Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q86U86.1
RecName: Full=Protein polybromo-1; Short=hPB1; AltName: Full=BRG1-associated factor 180; Short=BAF180; AltName: Full=Polybromo-1D
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Query length:
1689 aa
DOMAINS: and other(s) domains
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RSC complex subunit Rsc4 Full=Chromatin structure-remodeling complex subunit rsc4; AltName: Full=Bromodomain-containing protein brd1; AltName: Full=RSC complex subunit rsc4 [Schizosaccharomyces pombe 972h-] >emb|CAA21309.1| RSC complex bromodomain subunit Rsc4 [Schizosaccharomyces pombe] >emb|CAA60444.1| bromodomain protein [Schizosaccharomyces pombe]
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RSC complex subunit Rsc4 [Schizosaccharomyces pombe] >sp|Q09948.1| RecName: Full=Chromatin structure-remodeling complex subunit rsc4; AltName: Full=Bromodomain-containing protein brd1; AltName: Full=RSC complex subunit rsc4 [Schizosaccharomyces pombe 972h-] >emb|CAA21309.1| RSC complex bromodomain subunit Rsc4 [Schizosaccharomyces pombe] >emb|CAA60444.1| bromodomain protein [Schizosaccharomyces pombe]
542 aa protein
accession:NP_595432.1
Bromo domain-containing protein containing protein [Caenorhabditis elegans]
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Bromo domain-containing protein [Caenorhabditis elegans] >emb|CAA96600.2| Bromo domain-containing protein [Caenorhabditis elegans]
1883 aa protein
accession:NP_001021008.1
polybromo 6339.1| polybromo [Drosophila melanogaster] >gb|AOQ03194.1| polybromo-RA, partial [synthetic construct] >gb|AOQ13727.1| polybromo-PA [synthetic construct]
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polybromo [Drosophila melanogaster] >gb|AAF56339.1| polybromo [Drosophila melanogaster] >gb|AOQ03194.1| polybromo-RA, partial [synthetic construct] >gb|AOQ13727.1| polybromo-PA [synthetic construct]
1654 aa protein
accession:NP_651288.1
protein polybromo-1 isoform X3
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protein polybromo-1 isoform X3 [Danio rerio]
1627 aa protein
accession:XP_009304062.1
Query: RecName: Full=Protein polybromo-1; Short=hPB1; AltName: Full=BRG1-associated factor 180; Short=BAF180; AltName: Full=Polybromo-1D
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RecName: Full=Protein polybromo-1; Short=hPB1; AltName: Full=BRG1-associated factor 180; Short=BAF180; AltName: Full=Polybromo-1D
1689 aa protein
accession:Q86U86.1
protein polybromo-1 isoform 1 partial [synthetic construct] >gb|AAI72736.1| Polybromo 1 [synthetic construct]
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protein polybromo-1 isoform 1 [Mus musculus] >gb|AAI72609.1| Polybromo 1, partial [synthetic construct] >gb|AAI72736.1| Polybromo 1 [synthetic construct]
1704 aa protein
accession:NP_001074720.1
DOMAINS: and other(s) domains
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RSC complex subunit Rsc4 [Schizosaccharomyces pombe] >sp|Q09948.1| RecName: Full=Chromatin structure-remodeling complex subunit rsc4; AltName: Full=Bromodomain-containing protein brd1; AltName: Full=RSC complex subunit rsc4 [Schizosaccharomyces pombe 972h-] >emb|CAA21309.1| RSC complex bromodomain subunit Rsc4 [Schizosaccharomyces pombe] >emb|CAA60444.1| bromodomain protein [Schizosaccharomyces pombe]
542 aa protein
accession:NP_595432.1
Bromo domain-containing protein [Caenorhabditis elegans] >emb|CAA96600.2| Bromo domain-containing protein [Caenorhabditis elegans]
1883 aa protein
accession:NP_001021008.1
polybromo [Drosophila melanogaster] >gb|AAF56339.1| polybromo [Drosophila melanogaster] >gb|AOQ03194.1| polybromo-RA, partial [synthetic construct] >gb|AOQ13727.1| polybromo-PA [synthetic construct]
1654 aa protein
accession:NP_651288.1
protein polybromo-1 isoform X3 [Danio rerio]
1627 aa protein
accession:XP_009304062.1
RecName: Full=Protein polybromo-1; Short=hPB1; AltName: Full=BRG1-associated factor 180; Short=BAF180; AltName: Full=Polybromo-1D
1689 aa protein
accession:Q86U86.1
protein polybromo-1 isoform 1 [Mus musculus] >gb|AAI72609.1| Polybromo 1, partial [synthetic construct] >gb|AAI72736.1| Polybromo 1 [synthetic construct]
1704 aa protein
accession:NP_001074720.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 3445 | 3445 | 100% | 0.0 | 97.30% | NP_001074720.1 | |
2 | 2412 | 2412 | 100% | 0.0 | 72.77% | XP_009304062.1 | |
3 | 834 | 897 | 92% | 0.0 | 36.85% | NP_651288.1 | |
4 | 468 | 1338 | 91% | 2e-135 | 30.52% | NP_001021008.1 | |
5 | 123 | 647 | 42% | 1e-27 | 31.44% | NP_595432.1 |