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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P40937.1 RecName: Full=Replication factor C subunit 5; AltName: Full=Activator 1 36 kDa subunit; Short=A1 36 kDa subunit; AltName: Full=Activator 1 subunit 5; AltName: Full=Replication factor C 36 kDa subunit; Short=RF-C 36 kDa subunit; Short=RFC36 ... Query length: 340 aa
replication factor C subunit 3 ion factor C subunit 5 [Drosophila sechellia] >ref|XP_002078954.1| replication factor C subunit 5 [Drosophila simulans] >ref|XP_033174144.1| replication factor C subunit 5 [Drosophila mauritiana] >gb|ACL87915.1| RfC3-PA, partial [synthetic construct] >gb|AAF52944.2| replication factor C subunit 3 [Drosophila melanogaster] >gb|AAF63387.1| replication factor C subunit 3 [Drosophila melanogaster] >gb|AAM51048.1| SD11293p [Drosophila melanogaster] >gb|ACL92227.1| RfC3-PA [synthetic construct] ...
replication factor C subunit 3 [Drosophila melanogaster] >ref|XP_002036512.1| replication factor C subunit 5 [Drosophila sechellia] >ref|XP_002078954.1| replication factor C subunit 5 [Drosophila simulans] >ref|XP_033174144.1| replication factor C subunit 5 [Drosophila mauritiana] >gb|ACL87915.1| RfC3-PA, partial [synthetic construct] >gb|AAF52944.2| replication factor C subunit 3 [Drosophila melanogaster] >gb|AAF63387.1| replication factor C subunit 3 [Drosophila melanogaster] >gb|AAM51048.1| SD11293p [Drosophila melanogaster] >gb|ACL92227.1| RfC3-PA [synthetic construct]
332 aa protein
accession:NP_609399.1
replication factor C subunit 3 l protein GYH30_011022 [Glycine max] >gb|KAH1255861.1| Replication factor C subunit 3 [Glycine max] >gb|KRH64666.1| hypothetical protein GLYMA_04G248900v4 [Glycine max] ...
replication factor C subunit 3 [Glycine max] >gb|KAH1113095.1| hypothetical protein GYH30_011022 [Glycine max] >gb|KAH1255861.1| Replication factor C subunit 3 [Glycine max] >gb|KRH64666.1| hypothetical protein GLYMA_04G248900v4 [Glycine max]
363 aa protein
accession:XP_003523440.1
replication factor C subunit 3 eplication factor C subunit 5; Short=AtRFC5; AltName: Full=Activator 1 subunit 5; AltName: Full=Protein EMBRYO DEFECTIVE 2810 [Arabidopsis thaliana] >gb|KAG7652042.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7659903.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis suecica] >gb|AAG51681.1| putative replication factor C; 24844-22715 [Arabidopsis thaliana] >gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] >gb|AAM51357.1| putative replication factor C [Arabidopsis thaliana] ...
replication factor C subunit 3 [Arabidopsis thaliana] >sp|Q9CAQ8.1| RecName: Full=Replication factor C subunit 5; Short=AtRFC5; AltName: Full=Activator 1 subunit 5; AltName: Full=Protein EMBRYO DEFECTIVE 2810 [Arabidopsis thaliana] >gb|KAG7652042.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7659903.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis suecica] >gb|AAG51681.1| putative replication factor C; 24844-22715 [Arabidopsis thaliana] >gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] >gb|AAM51357.1| putative replication factor C [Arabidopsis thaliana]
369 aa protein
accession:NP_177871.1
replication factor C subunit 5 actor C subunit RFC5 [Danio rerio] ...
replication factor C subunit 5 [Danio rerio] >gb|AAT68073.1| replication factor C subunit RFC5 [Danio rerio]
334 aa protein
accession:NP_001003862.1
Query: RecName: Full=Replication factor C subunit 5; AltName: Full=Activator 1 36 kDa subunit; Short=A1 36 kDa subunit; AltName: Full=Activator 1 subunit 5; AltName: Full=Replication factor C 36 kDa subunit; Short=RF-C 36 kDa subunit; Short=RFC36 ...
