Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_005798.3
proteoglycan 4 isoform A preproprotein [Homo sapiens] >sp|Q92954.3| RecName: Full=Proteoglycan 4; AltName: Full=Lubricin; AltName: Full=Megakaryocyte-stimulating factor; AltName: Full=Superficial zone proteoglycan; Contains: RecName: Full=Proteoglycan 4 C-terminal part; Flags: Precursor [Homo sapiens] >gb|KAI2520717.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084243.1| proteoglycan 4 [Homo sapiens]
...
Query length:
1404 aa
DOMAINS: and other(s) domains
...
dumpy, isoform S dumpy, isoform S [Drosophila melanogaster]
...
dumpy, isoform S [Drosophila melanogaster] >gb|AGB92570.1| dumpy, isoform S [Drosophila melanogaster]
18641 aa protein
accession:NP_001260034.1
Query: proteoglycan 4 isoform A preproprotein can 4; AltName: Full=Lubricin; AltName: Full=Megakaryocyte-stimulating factor; AltName: Full=Superficial zone proteoglycan; Contains: RecName: Full=Proteoglycan 4 C-terminal part; Flags: Precursor [Homo sapiens] >gb|KAI2520717.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084243.1| proteoglycan 4 [Homo sapiens]
...
proteoglycan 4 isoform A preproprotein [Homo sapiens] >sp|Q92954.3| RecName: Full=Proteoglycan 4; AltName: Full=Lubricin; AltName: Full=Megakaryocyte-stimulating factor; AltName: Full=Superficial zone proteoglycan; Contains: RecName: Full=Proteoglycan 4 C-terminal part; Flags: Precursor [Homo sapiens] >gb|KAI2520717.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084243.1| proteoglycan 4 [Homo sapiens]
1404 aa protein
accession:NP_005798.3
proteoglycan 4 isoform E preproprotein o sapiens] >gb|KAI4084245.1| proteoglycan 4 [Homo sapiens]
...
proteoglycan 4 isoform E preproprotein [Homo sapiens] >gb|KAI2520718.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084245.1| proteoglycan 4 [Homo sapiens]
1361 aa protein
accession:NP_001290161.1
proteoglycan 4 isoform X11
...
proteoglycan 4 isoform X11 [Mus musculus]
1092 aa protein
accession:XP_036010444.1
proteoglycan 4 isoform X1
...
proteoglycan 4 isoform X1 [Danio rerio]
740 aa protein
accession:XP_005160745.1
proteoglycan 4 isoform B preproprotein o sapiens] >gb|KAI4084241.1| proteoglycan 4 [Homo sapiens]
...
proteoglycan 4 isoform B preproprotein [Homo sapiens] >gb|KAI2520720.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084241.1| proteoglycan 4 [Homo sapiens]
1363 aa protein
accession:NP_001121180.2
DOMAINS: and other(s) domains
...
dumpy, isoform S [Drosophila melanogaster] >gb|AGB92570.1| dumpy, isoform S [Drosophila melanogaster]
18641 aa protein
accession:NP_001260034.1
proteoglycan 4 isoform A preproprotein [Homo sapiens] >sp|Q92954.3| RecName: Full=Proteoglycan 4; AltName: Full=Lubricin; AltName: Full=Megakaryocyte-stimulating factor; AltName: Full=Superficial zone proteoglycan; Contains: RecName: Full=Proteoglycan 4 C-terminal part; Flags: Precursor [Homo sapiens] >gb|KAI2520717.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084243.1| proteoglycan 4 [Homo sapiens]
1404 aa protein
accession:NP_005798.3
proteoglycan 4 isoform E preproprotein [Homo sapiens] >gb|KAI2520718.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084245.1| proteoglycan 4 [Homo sapiens]
1361 aa protein
accession:NP_001290161.1
proteoglycan 4 isoform X11 [Mus musculus]
1092 aa protein
accession:XP_036010444.1
proteoglycan 4 isoform X1 [Danio rerio]
740 aa protein
accession:XP_005160745.1
proteoglycan 4 isoform B preproprotein [Homo sapiens] >gb|KAI2520720.1| proteoglycan 4 [Homo sapiens] >gb|KAI4084241.1| proteoglycan 4 [Homo sapiens]
1363 aa protein
accession:NP_001121180.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 2546 | 2546 | 100% | 0.0 | 96.94% | NP_001290161.1 | |
2 | 788 | 1678 | 83% | 0.0 | 62.91% | XP_036010444.1 | |
3 | 240 | 377 | 27% | 3e-65 | 48.52% | XP_005160745.1 | |
4 | 103 | 255 | 42% | 1e-20 | 23.54% | NP_001260034.1 | |
5 | 2528 | 2528 | 100% | 0.0 | 97.08% | NP_001121180.2 |