] >gb|KAI4077344.1| programmed cell death 11 [Homo sapiens]
1872 aa protein
accession:NP_001397987.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 3831 | 3831 | 100% | 0.0 | 99.95% | NP_001397987.1 | |
2 | 2982 | 2982 | 100% | 0.0 | 80.50% | NP_035183.2 | |
3 | 1388 | 1388 | 99% | 0.0 | 43.29% | XP_005160174.1 | |
4 | 699 | 699 | 99% | 0.0 | 28.48% | NP_001326789.1 | |
5 | 442 | 787 | 84% | 6e-126 | 26.87% | XP_006575180.1 |