RecName: Full=Replication factor C subunit 5; AltName: Full=Activator 1 36 kDa subunit; Short=A1 36 kDa subunit; AltName: Full=Activator 1 subunit 5; AltName: Full=Replication factor C 36 kDa subunit; Short=RF-C 36 kDa subunit; Short=RFC36
340 aa protein
accession:P40937.1
replication factor C subunit 5 eplication factor C subunit 5; AltName: Full=Activator 1 36 kDa subunit; Short=A1 36 kDa subunit; AltName: Full=Activator 1 subunit 5; AltName: Full=Replication factor C 36 kDa subunit; Short=RF-C 36 kDa subunit; Short=RFC36 [Mus musculus] >gb|AAH89001.1| Replication factor C (activator 1) 5 [Mus musculus] >gb|EDL19804.1| mCG8761 [Mus musculus] >dbj|BAB27652.1| unnamed protein product [Mus musculus] >dbj|BAE41638.1| unnamed protein product [Mus musculus] ...
replication factor C subunit 5 [Mus musculus] >sp|Q9D0F6.1| RecName: Full=Replication factor C subunit 5; AltName: Full=Activator 1 36 kDa subunit; Short=A1 36 kDa subunit; AltName: Full=Activator 1 subunit 5; AltName: Full=Replication factor C 36 kDa subunit; Short=RF-C 36 kDa subunit; Short=RFC36 [Mus musculus] >gb|AAH89001.1| Replication factor C (activator 1) 5 [Mus musculus] >gb|EDL19804.1| mCG8761 [Mus musculus] >dbj|BAB27652.1| unnamed protein product [Mus musculus] >dbj|BAE41638.1| unnamed protein product [Mus musculus]
339 aa protein
accession:NP_082404.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
replication factor C subunit 5 [Mus musculus] >sp|Q9D0F6.1| RecName: Full=Replication factor C subunit 5; AltName: Full=Activator 1 36 kDa subunit; Short=A1 36 kDa subunit; AltName: Full=Activator 1 subunit 5; AltName: Full=Replication factor C 36 kDa subunit; Short=RF-C 36 kDa subunit; Short=RFC36 [Mus musculus] >gb|AAH89001.1| Replication factor C (activator 1) 5 [Mus musculus] >gb|EDL19804.1| mCG8761 [Mus musculus] >dbj|BAB27652.1| unnamed protein product [Mus musculus] >dbj|BAE41638.1| unnamed protein product [Mus musculus]
668 668 99% 0.094.38% NP_082404.1
2
replication factor C subunit 5 [Danio rerio] >gb|AAT68073.1| replication factor C subunit RFC5 [Danio rerio]
593 593 98% 0.082.14% NP_001003862.1
3
replication factor C subunit 3 [Drosophila melanogaster] >ref|XP_002036512.1| replication factor C subunit 5 [Drosophila sechellia] >ref|XP_002078954.1| replication factor C subunit 5 [Drosophila simulans] >ref|XP_033174144.1| replication factor C subunit 5 [Drosophila mauritiana] >gb|ACL87915.1| RfC3-PA, partial [synthetic construct] >gb|AAF52944.2| replication factor C subunit 3 [Drosophila melanogaster] >gb|AAF63387.1| replication factor C subunit 3 [Drosophila melanogaster] >gb|AAM51048.1| SD11293p [Drosophila melanogaster] >gb|ACL92227.1| RfC3-PA [synthetic construct]
427 427 94% 1e-14961.99% NP_609399.1
4
replication factor C subunit 3 [Glycine max] >gb|KAH1113095.1| hypothetical protein GYH30_011022 [Glycine max] >gb|KAH1255861.1| Replication factor C subunit 3 [Glycine max] >gb|KRH64666.1| hypothetical protein GLYMA_04G248900v4 [Glycine max]
407 407 96% 3e-14158.73% XP_003523440.1
5
replication factor C subunit 3 [Arabidopsis thaliana] >sp|Q9CAQ8.1| RecName: Full=Replication factor C subunit 5; Short=AtRFC5; AltName: Full=Activator 1 subunit 5; AltName: Full=Protein EMBRYO DEFECTIVE 2810 [Arabidopsis thaliana] >gb|KAG7652042.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis thaliana x Arabidopsis arenosa] >gb|KAG7659903.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis suecica] >gb|AAG51681.1| putative replication factor C; 24844-22715 [Arabidopsis thaliana] >gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] >gb|AAM51357.1| putative replication factor C [Arabidopsis thaliana]
392 392 94% 3e-13557.88% NP_177871.1